BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0094.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001353185.1| methyl-accepting chemotaxis protein [Janthin... 554 e-156 ref|YP_001100073.1| putative methyl-accepting chemotaxis protein... 541 e-152 ref|YP_003775427.1| methyl-accepting chemotaxis protein [Herbasp... 504 e-141 emb|CAM32673.2| methyl-accepting chemotaxis protein [Herbaspiril... 503 e-140 ref|ZP_08274886.1| methyl-accepting chemotaxis sensory transduce... 403 e-110 >ref|YP_001353185.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR88572.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 560 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 261/311 (83%), Positives = 285/311 (91%) Query: 1 VVAGEVRQLAQRTKEATDDIGAMVRSITEEAERASGGMQSLSAKVLEASQNVERVHGFLG 60 VVAGEVRQLAQRTKEATDDIGAMV +I EAERA+GGM +LS+KV+EASQNVERVH FL Sbjct: 215 VVAGEVRQLAQRTKEATDDIGAMVTAINVEAERAAGGMHALSSKVMEASQNVERVHEFLS 274 Query: 61 NIERSAGISEEEIQQIARASREHVETTHRIAEAILKIRDGMLATDIELPRVAASAMALSE 120 NIER+AG SEEEIQQIA ASREHVETTH+IA AILKIRDGMLATD ELPRVAASAMALSE Sbjct: 275 NIERAAGTSEEEIQQIAHASREHVETTHKIAAAILKIRDGMLATDTELPRVAASAMALSE 334 Query: 121 RAELVYDAIAASNAKTQHDDIQKVATAAAKRIGKLFEEAIGAGRISEAALFDRTYKPLPN 180 RAE VYDAIA S A TQHD+I+ VA+ AA RIGK+FEEAI GRIS ALFDR Y+P+PN Sbjct: 335 RAETVYDAIAESGAATQHDEIRMVASTAALRIGKVFEEAIANGRISRDALFDRNYRPVPN 394 Query: 181 TNPPKHTTQFDAFTDRVLPDVQEAILESMPQLAYAGAVDNNGYFPTHNKKFSKPLTGDYD 240 T+P KHTTQFDAFTDRVLP++QEAIL++MPQLAYAGAVD+NGYFPTHNKKFSKPLTGDYD Sbjct: 395 TSPAKHTTQFDAFTDRVLPEIQEAILDTMPQLAYAGAVDDNGYFPTHNKKFSKPLTGDYD 454 Query: 241 TDLVNNRTKRIFSDRTGKRCGANTKPFLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFRVG 300 DLVNNRTKRIF+DRTGKRCG+NTK FLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFR+G Sbjct: 455 VDLVNNRTKRIFTDRTGKRCGSNTKAFLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFRIG 514 Query: 301 YRSSQAQEAAP 311 YRSS A++AAP Sbjct: 515 YRSSSAEQAAP 525 >ref|YP_001100073.1| putative methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] emb|CAL61948.1| Putative chemotaxis sensory transducer precursor [Herminiimonas arsenicoxydans] Length = 550 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 253/304 (83%), Positives = 279/304 (91%) Query: 1 VVAGEVRQLAQRTKEATDDIGAMVRSITEEAERASGGMQSLSAKVLEASQNVERVHGFLG 60 VVAGEVRQLAQRTKEATDDIG+MVR+I EAERA+GGMQ+LS KV+EASQNV RVH FLG Sbjct: 217 VVAGEVRQLAQRTKEATDDIGSMVRAINVEAERAAGGMQALSGKVMEASQNVARVHEFLG 276 Query: 61 NIERSAGISEEEIQQIARASREHVETTHRIAEAILKIRDGMLATDIELPRVAASAMALSE 120 NIER+A SEEEIQQIARASREHVETTHRIA AIL+IRDGML TD ELPRVAASAM LSE Sbjct: 277 NIERAASTSEEEIQQIARASREHVETTHRIAAAILEIRDGMLETDTELPRVAASAMVLSE 336 Query: 121 RAELVYDAIAASNAKTQHDDIQKVATAAAKRIGKLFEEAIGAGRISEAALFDRTYKPLPN 180 RAE+VYDAIA S A TQHD I+ +AT AA +IG++F+EAI AGRI+ ALFDR Y+PLPN Sbjct: 337 RAEVVYDAIAESGADTQHDSIRMIATEAAHQIGRIFDEAIVAGRITREALFDRHYQPLPN 396 Query: 181 TNPPKHTTQFDAFTDRVLPDVQEAILESMPQLAYAGAVDNNGYFPTHNKKFSKPLTGDYD 240 T+PPKHTTQFDAFTDRVLP VQEAIL++MPQLAYAGAVD+NGYFPTHNKKFS+ LTG+YD Sbjct: 397 TSPPKHTTQFDAFTDRVLPTVQEAILDAMPQLAYAGAVDDNGYFPTHNKKFSQALTGNYD 456 Query: 241 TDLVNNRTKRIFSDRTGKRCGANTKPFLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFRVG 300 DLVNNRTKRIF+DRTGKRCG+NTKPFLLQTYKRDTGEVMHDLSVPIYV+GKHWGGFR+G Sbjct: 457 VDLVNNRTKRIFTDRTGKRCGSNTKPFLLQTYKRDTGEVMHDLSVPIYVDGKHWGGFRIG 516 Query: 301 YRSS 304 YRSS Sbjct: 517 YRSS 520 >ref|YP_003775427.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ63519.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 553 Score = 504 bits (1298), Expect = e-141, Method: Compositional matrix adjust. Identities = 245/321 (76%), Positives = 278/321 (86%), Gaps = 5/321 (1%) Query: 1 VVAGEVRQLAQRTKEATDDIGAMVRSITEEAERASGGMQSLSAKVLEASQNVERVHGFLG 60 VVAGEVRQLAQRTKEATDDIG MVR+ITEEAERA+ GM SLS++VLEA+QNVE+VHG L Sbjct: 223 VVAGEVRQLAQRTKEATDDIGTMVRAITEEAERAASGMNSLSSRVLEAAQNVEKVHGLLN 282 Query: 61 NIERSAGISEEEIQQIARASREHVETTHRIAEAILKIRDGMLATDIELPRVAASAMALSE 120 +IERSA S+E+I++IA ASREHV+TT IA+AI IR+GML TD ELPRVAASAM LSE Sbjct: 283 SIERSASQSQEQIEEIAVASREHVQTTQEIADAITDIRNGMLQTDTELPRVAASAMQLSE 342 Query: 121 RAELVYDAIAASNAKTQHDDIQKVATAAAKRIGKLFEEAIGAGRISEAALFDRTYKPLPN 180 RAE V++AI A+ HDDI+ A AA +GKLFEE+I AG I+EAALFDR YKP+PN Sbjct: 343 RAEAVFEAIVEGGARGGHDDIRIAAADAAAAVGKLFEESIRAGVITEAALFDRHYKPIPN 402 Query: 181 TNPPKHTTQFDAFTDRVLPDVQEAILESMPQLAYAGAVDNNGYFPTHNKKFSKPLTGDYD 240 T+P KH++QFDAFTDRVLP +QEA+LE MPQLAYAGAVDNNGYFPTHNKKFS+PLTG+YD Sbjct: 403 TSPQKHSSQFDAFTDRVLPAIQEALLERMPQLAYAGAVDNNGYFPTHNKKFSQPLTGNYD 462 Query: 241 TDLVNNRTKRIFSDRTGKRCGANTKPFLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFRVG 300 DLVNNRTKRIFSDRTGKRCG+NTKPFLLQTYKRDTGEVMHDLSVPI+V+GKHWGGFRVG Sbjct: 463 VDLVNNRTKRIFSDRTGKRCGSNTKPFLLQTYKRDTGEVMHDLSVPIHVHGKHWGGFRVG 522 Query: 301 YRSSQAQEAAPVQAVAATSPA 321 YRSS AP AV AT+PA Sbjct: 523 YRSSH----APAPAV-ATTPA 538 >emb|CAM32673.2| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae] Length = 553 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 245/321 (76%), Positives = 276/321 (85%), Gaps = 5/321 (1%) Query: 1 VVAGEVRQLAQRTKEATDDIGAMVRSITEEAERASGGMQSLSAKVLEASQNVERVHGFLG 60 VVAGEVRQLAQRTKEATDDIG MVR+ITEEAERA GM SLS++VLEA QNVE+VHG L Sbjct: 223 VVAGEVRQLAQRTKEATDDIGTMVRAITEEAERADSGMNSLSSRVLEAGQNVEKVHGLLN 282 Query: 61 NIERSAGISEEEIQQIARASREHVETTHRIAEAILKIRDGMLATDIELPRVAASAMALSE 120 +IERSA S+E+I++IA ASREHV+TT IA+AI IR+GML TD ELPRVAASAM LSE Sbjct: 283 SIERSASQSQEQIEEIAVASREHVQTTQEIADAITDIRNGMLQTDTELPRVAASAMQLSE 342 Query: 121 RAELVYDAIAASNAKTQHDDIQKVATAAAKRIGKLFEEAIGAGRISEAALFDRTYKPLPN 180 RAE V++AI A+ HDDI+ A AA +GKLFEE+I AG I+EAALFDR YKP+PN Sbjct: 343 RAEAVFEAIVEGGARGGHDDIRIAAADAAAAVGKLFEESIRAGVITEAALFDRHYKPIPN 402 Query: 181 TNPPKHTTQFDAFTDRVLPDVQEAILESMPQLAYAGAVDNNGYFPTHNKKFSKPLTGDYD 240 T+P KH++QFDAFTDRVLP +QEA+LE MPQLAYAGAVDNNGYFPTHNKKFS+PLTG+YD Sbjct: 403 TSPQKHSSQFDAFTDRVLPAIQEALLERMPQLAYAGAVDNNGYFPTHNKKFSQPLTGNYD 462 Query: 241 TDLVNNRTKRIFSDRTGKRCGANTKPFLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFRVG 300 DLVNNRTKRIFSDRTGKRCG+NTKPFLLQTYKRDTGEVMHDLSVPI+V+GKHWGGFRVG Sbjct: 463 VDLVNNRTKRIFSDRTGKRCGSNTKPFLLQTYKRDTGEVMHDLSVPIHVHGKHWGGFRVG 522 Query: 301 YRSSQAQEAAPVQAVAATSPA 321 YRSS AP AV AT+PA Sbjct: 523 YRSSH----APAPAV-ATTPA 538 >ref|ZP_08274886.1| methyl-accepting chemotaxis sensory transducer [Oxalobacteraceae bacterium IMCC9480] gb|EGF31637.1| methyl-accepting chemotaxis sensory transducer [Oxalobacteraceae bacterium IMCC9480] Length = 518 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/305 (63%), Positives = 237/305 (77%) Query: 1 VVAGEVRQLAQRTKEATDDIGAMVRSITEEAERASGGMQSLSAKVLEASQNVERVHGFLG 60 VVAGEVRQLAQRT AT +IG MVR I ++A A+ GM +L+ +V A+ V V+ L Sbjct: 212 VVAGEVRQLAQRTHLATGEIGTMVREINQQALLAANGMTALNRRVSGAASEVGVVNLSLV 271 Query: 61 NIERSAGISEEEIQQIARASREHVETTHRIAEAILKIRDGMLATDIELPRVAASAMALSE 120 NIER+A +EEE++QIA ASRE V T+ ++ AI IRD M+AT+ +LP AA+AM LSE Sbjct: 272 NIERAATTAEEEVRQIAAASREQVGTSREVSSAIADIRDSMMATETDLPAAAAAAMRLSE 331 Query: 121 RAELVYDAIAASNAKTQHDDIQKVATAAAKRIGKLFEEAIGAGRISEAALFDRTYKPLPN 180 R E ++DA++ S A TQHD I++ A AA +IG L + A+ G+I+ ALFDR Y + Sbjct: 332 RGEAIFDALSQSQAVTQHDAIREAARLAAGQIGALMDNAVAQGQITREALFDRRYVAIAR 391 Query: 181 TNPPKHTTQFDAFTDRVLPDVQEAILESMPQLAYAGAVDNNGYFPTHNKKFSKPLTGDYD 240 TNPPKH++ FD +TDR P +QEA+L++MPQLAYAGAVD NGYFPTHNKKFS+PLTGDYD Sbjct: 392 TNPPKHSSAFDTYTDRAFPALQEALLQAMPQLAYAGAVDTNGYFPTHNKKFSQPLTGDYD 451 Query: 241 TDLVNNRTKRIFSDRTGKRCGANTKPFLLQTYKRDTGEVMHDLSVPIYVNGKHWGGFRVG 300 DLVNNRTKRIF+DRTGKRCGA+T FLLQTYKRDTGEVMHDLSVPI V GKHWGGFR+G Sbjct: 452 IDLVNNRTKRIFTDRTGKRCGASTSAFLLQTYKRDTGEVMHDLSVPILVGGKHWGGFRIG 511 Query: 301 YRSSQ 305 YRS+Q Sbjct: 512 YRSAQ 516