BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0087.p         (115 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775431.1| CheY chemotaxis protein [Herbaspirillum sero...   225   1e-57
ref|YP_001099607.1| chemotactic response regulator [Herminiimona...   216   1e-54
ref|YP_001353780.1| CheY chemotaxis protein [Janthinobacterium s...   211   4e-53
ref|YP_546037.1| response regulator receiver domain-containing p...   206   7e-52
ref|YP_003050594.1| response regulator receiver protein [Methylo...   204   3e-51

>ref|YP_003775431.1| CheY chemotaxis protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63523.1| CheY chemotaxis protein [Herbaspirillum seropedicae SmR1]
          Length = 131

 Score =  225 bits (574), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 110/115 (95%), Positives = 112/115 (97%)

Query: 1   MRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNMPNMDGLTMLQEIRKDP 60
           MRRIVRNLLKELGYTNVDEAEDGVQ LQKLRSD FDFVVSDWNMPNMDGLTMLQEIRKDP
Sbjct: 17  MRRIVRNLLKELGYTNVDEAEDGVQALQKLRSDQFDFVVSDWNMPNMDGLTMLQEIRKDP 76

Query: 61  ALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKLEAGG 115
           AL+KLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEK+ AGG
Sbjct: 77  ALSKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKMAAGG 131


>ref|YP_001099607.1| chemotactic response regulator [Herminiimonas arsenicoxydans]
 emb|CAL61480.1| Chemotaxis protein CheY [Herminiimonas arsenicoxydans]
          Length = 132

 Score =  216 bits (549), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/115 (90%), Positives = 108/115 (93%)

Query: 1   MRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNMPNMDGLTMLQEIRKDP 60
           MRRIVRNLLKELGYTNVDEAEDGV  L KLRS+TFDFVVSDWNMPNMDGLTMLQ+IR DP
Sbjct: 17  MRRIVRNLLKELGYTNVDEAEDGVMALSKLRSETFDFVVSDWNMPNMDGLTMLQQIRADP 76

Query: 61  ALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKLEAGG 115
           AL+KLPVLMVTAEAKKENI+AAAQAGANGYVVKPFTAATLDEKL KIFEKL A G
Sbjct: 77  ALSKLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLAKIFEKLAAAG 131


>ref|YP_001353780.1| CheY chemotaxis protein [Janthinobacterium sp. Marseille]
 gb|ABR88844.1| CheY chemotaxis protein [Janthinobacterium sp. Marseille]
          Length = 132

 Score =  211 bits (536), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 102/115 (88%), Positives = 105/115 (91%)

Query: 1   MRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNMPNMDGLTMLQEIRKDP 60
           MRRIVRNLLKELGYTNVDEAEDG   L KLRS+ FDFVVSDWNMPNMDGLTMLQ IR DP
Sbjct: 17  MRRIVRNLLKELGYTNVDEAEDGAMALAKLRSEQFDFVVSDWNMPNMDGLTMLQHIRADP 76

Query: 61  ALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKLEAGG 115
           AL+KLPVLMVTAEAKKENI+AAAQAGANGYVVKPFTAATLDEKL KIFEKL A G
Sbjct: 77  ALSKLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLAKIFEKLAAAG 131


>ref|YP_546037.1| response regulator receiver domain-containing protein
           [Methylobacillus flagellatus KT]
 gb|ABE50196.1| response regulator receiver domain protein (CheY-like)
           [Methylobacillus flagellatus KT]
          Length = 132

 Score =  206 bits (525), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 100/115 (86%), Positives = 105/115 (91%)

Query: 1   MRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNMPNMDGLTMLQEIRKDP 60
           MRRIVRNLLKELGY NVDEAEDGV  L KLRS +FDFVVSDWNMPNMDGLTMLQ+IR DP
Sbjct: 17  MRRIVRNLLKELGYNNVDEAEDGVMALAKLRSGSFDFVVSDWNMPNMDGLTMLQQIRADP 76

Query: 61  ALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKLEAGG 115
           AL+ LPVLMVTAEAKKENI+AAAQAGA+GYVVKPFTAATLDEKL KIFEKLE  G
Sbjct: 77  ALSSLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLDEKLSKIFEKLEKAG 131


>ref|YP_003050594.1| response regulator receiver protein [Methylovorus glucosetrophus
           SIP3-4]
 ref|YP_004039267.1| response regulator receiver protein [Methylovorus sp. MP688]
 gb|ACT50067.1| response regulator receiver protein [Methylovorus glucosetrophus
           SIP3-4]
 gb|ADQ84031.1| response regulator receiver protein [Methylovorus sp. MP688]
          Length = 132

 Score =  204 bits (519), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 99/115 (86%), Positives = 103/115 (89%)

Query: 1   MRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNMPNMDGLTMLQEIRKDP 60
           MRRIVRNLLKELGYTNVDEAEDGV  L KLR   F+FVVSDWNMPNMDGLTML+EIR DP
Sbjct: 17  MRRIVRNLLKELGYTNVDEAEDGVMALSKLRGGNFEFVVSDWNMPNMDGLTMLKEIRADP 76

Query: 61  ALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIFEKLEAGG 115
            L+ LPVLMVTAEAKKENI+AAAQAGANGYVVKPFTAATLDEKL KIFEKLE  G
Sbjct: 77  TLSSLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLAKIFEKLEKSG 131