BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0082.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775436.1| antiactivator of flagellar biosynthesis FleN... 336 2e-90 ref|XP_002539016.1| conserved hypothetical protein [Ricinus comm... 285 6e-75 ref|YP_001099613.1| MotR [Herminiimonas arsenicoxydans] >gi|1337... 241 9e-62 ref|ZP_08273914.1| Flagellar synthesis regulator FleN [Oxalobact... 221 1e-55 ref|XP_002538550.1| conserved hypothetical protein [Ricinus comm... 213 2e-53 >ref|YP_003775436.1| antiactivator of flagellar biosynthesis FleN protein [Herbaspirillum seropedicae SmR1] gb|ADJ63528.1| antiactivator of flagellar biosynthesis FleN protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 161/266 (60%), Positives = 218/266 (81%), Gaps = 1/266 (0%) Query: 1 MLERPTPRVFTFFSVLPDDEKGAMLINLAASLAAADHNALLVDACMTPSVILSRFG-GIA 59 MLERP PR+FTFFSVL +++K AMLINLAASLA A H+ L++D + + +L+R G Sbjct: 1 MLERPVPRLFTFFSVLAEEDKSAMLINLAASLAQAKHSVLVIDGDVATTGLLTRIGLRHD 60 Query: 60 VATLLDVARQERHLDEAVRMVPEGFALARLSRKNVSASTHPQASRLAQIFDGLTEESDIT 119 VATL +VAR ER EA RM+PEGF++AR++R++V +++ PQA +LA+IFD L E+++IT Sbjct: 61 VATLQEVARMERAPREATRMLPEGFSMARIARRSVPSASDPQAGQLAEIFDSLIEQAEIT 120 Query: 120 LINGELNDDELLPVPAMEMGEIVVHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVSGGS 179 L+NG L+ D+ LPVP MEMGEIV+ +ST+ +SIKAAYVLLK LSD++GRRPF+L+V+ + Sbjct: 121 LVNGVLSADQSLPVPTMEMGEIVIQVSTTASSIKAAYVLLKSLSDRIGRRPFSLIVNDAT 180 Query: 180 DAEAQMVYANMAQAANRYLAAQLHFMGSIPADEHIRRASGQGRTVLEAFPLAGATLAFKR 239 +AEA+ VYANMAQAA+RYLAAQL+++G+IPAD+HIRRA+GQGR V++ FP A A LAF+R Sbjct: 181 EAEARTVYANMAQAASRYLAAQLNYLGAIPADDHIRRATGQGRAVMDVFPFATAALAFQR 240 Query: 240 LADQFSLSNLTKGTYGMATDGASLGV 265 L+ +F+ + + TYGMATDGASLGV Sbjct: 241 LSKKFTAAESARSTYGMATDGASLGV 266 >ref|XP_002539016.1| conserved hypothetical protein [Ricinus communis] gb|EEF23367.1| conserved hypothetical protein [Ricinus communis] Length = 230 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 137/223 (61%), Positives = 186/223 (83%), Gaps = 1/223 (0%) Query: 1 MLERPTPRVFTFFSVLPDDEKGAMLINLAASLAAADHNALLVDACMTPSVILSRFG-GIA 59 MLERP PR+FTFFSVL +++K AMLINLAASLA A H+ L++D + + +L+R G Sbjct: 7 MLERPVPRLFTFFSVLGEEDKSAMLINLAASLAQAKHSVLVIDGDVATTGLLTRIGLRHD 66 Query: 60 VATLLDVARQERHLDEAVRMVPEGFALARLSRKNVSASTHPQASRLAQIFDGLTEESDIT 119 VATL +VAR ER EA RM+PEGF++AR++R++V +++ PQA +LA+IFD L E+++IT Sbjct: 67 VATLQEVARMERAPREATRMLPEGFSMARIARRSVPSASDPQAGQLAEIFDSLIEQAEIT 126 Query: 120 LINGELNDDELLPVPAMEMGEIVVHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVSGGS 179 L+NG L+ D+ LPVP MEMGEIV+ +ST+ +SIKAAYVLLK LSD++GRRPF+L+V+ + Sbjct: 127 LVNGVLSADQSLPVPTMEMGEIVIQVSTTASSIKAAYVLLKSLSDRIGRRPFSLIVNDAT 186 Query: 180 DAEAQMVYANMAQAANRYLAAQLHFMGSIPADEHIRRASGQGR 222 +AEA+ VYANMAQAA+RYLAAQL+++G+IPAD+HIRRA+GQGR Sbjct: 187 EAEARTVYANMAQAASRYLAAQLNYLGAIPADDHIRRATGQGR 229 >ref|YP_001099613.1| MotR [Herminiimonas arsenicoxydans] emb|CAL61486.1| putative Antiactivator of flagellar biosynthesis FleN [Herminiimonas arsenicoxydans] Length = 271 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 121/249 (48%), Positives = 175/249 (70%), Gaps = 2/249 (0%) Query: 1 MLERPTPRVFTFFSVLPDDEKGAMLINLAASLAAADHNALLVDACMTPSVILSRFGGIAV 60 ML P PR+FTF S +K AML+NL+ASLA+ + +L+DAC + I R G Sbjct: 15 MLAGPKPRIFTFLSATSVADKSAMLVNLSASLASGGSDVVLLDACTSTDGITRRMGADMQ 74 Query: 61 ATLLDVARQERHLDEAVRMVPEGFALARLSRKNVSASTHP--QASRLAQIFDGLTEESDI 118 ATLLDVARQ+R L++ V+ +P+GF LA L+ +V A++ Q RL+ F L +SD+ Sbjct: 75 ATLLDVARQQRALNQVVQAMPQGFGLASLTSGSVHAASRDADQLRRLSNAFGVLAAQSDV 134 Query: 119 TLINGELNDDELLPVPAMEMGEIVVHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVSGG 178 +++ EL+ D+ P+P M G+IVV ++ + SIK AY L+K L+ +LGRRPF +LV+G Sbjct: 135 LVVDAELDQDDNFPIPGMASGDIVVQVAPAAASIKEAYSLIKRLNAQLGRRPFGILVTGA 194 Query: 179 SDAEAQMVYANMAQAANRYLAAQLHFMGSIPADEHIRRASGQGRTVLEAFPLAGATLAFK 238 + EA +VY NMAQAA+RYLA QL F+GSIP+D+H+ RA+ GR V++AFP+AGA++AF+ Sbjct: 195 DEREAHIVYQNMAQAASRYLAVQLQFIGSIPSDDHLTRAARLGRAVIDAFPMAGASVAFR 254 Query: 239 RLADQFSLS 247 LA++F+LS Sbjct: 255 LLAERFALS 263 >ref|ZP_08273914.1| Flagellar synthesis regulator FleN [Oxalobacteraceae bacterium IMCC9480] gb|EGF32615.1| Flagellar synthesis regulator FleN [Oxalobacteraceae bacterium IMCC9480] Length = 274 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 120/247 (48%), Positives = 171/247 (69%), Gaps = 2/247 (0%) Query: 1 MLERPTPRVFTFFSVLPDDEKGAMLINLAASLAAADHNALLVDACMTPSVILSRFGGIAV 60 ML P PRV +F S L +EK L+NLAASL + LL+DAC + + +R G Sbjct: 15 MLAGPKPRVVSFVSALGTEEKSGTLVNLAASLTRTGSDVLLLDACSASNGLANRLGAARA 74 Query: 61 ATLLDVARQERHLDEAVRMVPEGFALARLSRKNVSASTHP--QASRLAQIFDGLTEESDI 118 ATL+ VARQER L+E V+ + +GF +A L+R+N+ + QA RL+ F L + DI Sbjct: 75 ATLMQVARQERGLNEVVQTLAQGFGVATLARENLRSVMQDVDQARRLSNAFGVLATQHDI 134 Query: 119 TLINGELNDDELLPVPAMEMGEIVVHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVSGG 178 L++ EL+ D+ +PAM+ GEIVV +S+S +SI AAY ++K LS +LGRRPF +LV+G Sbjct: 135 VLVDAELDGDDSFVLPAMQRGEIVVQVSSSGSSITAAYAIIKRLSAQLGRRPFGILVTGA 194 Query: 179 SDAEAQMVYANMAQAANRYLAAQLHFMGSIPADEHIRRASGQGRTVLEAFPLAGATLAFK 238 S+ EAQ V+ANMAQAA+RYLA +L +GS+P D ++RA+ GR+V++AFP+A A++AF+ Sbjct: 195 SEREAQQVFANMAQAASRYLALELTSIGSVPVDADLKRAAQLGRSVIDAFPMALASVAFR 254 Query: 239 RLADQFS 245 RLA QF+ Sbjct: 255 RLAGQFA 261 >ref|XP_002538550.1| conserved hypothetical protein [Ricinus communis] gb|EEF23832.1| conserved hypothetical protein [Ricinus communis] Length = 231 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 110/230 (47%), Positives = 161/230 (70%), Gaps = 3/230 (1%) Query: 24 MLINLAASLAAADHNALLVDACMTPSVILSRFGGIAVATLLDVARQERHLDEAVRMVPEG 83 ML+NL ASLA + ++ ++VDAC + R G +LL VARQE L++ + VP+G Sbjct: 1 MLVNLGASLAQSGNDVMIVDACTRDYGVAQRLGVDRGPSLLQVARQECALNQVIHPVPQG 60 Query: 84 FALARLSRKNVSASTHPQASRLAQIFDGLTEES-DITLINGELNDDELLPVPAMEMGEIV 142 F++A ++R +AS+ +A RLA+ FD L +++ I +++GE ++D PVP M EIV Sbjct: 61 FSVATMAR--TTASSADEARRLAKTFDVLVKQAGSIIMVDGEFSEDGTFPVPIMASSEIV 118 Query: 143 VHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVSGGSDAEAQMVYANMAQAANRYLAAQL 202 V +STS TSI AY L+K LS LGRRPF +LV+G ++AEA++VY NM+ AA RYLA L Sbjct: 119 VQVSTSATSITNAYALIKRLSQHLGRRPFGILVTGATEAEAKVVYDNMSSAATRYLAVTL 178 Query: 203 HFMGSIPADEHIRRASGQGRTVLEAFPLAGATLAFKRLADQFSLSNLTKG 252 MGS+PADE++ RA+ GR V++AFPLAGA++AF+RLA +F+ + + +G Sbjct: 179 SSMGSVPADEYLHRAARLGRAVVDAFPLAGASVAFRRLAGRFARTGVQQG 228