BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0080.p (248 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_546057.1| MotA/TolQ/ExbB proton channel [Methylobacillus ... 314 6e-84 emb|CAL61488.2| Motility protein A [Herminiimonas arsenicoxydans] 305 6e-81 ref|YP_004294288.1| MotA/TolQ/ExbB proton channel [Nitrosomonas ... 298 3e-79 ref|YP_003674656.1| MotA/TolQ/ExbB proton channel [Methylotenera... 296 1e-78 ref|ZP_08273912.1| Flagellar motor rotation protein MotA [Oxalob... 293 2e-77 >ref|YP_546057.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT] gb|ABE50216.1| MotA/TolQ/ExbB proton channel [Methylobacillus flagellatus KT] Length = 246 Score = 314 bits (805), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 152/245 (62%), Positives = 185/245 (75%) Query: 1 VDWSSVGGLLLALGGILLGLLLEGGHLGSILQPTAFLIVFAGTIGAVLLQTRLDNFVHGV 60 +DWSS+GG+LLAL GIL+G LEGG S++QP AF+IV GTIGAVLLQTR F+ G+ Sbjct: 1 MDWSSLGGILLALAGILIGQALEGGKFSSLIQPAAFMIVLFGTIGAVLLQTRPVFFIQGI 60 Query: 61 KLLSWVFSPPVHNHRKLIDNITVWSGISRREGLLHLEEHMNDSSDPFVKKGLRLLIDGIT 120 +LL WV PP + KL IT WS I+R++G+L LE HM DPFVK LRL+IDG Sbjct: 61 RLLQWVVFPPQDDREKLARRITSWSQIARKDGILLLENHMYSEQDPFVKTALRLVIDGTP 120 Query: 121 PAKLLDILEVDTTAYETRQRQALKIWEAAGGYSPTIGILGAVLGLIHVMENLSDPAKLGG 180 P K+ DI VD YE QR A+KIWEAAGGY+PTIGILGAVLGLIHVMENLSDP KLG Sbjct: 121 PEKIRDICNVDINRYEAAQRNAVKIWEAAGGYAPTIGILGAVLGLIHVMENLSDPGKLGS 180 Query: 181 GIAVAFVATIYGVGLANLFFLPVANKLKELLAVEVNRRDMVADSLFGIASGDNPRVIQER 240 GIA+AFVATIYGVG ANL FLP+ANKLK L+ ++ RR+MV + + GIA+G+N ++I+ER Sbjct: 181 GIAIAFVATIYGVGFANLLFLPIANKLKALVQLQTTRREMVVEGVVGIANGENHKIIEER 240 Query: 241 AESYF 245 +Y Sbjct: 241 LNAYL 245 >emb|CAL61488.2| Motility protein A [Herminiimonas arsenicoxydans] Length = 246 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 148/246 (60%), Positives = 195/246 (79%) Query: 1 VDWSSVGGLLLALGGILLGLLLEGGHLGSILQPTAFLIVFAGTIGAVLLQTRLDNFVHGV 60 +DW S+ G++LALGGIL G +LEGG LGS++QP AF+IV GTIGAVLLQ+ NF +G+ Sbjct: 1 MDWGSLIGIVLALGGILAGQMLEGGKLGSLVQPAAFIIVIVGTIGAVLLQSGWRNFANGL 60 Query: 61 KLLSWVFSPPVHNHRKLIDNITVWSGISRREGLLHLEEHMNDSSDPFVKKGLRLLIDGIT 120 K+ VF P N+ L+ ++T WS ++RREGLL LE + D +DPFV GLRL++DG+ Sbjct: 61 KMAGRVFVPQDDNYASLMHDVTNWSTVARREGLLSLERMIKDVNDPFVAHGLRLIVDGVD 120 Query: 121 PAKLLDILEVDTTAYETRQRQALKIWEAAGGYSPTIGILGAVLGLIHVMENLSDPAKLGG 180 P KL ++L+++ AYET+QR ++KIWEAAGGY+PTIGILGAVLGLIHVMENLSDP++LG Sbjct: 121 PHKLREVLDMEIGAYETQQRLSIKIWEAAGGYAPTIGILGAVLGLIHVMENLSDPSRLGS 180 Query: 181 GIAVAFVATIYGVGLANLFFLPVANKLKELLAVEVNRRDMVADSLFGIASGDNPRVIQER 240 GIAVAFVATIYGVG ANL FLP+++KLK ++ +V R +M+AD+ GIA+GDNPR+I+ER Sbjct: 181 GIAVAFVATIYGVGFANLVFLPISSKLKAIVNRDVFRHEMLADAFAGIAAGDNPRLIEER 240 Query: 241 AESYFV 246 Y + Sbjct: 241 MNIYLM 246 >ref|YP_004294288.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212] gb|ADZ26126.1| MotA/TolQ/ExbB proton channel [Nitrosomonas sp. AL212] Length = 252 Score = 298 bits (764), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 147/246 (59%), Positives = 190/246 (77%) Query: 1 VDWSSVGGLLLALGGILLGLLLEGGHLGSILQPTAFLIVFAGTIGAVLLQTRLDNFVHGV 60 +D +SV G++LA I+ G LEGGH+GS+LQ AFLIV GTIGAVLLQ+ + FV+GV Sbjct: 7 MDVNSVAGIVLAFVAIIGGQFLEGGHVGSLLQVAAFLIVMGGTIGAVLLQSPVKVFVNGV 66 Query: 61 KLLSWVFSPPVHNHRKLIDNITVWSGISRREGLLHLEEHMNDSSDPFVKKGLRLLIDGIT 120 K++SWVF PP ++ + LI + WS ISR+EG+L LE ++ + D F KKGL+LL DG T Sbjct: 67 KMVSWVFYPPENSPQILIKQVVNWSNISRKEGMLALESYIPAAKDAFSKKGLQLLADGST 126 Query: 121 PAKLLDILEVDTTAYETRQRQALKIWEAAGGYSPTIGILGAVLGLIHVMENLSDPAKLGG 180 P KL ++LE+D TA ET QRQ+ +IWEAAGGY+PTIGILGAVLGLIHVMENLSDP+ LG Sbjct: 127 PEKLREVLEIDITALETHQRQSARIWEAAGGYAPTIGILGAVLGLIHVMENLSDPSLLGS 186 Query: 181 GIAVAFVATIYGVGLANLFFLPVANKLKELLAVEVNRRDMVADSLFGIASGDNPRVIQER 240 GIAVAFVATIYGVGLANL FLP++NKLK ++ V ++M+ D IA+G+NPR+I+ R Sbjct: 187 GIAVAFVATIYGVGLANLVFLPISNKLKNIIGEHVVMQEMLMDGFVAIANGENPRLIESR 246 Query: 241 AESYFV 246 + Y++ Sbjct: 247 LKGYYI 252 >ref|YP_003674656.1| MotA/TolQ/ExbB proton channel [Methylotenera versatilis 301] gb|ADI30079.1| MotA/TolQ/ExbB proton channel [Methylotenera versatilis 301] Length = 246 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 139/245 (56%), Positives = 189/245 (77%) Query: 1 VDWSSVGGLLLALGGILLGLLLEGGHLGSILQPTAFLIVFAGTIGAVLLQTRLDNFVHGV 60 +DWSS+GGL+LAL GILLG +EGG + S++QP A LIV GT GAVLLQ+ +F+ G+ Sbjct: 1 MDWSSLGGLVLALIGILLGQAIEGGQISSLIQPAALLIVMCGTFGAVLLQSNTASFIAGL 60 Query: 61 KLLSWVFSPPVHNHRKLIDNITVWSGISRREGLLHLEEHMNDSSDPFVKKGLRLLIDGIT 120 K++ VFSPP+ + + L + I +WS +R+EG+ LE ++ +DPF++KGL+L+IDG Sbjct: 61 KMVRQVFSPPLDDRQALANRIILWSNFARKEGIFMLETYLKKETDPFIQKGLKLMIDGTP 120 Query: 121 PAKLLDILEVDTTAYETRQRQALKIWEAAGGYSPTIGILGAVLGLIHVMENLSDPAKLGG 180 P K+ ++ +D +E ++R A KIW AAGGY+PT+GILGAVLGLIHVMENLSDP++LG Sbjct: 121 PEKIRQVIAIDMHFFEIQERNAAKIWSAAGGYAPTVGILGAVLGLIHVMENLSDPSRLGS 180 Query: 181 GIAVAFVATIYGVGLANLFFLPVANKLKELLAVEVNRRDMVADSLFGIASGDNPRVIQER 240 GIAVAFVATIYGVGLANL FLPV+NKLK L+ E+ RR+M+ ++ IASGD+PRV++ER Sbjct: 181 GIAVAFVATIYGVGLANLVFLPVSNKLKSLIQHEMMRREMLLNAWVSIASGDHPRVVEER 240 Query: 241 AESYF 245 +Y Sbjct: 241 LLAYL 245 >ref|ZP_08273912.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium IMCC9480] gb|EGF32613.1| Flagellar motor rotation protein MotA [Oxalobacteraceae bacterium IMCC9480] Length = 246 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 148/244 (60%), Positives = 185/244 (75%) Query: 1 VDWSSVGGLLLALGGILLGLLLEGGHLGSILQPTAFLIVFAGTIGAVLLQTRLDNFVHGV 60 +DW SV GL+LAL GIL+G LLEGG LGS++QPTAF+IV GT GAVLLQ+ GV Sbjct: 1 MDWGSVAGLVLALLGILVGQLLEGGRLGSLVQPTAFVIVMVGTFGAVLLQSGWPTVKRGV 60 Query: 61 KLLSWVFSPPVHNHRKLIDNITVWSGISRREGLLHLEEHMNDSSDPFVKKGLRLLIDGIT 120 ++ + F HR ++ +WS +RREGLL LE M++S DPF+ KGLRLL DGI Sbjct: 61 RMAAAAFRNQPDLHRLHAADVAMWSQTARREGLLSLERFMDNSDDPFITKGLRLLTDGID 120 Query: 121 PAKLLDILEVDTTAYETRQRQALKIWEAAGGYSPTIGILGAVLGLIHVMENLSDPAKLGG 180 P KL +IL ++ ++YETR+R+A +IW+AAGGY+PTIGILGAVLGLIHVMENLSDP++LG Sbjct: 121 PYKLREILGIEISSYETRERKAARIWDAAGGYAPTIGILGAVLGLIHVMENLSDPSRLGA 180 Query: 181 GIAVAFVATIYGVGLANLFFLPVANKLKELLAVEVNRRDMVADSLFGIASGDNPRVIQER 240 GIAVAFVATIYGVGLANL FLP+ KLK + EV R +M+AD+ IASGDNP I+ER Sbjct: 181 GIAVAFVATIYGVGLANLVFLPIGGKLKTAVNDEVTRLEMLADAFCCIASGDNPISIEER 240 Query: 241 AESY 244 ++Y Sbjct: 241 MKAY 244