BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0068.p         (180 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775448.1| flagellar basal-body P-ring protein [Herbasp...   233   7e-60
ref|ZP_08272759.1| Flagellar P-ring protein flgI [Oxalobacterace...   231   5e-59
ref|YP_003048379.1| flagellar P-ring protein [Methylotenera mobi...   230   6e-59
ref|YP_001100168.1| flagellar basal body P-ring protein [Hermini...   224   5e-57
ref|YP_001353115.1| flagellar basal body P-ring protein [Janthin...   223   9e-57

>ref|YP_003775448.1| flagellar basal-body P-ring protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63540.1| flagellar basal-body P-ring protein [Herbaspirillum seropedicae
           SmR1]
          Length = 376

 Score =  233 bits (595), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 115/126 (91%), Positives = 121/126 (96%)

Query: 35  ERLKDLASIQGVRQNQLVGYGLAVGLDGSGDQTTQTPFTVQSVISMLQQLGVNLPSTSTS 94
           ERLKDLASIQGVRQNQLVGYGL VGLDGSGDQTTQTPFTVQSVISMLQQLGVN+P+ ++S
Sbjct: 30  ERLKDLASIQGVRQNQLVGYGLVVGLDGSGDQTTQTPFTVQSVISMLQQLGVNVPTGTSS 89

Query: 95  NMQLKNVAAVMVTTSLPAFAQPGQTLDVTVSSIGNAKSIRGGTLLMAPLKGADGQIYAIA 154
           NMQLKNVAA MVT +LPAFAQPGQ +DVTVSSIGNAKSIRGGTLLMAPLKGADGQIYAIA
Sbjct: 90  NMQLKNVAAAMVTANLPAFAQPGQLIDVTVSSIGNAKSIRGGTLLMAPLKGADGQIYAIA 149

Query: 155 QGNIVV 160
           QGNIVV
Sbjct: 150 QGNIVV 155


>ref|ZP_08272759.1| Flagellar P-ring protein flgI [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33758.1| Flagellar P-ring protein flgI [Oxalobacteraceae bacterium IMCC9480]
          Length = 251

 Score =  231 bits (588), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/145 (79%), Positives = 130/145 (89%), Gaps = 2/145 (1%)

Query: 15  RLATMLVAAACLLSAGVSHAERLKDLASIQGVRQNQLVGYGLAVGLDGSGDQTTQTPFTV 74
           R+   L  AA L SA  +HAERLKDLASIQGVRQNQL+GYGL VGLDGSGDQTTQTPFTV
Sbjct: 8   RIFLALTCAASLCSAPAAHAERLKDLASIQGVRQNQLLGYGLVVGLDGSGDQTTQTPFTV 67

Query: 75  QSVISMLQQLGVNLPSTSTSNMQLKNVAAVMVTTSLPAFAQPGQTLDVTVSSIGNAKSIR 134
           QSVISMLQ +GVNLP+ +T  +QLKNVAAVMVTTSLPAFA+PGQTLD+TVSS+GNAKS+R
Sbjct: 68  QSVISMLQGMGVNLPAATT--LQLKNVAAVMVTTSLPAFARPGQTLDITVSSMGNAKSLR 125

Query: 135 GGTLLMAPLKGADGQIYAIAQGNIV 159
           GGTLLM PLKGADGQIYA+AQG+++
Sbjct: 126 GGTLLMTPLKGADGQIYAMAQGSLI 150


>ref|YP_003048379.1| flagellar P-ring protein [Methylotenera mobilis JLW8]
 gb|ACT47852.1| flagellar P-ring protein [Methylotenera mobilis JLW8]
          Length = 390

 Score =  230 bits (587), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 118/154 (76%), Positives = 138/154 (89%), Gaps = 4/154 (2%)

Query: 16  LATMLVAAACL--LSAGVSHAERLKDLASIQGVRQNQLVGYGLAVGLDGSGDQTTQTPFT 73
           L  +L+A+  L   +A V+HAERLKDLASIQGVR NQL+GYGL VGLDG+GDQT QTPFT
Sbjct: 26  LPCLLLASTVLSITTAPVAHAERLKDLASIQGVRSNQLIGYGLVVGLDGTGDQTVQTPFT 85

Query: 74  VQSVISMLQQLGVNLPSTSTSNMQLKNVAAVMVTTSLPAFAQPGQTLDVTVSSIGNAKSI 133
           VQS+ISM+QQ+GVNLP T TS +QLKNVAAV+VT+SLPAFAQPGQTLD+TVSS+GNAKS+
Sbjct: 86  VQSIISMMQQMGVNLP-TGTS-LQLKNVAAVIVTSSLPAFAQPGQTLDITVSSMGNAKSL 143

Query: 134 RGGTLLMAPLKGADGQIYAIAQGNIVVGGAGASA 167
           RGGTLLM PLKGADGQ+YA+AQG++VVGG GASA
Sbjct: 144 RGGTLLMTPLKGADGQVYAMAQGSLVVGGVGASA 177


>ref|YP_001100168.1| flagellar basal body P-ring protein [Herminiimonas arsenicoxydans]
 emb|CAL62044.1| Flagellar P-ring protein precursor (Basal body P-ring protein)
           [Herminiimonas arsenicoxydans]
          Length = 377

 Score =  224 bits (570), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 109/137 (79%), Positives = 122/137 (89%), Gaps = 2/137 (1%)

Query: 19  MLVAAACLLSAGVSHAERLKDLASIQGVRQNQLVGYGLAVGLDGSGDQTTQTPFTVQSVI 78
           ML  +ACLL    S AERLKDL S+QGVRQNQL+GYGL VGLDGSGDQTTQTPFTVQSVI
Sbjct: 17  MLACSACLLMPLASQAERLKDLTSVQGVRQNQLIGYGLVVGLDGSGDQTTQTPFTVQSVI 76

Query: 79  SMLQQLGVNLPSTSTSNMQLKNVAAVMVTTSLPAFAQPGQTLDVTVSSIGNAKSIRGGTL 138
           SM+QQ+G+NLP  +  N+QLKNVAAVMVT+SLPAFAQPGQTLD+TVSS+GNAKS+RGGTL
Sbjct: 77  SMMQQMGINLPQGT--NLQLKNVAAVMVTSSLPAFAQPGQTLDITVSSMGNAKSLRGGTL 134

Query: 139 LMAPLKGADGQIYAIAQ 155
           LM PLKGADGQIY +AQ
Sbjct: 135 LMTPLKGADGQIYGMAQ 151


>ref|YP_001353115.1| flagellar basal body P-ring protein [Janthinobacterium sp.
           Marseille]
 gb|ABR89111.1| FlgI flagellar basal-body P-ring protein [Janthinobacterium sp.
           Marseille]
          Length = 375

 Score =  223 bits (568), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 108/150 (72%), Positives = 127/150 (84%), Gaps = 2/150 (1%)

Query: 6   RSLSLFRFNRLATMLVAAACLLSAGVSHAERLKDLASIQGVRQNQLVGYGLAVGLDGSGD 65
            ++SL    +   ++  + CLL    +H+ERLKDLAS+QGVRQNQL+GYGL VGLDGSGD
Sbjct: 2   HNVSLPSLKKSLQLIACSVCLLLPFAAHSERLKDLASVQGVRQNQLIGYGLVVGLDGSGD 61

Query: 66  QTTQTPFTVQSVISMLQQLGVNLPSTSTSNMQLKNVAAVMVTTSLPAFAQPGQTLDVTVS 125
           QTTQTPFT+QS++SM+QQ+GVNLP     NMQLKNVAAVMVTTSLPAFAQPGQTLD+TVS
Sbjct: 62  QTTQTPFTIQSIVSMMQQMGVNLPQGV--NMQLKNVAAVMVTTSLPAFAQPGQTLDITVS 119

Query: 126 SIGNAKSIRGGTLLMAPLKGADGQIYAIAQ 155
           S+GNAKS+RGGTLLM PLKGADGQIY +AQ
Sbjct: 120 SMGNAKSLRGGTLLMTPLKGADGQIYGMAQ 149