BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0053.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775463.1| flagellar protein [Herbaspirillum seropedica...   237   4e-61
ref|YP_001353127.1| flagellar biosynthesis chaperone [Janthinoba...   194   3e-48
ref|YP_001100155.1| flagellar fliJ protein [Herminiimonas arseni...   189   1e-46
ref|ZP_08272772.1| Flagellar protein fliJ [Oxalobacteraceae bact...   183   8e-45
ref|YP_315362.1| flagellar protein FliJ [Thiobacillus denitrific...   148   3e-34

>ref|YP_003775463.1| flagellar protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63555.1| flagellar protein [Herbaspirillum seropedicae SmR1]
          Length = 146

 Score =  237 bits (604), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 115/146 (78%), Positives = 132/146 (90%)

Query: 1   MATTTALETLIELATKETDEATKRLGRSVRTSEEAQQKLVILEQYRDDYALRFQESLSSG 60
           MAT +AL+TLIELATKETDEATKRLGR+VR SEEAQQKL IL+QYRDDYA RFQE+LS+G
Sbjct: 1   MATPSALDTLIELATKETDEATKRLGRAVRVSEEAQQKLGILQQYRDDYAARFQETLSNG 60

Query: 61  LTAMSYRNFQLFIEKIDSAITGQQNVVKNAQQRVAEARAAWQACERKRMSYDTLATRAKQ 120
           LTA+SYRNFQLFIEKID+AI GQ++VV+++QQRVAEARAAWQACERKRMSYDTLATRA+ 
Sbjct: 61  LTALSYRNFQLFIEKIDNAIAGQEDVVRSSQQRVAEARAAWQACERKRMSYDTLATRARD 120

Query: 121 TMQLRETRRDQKQTDEQASRITFYKR 146
               ++ +RDQK  DE ASRITFYKR
Sbjct: 121 KEMQKQNKRDQKSMDEHASRITFYKR 146


>ref|YP_001353127.1| flagellar biosynthesis chaperone [Janthinobacterium sp. Marseille]
 gb|ABR88322.1| Flagellar biosynthesis chaperone [Janthinobacterium sp. Marseille]
          Length = 146

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 93/146 (63%), Positives = 120/146 (82%)

Query: 1   MATTTALETLIELATKETDEATKRLGRSVRTSEEAQQKLVILEQYRDDYALRFQESLSSG 60
           MAT+TAL+TLIELATKETDEA KRLG+ ++T+EE +QKL +LEQYRDDYA RFQ++LS+G
Sbjct: 1   MATSTALDTLIELATKETDEAAKRLGKCMKTAEECEQKLALLEQYRDDYAARFQQNLSTG 60

Query: 61  LTAMSYRNFQLFIEKIDSAITGQQNVVKNAQQRVAEARAAWQACERKRMSYDTLATRAKQ 120
           L+A+ Y+N+Q F+ K++ AI+ QQ+VV++A  RV   R+AWQA ERKRMSY TLA RA +
Sbjct: 61  LSALGYQNYQQFLGKLEQAISSQQSVVRDAHMRVERERSAWQASERKRMSYGTLANRALK 120

Query: 121 TMQLRETRRDQKQTDEQASRITFYKR 146
             QL+E +RDQKQTDE A+R   YKR
Sbjct: 121 AKQLQENKRDQKQTDEHAARALLYKR 146


>ref|YP_001100155.1| flagellar fliJ protein [Herminiimonas arsenicoxydans]
 gb|AAV68360.1| FliJ [Herminiimonas arsenicoxydans]
 emb|CAL62031.1| flagellar FliJ protein [Herminiimonas arsenicoxydans]
          Length = 146

 Score =  189 bits (480), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/146 (61%), Positives = 119/146 (81%)

Query: 1   MATTTALETLIELATKETDEATKRLGRSVRTSEEAQQKLVILEQYRDDYALRFQESLSSG 60
           MAT++AL+TLIELA+KE+DEA KRLG  ++ +E+++QKL +L QYRDDYA RFQ++L++G
Sbjct: 1   MATSSALDTLIELASKESDEAAKRLGHCMKAAEDSEQKLALLMQYRDDYATRFQQNLANG 60

Query: 61  LTAMSYRNFQLFIEKIDSAITGQQNVVKNAQQRVAEARAAWQACERKRMSYDTLATRAKQ 120
           LTAM YRNFQLF++K+++AI+ QQ VV++A   V + R+AWQA ERKRMSY TLA RA +
Sbjct: 61  LTAMGYRNFQLFLDKLENAISSQQLVVRDAHIHVEQERSAWQASERKRMSYGTLANRALK 120

Query: 121 TMQLRETRRDQKQTDEQASRITFYKR 146
             QL E +RDQKQTDE A+R   YKR
Sbjct: 121 ARQLAENKRDQKQTDEHAARQFLYKR 146


>ref|ZP_08272772.1| Flagellar protein fliJ [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF33771.1| Flagellar protein fliJ [Oxalobacteraceae bacterium IMCC9480]
          Length = 146

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 111/146 (76%)

Query: 1   MATTTALETLIELATKETDEATKRLGRSVRTSEEAQQKLVILEQYRDDYALRFQESLSSG 60
           MAT +A++TLIELA K+TDEA KRLG ++R  EE +QK+ +L QYRDDYA RFQ SLS G
Sbjct: 1   MATPSAIDTLIELAVKDTDEAAKRLGLTIRACEEVEQKMALLVQYRDDYADRFQHSLSVG 60

Query: 61  LTAMSYRNFQLFIEKIDSAITGQQNVVKNAQQRVAEARAAWQACERKRMSYDTLATRAKQ 120
           L+   YRNFQLFI+K+D AI  QQ V+ +A++R+ EAR AWQ+ ERKRMSY TLA+RA +
Sbjct: 61  LSPSGYRNFQLFIDKLDGAIASQQLVLLDAKRRIEEARTAWQSSERKRMSYGTLASRALK 120

Query: 121 TMQLRETRRDQKQTDEQASRITFYKR 146
             Q +E +RDQK  DE A+R   YKR
Sbjct: 121 VAQQKEAKRDQKAMDEHAARALLYKR 146


>ref|YP_315362.1| flagellar protein FliJ [Thiobacillus denitrificans ATCC 25259]
 gb|AAZ97557.1| flagellar protein FliJ [Thiobacillus denitrificans ATCC 25259]
          Length = 149

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/146 (54%), Positives = 104/146 (71%)

Query: 1   MATTTALETLIELATKETDEATKRLGRSVRTSEEAQQKLVILEQYRDDYALRFQESLSSG 60
           MA  +AL+TLI+LA KETDEA KRL  ++R  EEA +KL +L QYRDDY++R Q  L+ G
Sbjct: 1   MAAPSALDTLIDLAIKETDEAAKRLAAALRAGEEASEKLALLTQYRDDYSMRCQADLAGG 60

Query: 61  LTAMSYRNFQLFIEKIDSAITGQQNVVKNAQQRVAEARAAWQACERKRMSYDTLATRAKQ 120
           L+     N+Q+F++K+D AI+GQQ VV   Q ++A AR AWQACE+K+MS+ TLA RAK+
Sbjct: 61  LSTTQLHNYQVFMQKLDYAISGQQKVVDAVQAQIAAARTAWQACEQKKMSFVTLAGRAKK 120

Query: 121 TMQLRETRRDQKQTDEQASRITFYKR 146
               RE  RDQKQ DE A+R    KR
Sbjct: 121 EETRRELWRDQKQNDEHAARRALVKR 146