BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0032.p (434 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775486.1| replicative DNA helicase [Herbaspirillum ser... 797 0.0 ref|YP_001352995.1| replicative DNA helicase [Janthinobacterium ... 768 0.0 ref|YP_001100418.1| replicative DNA helicase [Herminiimonas arse... 762 0.0 ref|YP_004753132.1| replicative DNA helicase [Collimonas fungivo... 759 0.0 ref|ZP_08275954.1| Replicative DNA helicase [Oxalobacteraceae ba... 759 0.0 >ref|YP_003775486.1| replicative DNA helicase [Herbaspirillum seropedicae SmR1] gb|ADJ63578.1| replicative DNA helicase protein [Herbaspirillum seropedicae SmR1] Length = 478 Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/467 (84%), Positives = 419/467 (89%), Gaps = 33/467 (7%) Query: 1 MRAMNASPDPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIF 60 R S DPQ+++LRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIF Sbjct: 12 FRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIF 71 Query: 61 QHIVKLINESKPADVITVYEAMSTSGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDR 120 +HIVKLIN +KPADVITVYEAMSTSGKAEEVGGL YLNALAQNTPSAANIRRYAEIVRDR Sbjct: 72 EHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDR 131 Query: 121 GILRKLITVSDEISGDAFHPQGKNVKQMLDEAESKIFAIAEEGSRGSQGFLSIQPLLTQV 180 GILRKLITV+DEISG+AF+PQGK+VK MLDEAESKIFAIAEEGSRGSQGF+ IQPLLTQV Sbjct: 132 GILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQV 191 Query: 181 VERIDELYNRDSTSDITGVPTGFIDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENV 240 VERIDELYNRDS+SDITGVPTGF+DLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGE+V Sbjct: 192 VERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHV 251 Query: 241 AIDSGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLIDEDWPRLTHAIQKMNDAQ 300 AI+SGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRL+DEDWPRLTHAIQKMNDAQ Sbjct: 252 AIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQ 311 Query: 301 FYIDETPALSPIELRA---------------------------------RSRRLAXISRS 327 FYIDETPALSPIELRA R+ ++ ISRS Sbjct: 312 FYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRS 371 Query: 328 LKGLAKELNCPVIALSQLNRALEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPD 387 LKGLAKELNCPVIALSQLNR+LEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPD Sbjct: 372 LKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPD 431 Query: 388 SPDKGTAEIIIGKQRNGPIGSIRLAFLGQFTKYDNYVGSLASPYGGD 434 SPDKGTAEIIIGKQRNGPIGSIRL+FLG +TKYDNY+G+LA PYGGD Sbjct: 432 SPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 478 >ref|YP_001352995.1| replicative DNA helicase [Janthinobacterium sp. Marseille] gb|ABR88333.1| replicative DNA helicase [Janthinobacterium sp. Marseille] Length = 461 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/462 (82%), Positives = 409/462 (88%), Gaps = 32/462 (6%) Query: 4 MNASPDPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFQHI 63 MN DPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV+ +DFYRYDHRIIFQHI Sbjct: 1 MNTRADPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVNHDDFYRYDHRIIFQHI 60 Query: 64 VKLINESKPADVITVYEAMSTSGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGIL 123 VKLIN ++PADVITV+EA++ SGKAEEVGG++YLNALAQNTPSAANIRRYAEIVRDRG+L Sbjct: 61 VKLINNARPADVITVFEALTNSGKAEEVGGVAYLNALAQNTPSAANIRRYAEIVRDRGVL 120 Query: 124 RKLITVSDEISGDAFHPQGKNVKQMLDEAESKIFAIAEEGSRGSQGFLSIQPLLTQVVER 183 RKLITVSDEISG+AF+PQGK VKQMLDEAESKIFAIAEEG+RG+QGF IQPLLTQVVER Sbjct: 121 RKLITVSDEISGNAFNPQGKEVKQMLDEAESKIFAIAEEGARGAQGFQEIQPLLTQVVER 180 Query: 184 IDELYNRDSTSDITGVPTGFIDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENVAID 243 IDELYNRDSTSDITGVPTGF DLD+MTSGLQPGDLIIVAGRPSMGKTAFSINIGE VAI+ Sbjct: 181 IDELYNRDSTSDITGVPTGFADLDRMTSGLQPGDLIIVAGRPSMGKTAFSINIGETVAIE 240 Query: 244 SGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLIDEDWPRLTHAIQKMNDAQFYI 303 SGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRL DEDWPRLTHAIQKMNDAQ YI Sbjct: 241 SGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLADEDWPRLTHAIQKMNDAQLYI 300 Query: 304 DETPALSPIELRA-------------------------------RSRRLAXISRSLKGLA 332 DETPAL+ IELRA R+ ++ ISRSLKGLA Sbjct: 301 DETPALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSANSAGENRATEISEISRSLKGLA 360 Query: 333 KELNCPVIALSQLNRALEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG 392 KELNCPVIALSQLNR+LEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG Sbjct: 361 KELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG 420 Query: 393 TAEIIIGKQRNGPIGSIRLAFLGQFTKYDNYVGSLASPYGGD 434 TAEIIIGKQRNGPIG++RL FLGQ+TK++NY GS A+ Y GD Sbjct: 421 TAEIIIGKQRNGPIGAVRLTFLGQYTKFENYTGS-AALYQGD 461 >ref|YP_001100418.1| replicative DNA helicase [Herminiimonas arsenicoxydans] emb|CAL62295.1| Replicative DNA helicase [Herminiimonas arsenicoxydans] Length = 461 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/462 (82%), Positives = 406/462 (87%), Gaps = 32/462 (6%) Query: 4 MNASPDPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFQHI 63 MN DPQ++SLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV +DFYRYDHRIIFQHI Sbjct: 1 MNNRADPQVDSLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVHQDDFYRYDHRIIFQHI 60 Query: 64 VKLINESKPADVITVYEAMSTSGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGIL 123 V+LIN S+PADVITV+EA++ SGKAEEVGG+SYLNALAQNTPSAANIRRYAEIVRDRGIL Sbjct: 61 VRLINGSRPADVITVFEALTNSGKAEEVGGVSYLNALAQNTPSAANIRRYAEIVRDRGIL 120 Query: 124 RKLITVSDEISGDAFHPQGKNVKQMLDEAESKIFAIAEEGSRGSQGFLSIQPLLTQVVER 183 RKLITVSDEISG AF+PQGK VKQMLDEAESKIFAIAEEGSRG+QGF IQPLLTQVVER Sbjct: 121 RKLITVSDEISGQAFNPQGKEVKQMLDEAESKIFAIAEEGSRGAQGFQEIQPLLTQVVER 180 Query: 184 IDELYNRDSTSDITGVPTGFIDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENVAID 243 IDELYNRDSTSDITGVPTGF DLD+MTSGLQPGDLIIVAGRPSMGKTAFSINIGE VAI+ Sbjct: 181 IDELYNRDSTSDITGVPTGFADLDRMTSGLQPGDLIIVAGRPSMGKTAFSINIGETVAIE 240 Query: 244 SGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLIDEDWPRLTHAIQKMNDAQFYI 303 SGLPVAVFSMEMGG QLAMRMLGSVGRLDQHRLRTG+L DEDWPRLTHAIQKMNDAQ YI Sbjct: 241 SGLPVAVFSMEMGGTQLAMRMLGSVGRLDQHRLRTGKLADEDWPRLTHAIQKMNDAQLYI 300 Query: 304 DETPALSPIELRA-------------------------------RSRRLAXISRSLKGLA 332 DETPAL+ IELRA R+ ++ ISR+LKGLA Sbjct: 301 DETPALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSANSSGENRATEISEISRNLKGLA 360 Query: 333 KELNCPVIALSQLNRALEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG 392 KELNCPVIALSQLNR+LEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG Sbjct: 361 KELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG 420 Query: 393 TAEIIIGKQRNGPIGSIRLAFLGQFTKYDNYVGSLASPYGGD 434 TAEIIIGKQRNGPIGS+RL FLGQ+TK++NY GS A+ Y GD Sbjct: 421 TAEIIIGKQRNGPIGSVRLTFLGQYTKFENYTGS-AALYQGD 461 >ref|YP_004753132.1| replicative DNA helicase [Collimonas fungivorans Ter331] gb|AEK62309.1| Replicative DNA helicase [Collimonas fungivorans Ter331] Length = 466 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/466 (80%), Positives = 411/466 (88%), Gaps = 32/466 (6%) Query: 1 MRAMNASP-DPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRII 59 M+A + +P DPQL+SLRVPPHSIEAEQSVLGGLLLDNAAWD+IADFVSA+DFYRYDHRII Sbjct: 1 MKAPSKAPSDPQLDSLRVPPHSIEAEQSVLGGLLLDNAAWDKIADFVSADDFYRYDHRII 60 Query: 60 FQHIVKLINESKPADVITVYEAMSTSGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRD 119 FQH+VKLIN SKPADVITV+E++S +GKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRD Sbjct: 61 FQHMVKLINGSKPADVITVFESLSGTGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRD 120 Query: 120 RGILRKLITVSDEISGDAFHPQGKNVKQMLDEAESKIFAIAEEGSRGSQGFLSIQPLLTQ 179 RG+LRKLITV+DEISG AF PQGK VKQMLDEAESKIFAIAEEG+RG+QGF IQPLLTQ Sbjct: 121 RGVLRKLITVADEISGQAFSPQGKEVKQMLDEAESKIFAIAEEGARGAQGFQEIQPLLTQ 180 Query: 180 VVERIDELYNRDSTSDITGVPTGFIDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEN 239 VVERIDELYNRD+ SDITGV TGFIDLDKMTSGLQ GDL+IVAGRPSMGKTAFS+NIGEN Sbjct: 181 VVERIDELYNRDNQSDITGVSTGFIDLDKMTSGLQKGDLVIVAGRPSMGKTAFSVNIGEN 240 Query: 240 VAIDSGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLIDEDWPRLTHAIQKMNDA 299 VAI+SGLPVA+FSMEMGG QLAMRMLGSVG+LDQHRLRTGRL DEDWPRLTHAIQKMNDA Sbjct: 241 VAIESGLPVAIFSMEMGGTQLAMRMLGSVGKLDQHRLRTGRLNDEDWPRLTHAIQKMNDA 300 Query: 300 QFYIDETPALSPIELRA-------------------------------RSRRLAXISRSL 328 Q +IDETPALS IELRA R+ ++ ISR+L Sbjct: 301 QLFIDETPALSSIELRARARRLSRQCGTLGLIIIDYLQLMSANNAGENRATEISEISRNL 360 Query: 329 KGLAKELNCPVIALSQLNRALEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDS 388 KGLAKEL CPVIALSQLNR+LEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDS Sbjct: 361 KGLAKELQCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDS 420 Query: 389 PDKGTAEIIIGKQRNGPIGSIRLAFLGQFTKYDNYVGSLASPYGGD 434 +KGTAEIIIGKQRNGPIGS+RL+F+GQ+TK+DNY G+L +PYGGD Sbjct: 421 QEKGTAEIIIGKQRNGPIGSVRLSFIGQYTKFDNYAGNLDAPYGGD 466 >ref|ZP_08275954.1| Replicative DNA helicase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30578.1| Replicative DNA helicase [Oxalobacteraceae bacterium IMCC9480] Length = 483 Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/461 (82%), Positives = 406/461 (88%), Gaps = 32/461 (6%) Query: 5 NASPDPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFQHIV 64 ++ PD QL++LRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV +DFYRYDHR+IFQHIV Sbjct: 24 DSRPDIQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVHQDDFYRYDHRLIFQHIV 83 Query: 65 KLINESKPADVITVYEAMSTSGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGILR 124 KLIN SKPADVITV+E+++++GKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRG+LR Sbjct: 84 KLINGSKPADVITVFESLTSTGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGVLR 143 Query: 125 KLITVSDEISGDAFHPQGKNVKQMLDEAESKIFAIAEEGSRGSQGFLSIQPLLTQVVERI 184 KLITV+DEISG AF+PQGK VKQMLDEAESKIFAIAEEGSRG+QGF IQPLLTQVVERI Sbjct: 144 KLITVADEISGQAFNPQGKEVKQMLDEAESKIFAIAEEGSRGAQGFQEIQPLLTQVVERI 203 Query: 185 DELYNRDSTSDITGVPTGFIDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENVAIDS 244 DELYNRD+ SDITGVPTGF DLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENVAID+ Sbjct: 204 DELYNRDNQSDITGVPTGFADLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENVAIDT 263 Query: 245 GLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLIDEDWPRLTHAIQKMNDAQFYID 304 GLPVAVFSMEMGG QLAMRMLGSVGRLDQHRLRTG+L DEDWPRLTHAIQKMNDAQ YID Sbjct: 264 GLPVAVFSMEMGGTQLAMRMLGSVGRLDQHRLRTGKLADEDWPRLTHAIQKMNDAQLYID 323 Query: 305 ETPALSPIELRA-------------------------------RSRRLAXISRSLKGLAK 333 ETPAL+ IELRA R+ ++ ISRSLKGLAK Sbjct: 324 ETPALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSGNSAGENRATEISEISRSLKGLAK 383 Query: 334 ELNCPVIALSQLNRALEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGT 393 ELNCPVIALSQLNR+LEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGT Sbjct: 384 ELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGT 443 Query: 394 AEIIIGKQRNGPIGSIRLAFLGQFTKYDNYVGSLASPYGGD 434 AEIIIGKQRNGPIGSIRL F GQ+TK+DNY G+ A YGGD Sbjct: 444 AEIIIGKQRNGPIGSIRLTFQGQYTKFDNYTGN-APLYGGD 483