BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0027.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775492.1| xylanase/chitin deacetylase [Herbaspirillum ... 534 e-150 ref|YP_004753116.1| polymyxin resistance protein PmrJ deacetylas... 498 e-139 ref|ZP_08275949.1| Polymyxin resistance protein [Oxalobacteracea... 482 e-134 ref|ZP_00946865.1| Chitooligosaccharide deacetylase [Ralstonia s... 399 e-109 ref|YP_003745910.1| polysaccharide deacetylase; protein [Ralston... 399 e-109 >ref|YP_003775492.1| xylanase/chitin deacetylase [Herbaspirillum seropedicae SmR1] gb|ADJ63584.1| xylanase/chitin deacetylase protein [Herbaspirillum seropedicae SmR1] Length = 313 Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust. Identities = 252/312 (80%), Positives = 278/312 (89%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQVFRPGFFSK 75 +P++TLKIDADTYRGTR GVPNL+ QL RH A ATFLFSLGPDHTGWALKQ+FRPGFFSK Sbjct: 1 MPKLTLKIDADTYRGTRVGVPNLISQLRRHGAGATFLFSLGPDHTGWALKQIFRPGFFSK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCAKYMGAVRDAGFECGIHTWDHRVWQDHVRT 135 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCA +M AGFECGIHTWDHRVWQD+VRT Sbjct: 61 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCADFMRQAHAAGFECGIHTWDHRVWQDNVRT 120 Query: 136 RDAAWTRETMQRSYARFHDIFGHAPVTHGAAGWQMNDHAFAQLDEFGIAYSSDGRAVLNE 195 DA WT ETMQ++Y R+HDIFGHAP THGAAGWQMNDHAF QLD+FGIAYSSDGR+ L E Sbjct: 121 ADAQWTTETMQQAYGRYHDIFGHAPRTHGAAGWQMNDHAFVQLDQFGIAYSSDGRSQLRE 180 Query: 196 DGSLQDFAAGPHRLAAGGKTLSCVQLPTTLPTLDELLGRTIHGVVMDASNVAAMLLRLTE 255 DGSL D AGPHRL+ GK LSCVQLPTTLPTLDE+LGRTI G ++DA N A +LL LT+ Sbjct: 181 DGSLADQDAGPHRLSVFGKPLSCVQLPTTLPTLDEILGRTIRGKLIDAGNAAELLLELTK 240 Query: 256 QRRDHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGEYYQTVKDDVLPILPIAWGE 315 RDHVFTLHAELEGQKLAPIFE+LL GWRAQGY+LVSMG+YYQ++++DVLPILPI+WGE Sbjct: 241 TPRDHVFTLHAELEGQKLAPIFERLLAGWRAQGYELVSMGDYYQSIQNDVLPILPISWGE 300 Query: 316 LPGRSGDMILQA 327 LPGRSGDMILQA Sbjct: 301 LPGRSGDMILQA 312 >ref|YP_004753116.1| polymyxin resistance protein PmrJ deacetylase [Collimonas fungivorans Ter331] gb|AEK62293.1| Polymyxin resistance protein PmrJ, putative deacetylase [Collimonas fungivorans Ter331] Length = 315 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 235/313 (75%), Positives = 267/313 (85%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQVFRPGFFSK 75 +P +TLKIDADTYRGTREGVPNLV+ L ++ A ATFLFSLG DHTGWALKQVFRPGFF K Sbjct: 1 MPLLTLKIDADTYRGTREGVPNLVRLLSKYQARATFLFSLGHDHTGWALKQVFRPGFFQK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCAKYMGAVRDAGFECGIHTWDHRVWQDHVRT 135 VSRTSVVEHYG+KTLMYG LLPAPDIGKTCA YM AVRDAGFECG+HTWDHRVWQDHVR Sbjct: 61 VSRTSVVEHYGLKTLMYGVLLPAPDIGKTCANYMQAVRDAGFECGVHTWDHRVWQDHVRQ 120 Query: 136 RDAAWTRETMQRSYARFHDIFGHAPVTHGAAGWQMNDHAFAQLDEFGIAYSSDGRAVLNE 195 R A WT + MQRS+ RF IFG AP THGAAGWQMN +AF QL++FGIAY+SDGRA+L + Sbjct: 121 RGADWTSQQMQRSFDRFTQIFGQAPNTHGAAGWQMNPYAFEQLEKFGIAYASDGRAMLAD 180 Query: 196 DGSLQDFAAGPHRLAAGGKTLSCVQLPTTLPTLDELLGRTIHGVVMDASNVAAMLLRLTE 255 DG+L D AAGPHRL GKTL+C+QLPTTLPTLDELLGR+ GV + +N+AA +L LT Sbjct: 181 DGALADQAAGPHRLQVNGKTLACIQLPTTLPTLDELLGRSFGGVELTPANIAAHILALTA 240 Query: 256 QRRDHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGEYYQTVKDDVLPILPIAWGE 315 RDHVFTLHAELEGQKLAPIFEQLL W+AQGYDLV+M +YY+ VKD LP +P+AW E Sbjct: 241 TPRDHVFTLHAELEGQKLAPIFEQLLQAWKAQGYDLVAMEDYYRQVKDQQLPTVPLAWAE 300 Query: 316 LPGRSGDMILQAA 328 LPGRSG+MI+QA+ Sbjct: 301 LPGRSGEMIMQAS 313 >ref|ZP_08275949.1| Polymyxin resistance protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30573.1| Polymyxin resistance protein [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 228/313 (72%), Positives = 263/313 (84%) Query: 16 LPQITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQVFRPGFFSK 75 +P ITLKID DT+RGTREGVPNLV+ L +HDA+ATFLFSLGPDHTGWAL++ FRPGFF K Sbjct: 1 MPLITLKIDVDTFRGTREGVPNLVRMLQKHDAHATFLFSLGPDHTGWALRRAFRPGFFQK 60 Query: 76 VSRTSVVEHYGIKTLMYGTLLPAPDIGKTCAKYMGAVRDAGFECGIHTWDHRVWQDHVRT 135 VSRTSV+EHYG+KTLMYG LLPAPDIG+ CA + AV AGFECGIHTWDH VWQDHVR Sbjct: 61 VSRTSVLEHYGLKTLMYGVLLPAPDIGQLCATQLRAVHQAGFECGIHTWDHVVWQDHVRQ 120 Query: 136 RDAAWTRETMQRSYARFHDIFGHAPVTHGAAGWQMNDHAFAQLDEFGIAYSSDGRAVLNE 195 +DAAWT++ MQRS+ RF IFGHAP THGAAGWQMN HAF QLD FGIAY+SD RA LN+ Sbjct: 121 QDAAWTQDLMQRSHERFVAIFGHAPQTHGAAGWQMNPHAFRQLDAFGIAYASDERAQLND 180 Query: 196 DGSLQDFAAGPHRLAAGGKTLSCVQLPTTLPTLDELLGRTIHGVVMDASNVAAMLLRLTE 255 DGSL AGPHRL+ G+TLSC+Q+PTTLPTLDELLGRTI G ++ +N+AA+LLRLT Sbjct: 181 DGSLLHADAGPHRLSVDGQTLSCIQMPTTLPTLDELLGRTIDGELVTTANIAALLLRLTA 240 Query: 256 QRRDHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGEYYQTVKDDVLPILPIAWGE 315 RDHV+TLHAELEGQKLAPIF++LL GWRAQGY L SM +Y+Q + LP+ PI WG Sbjct: 241 SPRDHVYTLHAELEGQKLAPIFDELLSGWRAQGYTLASMADYHQAIGQRALPVNPIDWGT 300 Query: 316 LPGRSGDMILQAA 328 LPGRSGD++LQAA Sbjct: 301 LPGRSGDLLLQAA 313 >ref|ZP_00946865.1| Chitooligosaccharide deacetylase [Ralstonia solanacearum UW551] ref|YP_002259725.1| polysaccharide deacetylase; protein [Ralstonia solanacearum IPO1609] gb|EAP70641.1| Chitooligosaccharide deacetylase [Ralstonia solanacearum UW551] emb|CAQ61657.1| polysaccharide deacetylase; protein [Ralstonia solanacearum IPO1609] Length = 297 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/310 (63%), Positives = 232/310 (74%), Gaps = 16/310 (5%) Query: 19 ITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQVFRPGFFSKVSR 78 I LKID DT RGTREGVPNLV+ L H+A ATFLFSLGPDHTGWAL++ FRPGF KVSR Sbjct: 4 IVLKIDVDTLRGTREGVPNLVRMLRAHEAGATFLFSLGPDHTGWALRRAFRPGFLKKVSR 63 Query: 79 TSVVEHYGIKTLMYGTLLPAPDIGKTCAKYMGAVRDAGFECGIHTWDHRVWQDHVRTRDA 138 TSVVEHYG++TLMYG LLP PDIG+ A M AV +AGFE GIHTWDH WQD+VR RDA Sbjct: 64 TSVVEHYGLRTLMYGVLLPGPDIGRKAAAEMRAVAEAGFETGIHTWDHVRWQDNVRQRDA 123 Query: 139 AWTRETMQRSYARFHDIFGHAPVTHGAAGWQMNDHAFAQLDEFGIAYSSDGRAVLNEDGS 198 AWT M ++ RF +IFGHAPVTHGAAGWQMNDHAF Q+D +G+AY+SDGR + Sbjct: 124 AWTARQMGAAHKRFAEIFGHAPVTHGAAGWQMNDHAFRQIDAWGMAYASDGRGM------ 177 Query: 199 LQDFAAGPHRLAAGGKTLSCVQLPTTLPTLDELLGRTIHGVVMDASNVAAMLLRLTEQRR 258 P+ + G+ L VQLPTTLPTLDEL+G + A NVA +L+ TE R Sbjct: 178 ------HPYIPSVDGQPLGHVQLPTTLPTLDELIGVND----LTADNVARHILKTTESDR 227 Query: 259 DHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGEYYQTVKDDVLPILPIAWGELPG 318 D VFTLHAELEGQKLAPIFE+LL GWRAQG+ LVSMG+Y+ T+ LP+ P+ WGE+PG Sbjct: 228 DQVFTLHAELEGQKLAPIFEELLRGWRAQGHRLVSMGDYHATLDRSTLPVQPVTWGEIPG 287 Query: 319 RSGDMILQAA 328 RSG +I+Q A Sbjct: 288 RSGSLIVQPA 297 >ref|YP_003745910.1| polysaccharide deacetylase; protein [Ralstonia solanacearum CFBP2957] emb|CBJ43301.1| polysaccharide deacetylase; protein [Ralstonia solanacearum CFBP2957] Length = 297 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 198/310 (63%), Positives = 233/310 (75%), Gaps = 16/310 (5%) Query: 19 ITLKIDADTYRGTREGVPNLVQQLLRHDANATFLFSLGPDHTGWALKQVFRPGFFSKVSR 78 I LKID DT RGTREGVPNLV+ L H+A ATFLFSLGPDHTGWAL++ FRPGF KVSR Sbjct: 4 IVLKIDVDTLRGTREGVPNLVRMLRAHEAGATFLFSLGPDHTGWALRRAFRPGFLKKVSR 63 Query: 79 TSVVEHYGIKTLMYGTLLPAPDIGKTCAKYMGAVRDAGFECGIHTWDHRVWQDHVRTRDA 138 TSVVEHYG++TLMYG LLP PDIG+ A M AV +AGFE GIHTWDH WQD+VR RDA Sbjct: 64 TSVVEHYGLRTLMYGVLLPGPDIGRKAAAEMRAVAEAGFETGIHTWDHVRWQDNVRQRDA 123 Query: 139 AWTRETMQRSYARFHDIFGHAPVTHGAAGWQMNDHAFAQLDEFGIAYSSDGRAVLNEDGS 198 AWT M ++ARF +IFGHAPVTHGAAGWQMNDHAF Q+D +G+AY+SDGR Sbjct: 124 AWTARQMGAAHARFAEIFGHAPVTHGAAGWQMNDHAFRQIDAWGMAYASDGRGT------ 177 Query: 199 LQDFAAGPHRLAAGGKTLSCVQLPTTLPTLDELLGRTIHGVVMDASNVAAMLLRLTEQRR 258 P+ + G+ L VQLPTTLPTLDEL+G ++ + D NVA +L+ TE R Sbjct: 178 ------HPYIPSVDGQPLRHVQLPTTLPTLDELIG--VNDLTSD--NVARHILKTTESDR 227 Query: 259 DHVFTLHAELEGQKLAPIFEQLLLGWRAQGYDLVSMGEYYQTVKDDVLPILPIAWGELPG 318 D VFTLHAELEGQKLAPIFE+LL GWRAQG+ L SMG+Y+ T+ LP+ P+ WGE+PG Sbjct: 228 DQVFTLHAELEGQKLAPIFEELLRGWRAQGHRLASMGDYHATLDRSTLPVQPVTWGEIPG 287 Query: 319 RSGDMILQAA 328 RSG +I+Q A Sbjct: 288 RSGSLIVQPA 297