BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0023.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775496.1| pyridoxal phosphate-dependent aminotransfera...   189   9e-47
ref|YP_263018.1| DegT/DnrJ/EryC1/StrS family aminotransferase [P...   179   2e-43
ref|ZP_08275660.1| UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate ...   177   3e-43
ref|YP_004753112.1| UDP-4-amino-4-deoxy-L-arabinose--oxoglutarat...   174   4e-42
ref|ZP_07778217.1| aminotransferase, DegT/DnrJ/EryC1/StrS family...   173   7e-42

>ref|YP_003775496.1| pyridoxal phosphate-dependent aminotransferase [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ63588.1| pyridoxal phosphate-dependent aminotransferase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 373

 Score =  189 bits (481), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 88/110 (80%), Positives = 97/110 (88%)

Query: 1   VFGPDFEAQSGVQLPVADFENSNWHMYQLVLPERITRAAFMEKMMERQIGIGYHYPPIHL 60
            FG DFE++ G QLPVADFENSNWHM+QLVLPERITRAAFMEKMME+QIGIGYHYP IHL
Sbjct: 264 CFGSDFESRYGAQLPVADFENSNWHMFQLVLPERITRAAFMEKMMEKQIGIGYHYPAIHL 323

Query: 61  LKLYRDRGFREGMFPIAERVGRLIVSLPMFTAMSKEDVERAVGAVKSVLA 110
           LKLYR+RGF EGMFP+AERVG+ IVSLPMF  MSK+DV R+V  VKSVL 
Sbjct: 324 LKLYRERGFGEGMFPVAERVGQRIVSLPMFNTMSKDDVVRSVETVKSVLG 373


>ref|YP_263018.1| DegT/DnrJ/EryC1/StrS family aminotransferase [Pseudomonas
           fluorescens Pf-5]
 gb|AAY95150.1| aminotransferase, DegT/DnrJ/EryC1/StrS family [Pseudomonas
           fluorescens Pf-5]
          Length = 379

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/113 (76%), Positives = 93/113 (82%), Gaps = 4/113 (3%)

Query: 1   VFGPDFEAQSGVQLPVADFENSNWHMYQLVLPERI----TRAAFMEKMMERQIGIGYHYP 56
            FG DFEA+ G QLP ADF NSNWH++QLVLPER      RA FME+M E  IGIGYHYP
Sbjct: 265 CFGSDFEARYGAQLPPADFTNSNWHLFQLVLPERKDGKPARATFMEQMQECGIGIGYHYP 324

Query: 57  PIHLLKLYRDRGFREGMFPIAERVGRLIVSLPMFTAMSKEDVERAVGAVKSVL 109
           PIHLL LYR+RGF+EGMFP+AERVGRLIVSLPMFTAMSK DVERAV AVK VL
Sbjct: 325 PIHLLSLYRERGFKEGMFPVAERVGRLIVSLPMFTAMSKADVERAVAAVKEVL 377


>ref|ZP_08275660.1| UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30865.1| UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 373

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 82/109 (75%), Positives = 93/109 (85%)

Query: 1   VFGPDFEAQSGVQLPVADFENSNWHMYQLVLPERITRAAFMEKMMERQIGIGYHYPPIHL 60
           +FG DFEA++G QLPVADFE SNWHM+QLVLPERITRA FME+MM  +IGIGYHYP IHL
Sbjct: 264 LFGSDFEARTGAQLPVADFEQSNWHMFQLVLPERITRADFMERMMALKIGIGYHYPAIHL 323

Query: 61  LKLYRDRGFREGMFPIAERVGRLIVSLPMFTAMSKEDVERAVGAVKSVL 109
           L LYR RGF +GMFP+AERVG+ IVSLPMF  M++ DVERAV AV SVL
Sbjct: 324 LSLYRARGFTDGMFPVAERVGQRIVSLPMFATMTESDVERAVAAVLSVL 372


>ref|YP_004753112.1| UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
           [Collimonas fungivorans Ter331]
 gb|AEK62289.1| UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
           [Collimonas fungivorans Ter331]
          Length = 378

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 83/113 (73%), Positives = 91/113 (80%), Gaps = 4/113 (3%)

Query: 1   VFGPDFEAQSGVQLPVADFENSNWHMYQLVLPERI----TRAAFMEKMMERQIGIGYHYP 56
            FG DFEA+ G QLPV DF NSNWHM+QLVLPER      R AFME+M ER IGIGYHYP
Sbjct: 265 CFGSDFEAKHGAQLPVPDFANSNWHMFQLVLPERQDGKPARPAFMEQMQERGIGIGYHYP 324

Query: 57  PIHLLKLYRDRGFREGMFPIAERVGRLIVSLPMFTAMSKEDVERAVGAVKSVL 109
            IHLL +YR RGF+EGMFP+AE+VGRLIVSLPMF  M+K DVERAV AVKSVL
Sbjct: 325 AIHLLSMYRARGFKEGMFPVAEKVGRLIVSLPMFNVMTKNDVERAVSAVKSVL 377


>ref|ZP_07778217.1| aminotransferase, DegT/DnrJ/EryC1/StrS family [Pseudomonas
           fluorescens WH6]
 gb|EFQ60391.1| aminotransferase, DegT/DnrJ/EryC1/StrS family [Pseudomonas
           fluorescens WH6]
          Length = 380

 Score =  173 bits (439), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 93/113 (82%), Gaps = 4/113 (3%)

Query: 1   VFGPDFEAQSGVQLPVADFENSNWHMYQLVLPERI----TRAAFMEKMMERQIGIGYHYP 56
            FG DFEAQ G QLP ADFENSNWH++QLVLPER      RA FME+M    +GIGYHYP
Sbjct: 265 CFGSDFEAQYGAQLPPADFENSNWHLFQLVLPERQDGLPARATFMEQMQAHGVGIGYHYP 324

Query: 57  PIHLLKLYRDRGFREGMFPIAERVGRLIVSLPMFTAMSKEDVERAVGAVKSVL 109
           PIHLL LYR +GF+EGMFP+AE+VGRLIVSLPMFTAM++ DVER+V AVK+VL
Sbjct: 325 PIHLLSLYRAQGFKEGMFPVAEKVGRLIVSLPMFTAMTEADVERSVAAVKAVL 377