BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0012.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_316273.1| hypothetical protein Tbd_2515 [Thiobacillus den...   105   2e-21
ref|ZP_08783125.1| protein of unknown function DUF1425 [Methylob...    87   7e-16
ref|ZP_04590070.1| hypothetical protein POR16_22486 [Pseudomonas...    84   7e-15
ref|YP_610744.1| hypothetical protein PSEEN5344 [Pseudomonas ent...    75   2e-12
ref|YP_004356983.1| hypothetical protein PSEBR_a5464 [Pseudomona...    74   6e-12

>ref|YP_316273.1| hypothetical protein Tbd_2515 [Thiobacillus denitrificans ATCC
           25259]
 gb|AAZ98468.1| hypothetical protein Tbd_2515 [Thiobacillus denitrificans ATCC
           25259]
          Length = 136

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 80/136 (58%), Gaps = 5/136 (3%)

Query: 1   MNIKHALRAGALASALAL---GMQTLPAQAQSIASKIELLGAPASLEFTGLRMREQNGLL 57
           M ++  L  GALA AL+L    +   PA A +IASKIE  G    L+  GLR   +N LL
Sbjct: 1   MTLRKPL-GGALA-ALSLWSAAVSVTPAAADTIASKIEAQGEMTYLKVAGLRQAVRNELL 58

Query: 58  NVQAELTNRDNRQHTAYYRVKWMDETGFQVWDDEPWKPLLVNGEQKLTLQMVAPTTKARD 117
            +QAE+ N +  Q T YYR +W+D  GF VWDDE WKPLL +G+ +  +Q VAPT +A D
Sbjct: 59  TIQAEVANDNEGQQTLYYRFRWLDADGFSVWDDEAWKPLLFHGKGRQVIQAVAPTPRATD 118

Query: 118 FAIQFSATINKSLSTS 133
           F +   +  N +   S
Sbjct: 119 FRLVVQSPENSTAPAS 134


>ref|ZP_08783125.1| protein of unknown function DUF1425 [Methylobacter tundripaludum
           SV96]
 gb|EGW19770.1| protein of unknown function DUF1425 [Methylobacter tundripaludum
           SV96]
          Length = 133

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 11  ALASALALGMQTLPAQAQSIASKIELLGAPASLEFTGLRMREQNGLLNVQAELTNRDNRQ 70
           AL+   A      P +  SI +K+E L   + L+ T LR  ++N LL VQAE+ N D+  
Sbjct: 12  ALSLVSACASHKPPPRPGSINAKVEQLSEMSYLQVTDLRAVKRNHLLTVQAEINNTDSDN 71

Query: 71  HTAYYRVKWMDETGFQVWDDEPWKPLLVNGEQKLTLQMVAPTTKARDFAIQFSATINKSL 130
              YYR KW+D  GF V  +E WKP+LV   QK TL  VAP+ +  DF +   +  N   
Sbjct: 72  QQLYYRFKWLDAAGFAVGGEEAWKPVLVYAYQKQTLSAVAPSPQVTDFRLVVQSPDN--- 128

Query: 131 STSDAP 136
            T D P
Sbjct: 129 -TGDLP 133


>ref|ZP_04590070.1| hypothetical protein POR16_22486 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gb|EGI04525.1| hypothetical protein POR16_22486 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 122

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 63/114 (55%)

Query: 10  GALASALALGMQTLPAQAQSIASKIELLGAPASLEFTGLRMREQNGLLNVQAELTNRDNR 69
           G LA AL  G  T P    S ASK+ ++G   ++E   +R+  +NG L V+A+LTN  +R
Sbjct: 7   GVLALALLAGCATPPPAPGSAASKVVVMGNMKNIEVGAMRVARENGFLTVKAQLTNISSR 66

Query: 70  QHTAYYRVKWMDETGFQVWDDEPWKPLLVNGEQKLTLQMVAPTTKARDFAIQFS 123
               YYR  W+   GF V D+E WK + + G Q   L  +AP  +A DF I+ +
Sbjct: 67  NKMMYYRFAWLGNDGFPVADEESWKSMTLYGSQSAVLPAIAPVPRATDFRIEIN 120


>ref|YP_610744.1| hypothetical protein PSEEN5344 [Pseudomonas entomophila L48]
 emb|CAK17961.1| conserved hypothetical protein; putative signal peptide
           [Pseudomonas entomophila L48]
          Length = 122

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 53/103 (51%)

Query: 19  GMQTLPAQAQSIASKIELLGAPASLEFTGLRMREQNGLLNVQAELTNRDNRQHTAYYRVK 78
           G  T P    S ASK+  +G   ++E   +R+  +NG L V   L N      T YYR  
Sbjct: 16  GCATPPPAPGSAASKVVTMGQLDNIEVGQMRVARENGFLTVNVALNNTGRSNQTLYYRFA 75

Query: 79  WMDETGFQVWDDEPWKPLLVNGEQKLTLQMVAPTTKARDFAIQ 121
           W+   GF V D+E WK L + G+Q   L  +APT KA DF ++
Sbjct: 76  WLGNDGFPVADEESWKTLPLYGKQAKYLPAIAPTPKATDFRLE 118


>ref|YP_004356983.1| hypothetical protein PSEBR_a5464 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gb|AEA71979.1| conserved hypothetical protein; putative lipoprotein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 123

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 1/117 (0%)

Query: 7   LRAGALASALALGMQTLPAQAQSIASKIELLGAPASLEFTGLRMREQNGLLNVQAELTNR 66
           +  GALA  LA      P +  S ASK+  +G   ++    +R+  +NG + V  +L+N 
Sbjct: 6   IAVGALA-LLAGCATPPPPEPGSAASKVVAMGKTKNIVVGAMRVARENGYMTVNVQLSNT 64

Query: 67  DNRQHTAYYRVKWMDETGFQVWDDEPWKPLLVNGEQKLTLQMVAPTTKARDFAIQFS 123
                T YYR  W+   GF + ++E WK L + GEQ   L  +APT KA DF ++ +
Sbjct: 65  SYNNKTMYYRFAWLGPEGFPIAEEETWKSLTLYGEQTSFLPAIAPTPKAVDFRLEIN 121