BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0026.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001355155.1| ABC-type nitrate/sulfonate/bicarbonate trans... 543 e-152 ref|YP_003777962.1| nitrate/sulfonate/bicarbonate ABC transporte... 497 e-138 ref|YP_004702451.1| aliphatic sulfonate ABC transporter periplas... 345 5e-93 gb|ADR59901.1| Aliphatic sulfonate ABC transporter periplasmic l... 343 3e-92 ref|NP_745665.1| aliphatic sulfonate ABC transporter periplasmic... 342 4e-92 >ref|YP_001355155.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR90102.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] Length = 321 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 262/291 (90%), Positives = 275/291 (94%) Query: 12 EERTLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNADAIDFGHA 71 EERTLRIGYQKFNTLNILKGTGNLEKAL PLGWKVKWFEFAAGPQLTEALN DAIDFGHA Sbjct: 31 EERTLRIGYQKFNTLNILKGTGNLEKALQPLGWKVKWFEFAAGPQLTEALNLDAIDFGHA 90 Query: 72 ADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGRGWNVQYL 131 ADTPS FANA+GVNAVYLAAEQPYPKGI IFVAQDSPIRSIKELKGKK+ALGRGWNVQYL Sbjct: 91 ADTPSAFANAAGVNAVYLAAEQPYPKGIAIFVAQDSPIRSIKELKGKKIALGRGWNVQYL 150 Query: 132 LVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTRPRILRDG 191 LVRALEE GL+YNDIVP Y++NAADVRA FQSGNVDAA LWDPFLAGQ+I++ PRILRDG Sbjct: 151 LVRALEEVGLTYNDIVPAYVTNAADVRAAFQSGNVDAAALWDPFLAGQQITSNPRILRDG 210 Query: 192 TGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQLGVDPKVL 251 +GLSNNRTFHLA PKF DQNKNIIR+LFAELKKTN WTQAHPQETA+LLAPQLGVD KVL Sbjct: 211 SGLSNNRTFHLANPKFVDQNKNIIRILFAELKKTNTWTQAHPQETAELLAPQLGVDVKVL 270 Query: 252 RLATERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVYGEALL 302 RLATERR+YTTVPI+AGIIQEQQQIVEAFYKL LIKN VQVKDKVYGE LL Sbjct: 271 RLATERRNYTTVPIDAGIIQEQQQIVEAFYKLNLIKNPVQVKDKVYGEVLL 321 >ref|YP_003777962.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ66054.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 323 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 236/293 (80%), Positives = 266/293 (90%) Query: 10 AAEERTLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNADAIDFG 69 AA ++ LRIGYQKFNTLNILKG+G LE+AL P GW VKWFEFAAGPQLTEALNA+AID G Sbjct: 31 AAADKVLRIGYQKFNTLNILKGSGKLEQALQPQGWSVKWFEFAAGPQLTEALNANAIDLG 90 Query: 70 HAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGRGWNVQ 129 HAADTPSVFANASGVNAVYL AEQPYPKGIGIFVAQ+SPIRS+ +LKGKKVA GRGWNVQ Sbjct: 91 HAADTPSVFANASGVNAVYLGAEQPYPKGIGIFVAQESPIRSVADLKGKKVATGRGWNVQ 150 Query: 130 YLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTRPRILR 189 +LL++ALEE GLSY DI PVY++NAADVRA FQSGNVDAA LWDPFLAGQE++TRPRILR Sbjct: 151 FLLLKALEEVGLSYRDIEPVYVTNAADVRAAFQSGNVDAATLWDPFLAGQELATRPRILR 210 Query: 190 DGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQLGVDPK 249 DGTGLSNNRTFHLA P F D++K+I+R +FAELKKTN WTQ+HPQETA+LLAPQLGVDPK Sbjct: 211 DGTGLSNNRTFHLAVPSFVDRHKDIVRTVFAELKKTNQWTQSHPQETAELLAPQLGVDPK 270 Query: 250 VLRLATERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVYGEALL 302 VLRLATERR+YTTV ++AGI+ EQQQI +AF KLGLIKN V+V+DKVY E L+ Sbjct: 271 VLRLATERRNYTTVAVDAGIVAEQQQIADAFLKLGLIKNPVRVQDKVYPEVLV 323 >ref|YP_004702451.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Pseudomonas putida S16] gb|AEJ13571.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Pseudomonas putida S16] Length = 328 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 176/298 (59%), Positives = 218/298 (73%), Gaps = 2/298 (0%) Query: 7 WSNAA--EERTLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNAD 64 WS A E RTLRIGYQKFN++NILKG+G LEKALAP G KV W EFAAGPQL EAL+ Sbjct: 30 WSQALADEARTLRIGYQKFNSINILKGSGALEKALAPQGVKVSWHEFAAGPQLLEALSTG 89 Query: 65 AIDFGHAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGR 124 AID GHAAD PSVFA A+G VYLAAEQPYP+GIG+ V + + S+++LKGK+VA GR Sbjct: 90 AIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQDHLASVQDLKGKRVATGR 149 Query: 125 GWNVQYLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTR 184 GWN QYLL ALE+AGLSY DI P Y++NAAD A QSG+V A LWDPFLA E Sbjct: 150 GWNAQYLLAVALEQAGLSYQDITPAYVNNAADAVAALQSGSVQAVTLWDPFLAAAESQPG 209 Query: 185 PRILRDGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQL 244 + LRDG+GLSNNRTF+L+T FAD+++ +++ FAEL K + W A P+E A LLAPQL Sbjct: 210 LKNLRDGSGLSNNRTFYLSTASFADKHRALLKTFFAELGKVSQWANAKPEEVAALLAPQL 269 Query: 245 GVDPKVLRLATERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVYGEALL 302 G++ VL+ A+ERR+Y V I I+ EQQ++ + F LGLI ++QV D VY ++L Sbjct: 270 GINANVLQAASERRNYNAVAITPEIVAEQQKLADTFQGLGLIPRKLQVADAVYPASVL 327 >gb|ADR59901.1| Aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Pseudomonas putida BIRD-1] Length = 326 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 218/298 (73%), Gaps = 2/298 (0%) Query: 7 WSNAAEE--RTLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNAD 64 WS A + RTLRIGYQKFN++NILKG+G LEKALAP G KV W EFAAGPQL EAL+ Sbjct: 28 WSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVKVSWHEFAAGPQLLEALSTG 87 Query: 65 AIDFGHAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGR 124 AID GHAAD PSVFA A+G VYLAAEQPYP+GIG+ V + + S+++LKGK+VA GR Sbjct: 88 AIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQDYLASVQDLKGKRVATGR 147 Query: 125 GWNVQYLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTR 184 GWN QYLL AL++AGLSY DI P Y++NAAD A QSG+V A LWDPFLA E Sbjct: 148 GWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQSGSVQAVTLWDPFLAAAESQPG 207 Query: 185 PRILRDGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQL 244 + LRDG+GLSNNRTF+L+T ++ADQ++ +++ FAEL K + W A P E A LLAPQL Sbjct: 208 LKNLRDGSGLSNNRTFYLSTARYADQHRALLKTFFAELGKVSQWANAKPAEVAALLAPQL 267 Query: 245 GVDPKVLRLATERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVYGEALL 302 G+ +VL +A+ERR+Y V I I+ EQQ++ + F LGLI ++QV D VY ++L Sbjct: 268 GISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQGLGLIPRKLQVADAVYPASVL 325 >ref|NP_745665.1| aliphatic sulfonate ABC transporter periplasmic ligand-binding protein [Pseudomonas putida KT2440] gb|AAN69129.1|AE016546_10 ABC transporter, periplasmic substrate-binding protein, putative [Pseudomonas putida KT2440] Length = 328 Score = 342 bits (877), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 174/298 (58%), Positives = 217/298 (72%), Gaps = 2/298 (0%) Query: 7 WSNAAEE--RTLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNAD 64 WS A + RTLRIGYQKFN++NILKG+G LEKALAP G KV W EFAAGPQL EAL+ Sbjct: 30 WSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVKVSWHEFAAGPQLLEALSTG 89 Query: 65 AIDFGHAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGR 124 AID GHAAD PSVFA A+G VYLAAEQPYP+GIG+ V + + S+++LKGK+VA GR Sbjct: 90 AIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQDHLASVQDLKGKRVATGR 149 Query: 125 GWNVQYLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTR 184 GWN QYLL AL++AGLSY DI P Y++NAAD A QSG+V A LWDPFLA E Sbjct: 150 GWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQSGSVQAVTLWDPFLAAAESQPG 209 Query: 185 PRILRDGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQL 244 + LRDG+GLSNNRTF+L+T FADQ++ +++ FAEL K + W A P E A LLAPQL Sbjct: 210 LKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAELGKVSQWANAKPAEVAALLAPQL 269 Query: 245 GVDPKVLRLATERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVYGEALL 302 G+ +VL +A+ERR+Y V I I+ EQQ++ + F LGLI ++QV + VY ++L Sbjct: 270 GISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQGLGLIPRKLQVAEAVYPASVL 327