BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0025.p (434 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001355156.1| xenobiotic compound monooxygenase A subunit ... 753 0.0 ref|YP_004752865.1| putative dibenzothiophene desulfurization en... 753 0.0 ref|YP_003777963.1| thiophene oxidase [Herbaspirillum seropedica... 655 0.0 ref|YP_702578.1| dibenzothiophene desulfurization enzyme [Rhodoc... 485 e-135 gb|AAK63173.1| thiophene oxidizing enzyme [Rhodococcus wratislav... 484 e-134 >ref|YP_001355156.1| xenobiotic compound monooxygenase A subunit [Janthinobacterium sp. Marseille] gb|ABR89941.1| xenobiotic compound monooxygenase, DszA family, A subunit [Janthinobacterium sp. Marseille] Length = 436 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/435 (84%), Positives = 396/435 (91%), Gaps = 1/435 (0%) Query: 1 MTIHLAAFLIAGNAAHSQVLWRHPRSTPGGFLTLDYYKRIAQTLERGKFDLLFFADRLAV 60 M IHLAAFLIAGNAAHSQVLWRHP+S GGFL LDYY RIAQTLERGKFDLLFFADRLAV Sbjct: 1 MQIHLAAFLIAGNAAHSQVLWRHPQSQAGGFLKLDYYARIAQTLERGKFDLLFFADRLAV 60 Query: 61 STRFGGSHRYGVAHGDQDATRMDPLPVLGAIAAVTSRIGLGATRSTTYSQPYSLAREFST 120 STR+GG HRYGV+HGDQDATR+DPLPVLGA+AAVTS IGLGATRSTTYSQPYSLAREFST Sbjct: 61 STRYGGDHRYGVSHGDQDATRLDPLPVLGALAAVTSHIGLGATRSTTYSQPYSLAREFST 120 Query: 121 LDHLSAGRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEVTHKLWNSWDAQALL 180 LDHLS+GRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEV HKLW SW AL Sbjct: 121 LDHLSSGRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEVAHKLWGSWAPDALQ 180 Query: 181 LEAGSGRYADPDHVHAIDHRGTHFSVRGPLNIPASPQGGPVIIQAGSSHRGQDFAARWAE 240 LE G+YA+ D V+ I + G +F+V GPLNIP+SPQGGPVIIQAGSSHRGQDFAARWAE Sbjct: 181 LETAKGQYANADLVNPIAYEGKYFNVTGPLNIPSSPQGGPVIIQAGSSHRGQDFAARWAE 240 Query: 241 VVFGIQPDLARMQRFYQDLKSRTEKFCRKPADIKVLTALMPFVGKSKAAAEDKRARHNAM 300 VVFGIQPDL RMQRFYQDLK R EKF R P DIKVLTALMPFVGK++A AE+K A+HNA+ Sbjct: 241 VVFGIQPDLPRMQRFYQDLKGRAEKFGRSPKDIKVLTALMPFVGKTRAEAEEKLAQHNAL 300 Query: 301 V-DPIVGLSTLSSHMNVDFSAHALDAPIDDIQVAGMQGLFGLVKELSSEGRLTLADIGRL 359 V DP+VGLSTLSSHMNVDFSA+ LDAPI+D+QVAGMQGLF LVKELS E +LTLADIGRL Sbjct: 301 VDDPLVGLSTLSSHMNVDFSAYPLDAPIEDLQVAGMQGLFNLVKELSKERKLTLADIGRL 360 Query: 360 YAGGVLVPQVAGTAADIADWMEHIVAQQGADGFVITPAHLPEGFDDFVDLVVPELQRRGQ 419 YA GVLVPQVAGTA DIADWM +IVAQQGADGFVITPAHLP+GFDDFVDLVVPELQRRGQ Sbjct: 361 YARGVLVPQVAGTAVDIADWMGNIVAQQGADGFVITPAHLPDGFDDFVDLVVPELQRRGQ 420 Query: 420 FRLDYEGDTLRSYLR 434 FRLDYEGD+LRSYL+ Sbjct: 421 FRLDYEGDSLRSYLQ 435 >ref|YP_004752865.1| putative dibenzothiophene desulfurization enzyme [Collimonas fungivorans Ter331] gb|AEK62042.1| putative dibenzothiophene desulfurization enzyme [Collimonas fungivorans Ter331] Length = 444 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/432 (84%), Positives = 393/432 (90%) Query: 3 IHLAAFLIAGNAAHSQVLWRHPRSTPGGFLTLDYYKRIAQTLERGKFDLLFFADRLAVST 62 +HLAAFLIAGNAAHSQVLWRHP S PGGFL LDYY R+AQTLERGKFDLLFFADRLAVST Sbjct: 12 MHLAAFLIAGNAAHSQVLWRHPESNPGGFLKLDYYARVAQTLERGKFDLLFFADRLAVST 71 Query: 63 RFGGSHRYGVAHGDQDATRMDPLPVLGAIAAVTSRIGLGATRSTTYSQPYSLAREFSTLD 122 RFGG HRYGV HGDQDATR+DPLPVLGA+AA+TS+IGLGATRSTTYSQPYSLAREF+TLD Sbjct: 72 RFGGDHRYGVGHGDQDATRLDPLPVLGALAALTSKIGLGATRSTTYSQPYSLAREFATLD 131 Query: 123 HLSAGRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEVTHKLWNSWDAQALLLE 182 HLS+GRAAWNVVTSVNQGEADNFGLR+TL HD RYDRADEFL+V H+LW SW ALLLE Sbjct: 132 HLSSGRAAWNVVTSVNQGEADNFGLRQTLSHDARYDRADEFLDVAHQLWGSWAPDALLLE 191 Query: 183 AGSGRYADPDHVHAIDHRGTHFSVRGPLNIPASPQGGPVIIQAGSSHRGQDFAARWAEVV 242 A SGRYAD D V AI H G +F+VRGPLNIPASPQ GPVIIQAGSS RGQDFAARW+EVV Sbjct: 192 ASSGRYADADRVSAIAHSGAYFNVRGPLNIPASPQHGPVIIQAGSSQRGQDFAARWSEVV 251 Query: 243 FGIQPDLARMQRFYQDLKSRTEKFCRKPADIKVLTALMPFVGKSKAAAEDKRARHNAMVD 302 FGIQPDLARMQRFY DLK R KF RKP+DIKVLTA+MPFVG S+A AEDKRARHNA+VD Sbjct: 252 FGIQPDLARMQRFYHDLKGRAAKFGRKPSDIKVLTAVMPFVGASRAEAEDKRARHNALVD 311 Query: 303 PIVGLSTLSSHMNVDFSAHALDAPIDDIQVAGMQGLFGLVKELSSEGRLTLADIGRLYAG 362 PIVGLSTLSSHMNVDFS + LDAP+ D++VAGMQGLF L++ELS+E +LTLADIGR+YA Sbjct: 312 PIVGLSTLSSHMNVDFSGYVLDAPVADLEVAGMQGLFSLIRELSAERQLTLADIGRMYAS 371 Query: 363 GVLVPQVAGTAADIADWMEHIVAQQGADGFVITPAHLPEGFDDFVDLVVPELQRRGQFRL 422 GVLVPQVAGTAADIADWM HIVAQQGADGFVITP HLP GFDDFVDLVVPELQ+R QFRL Sbjct: 372 GVLVPQVAGTAADIADWMGHIVAQQGADGFVITPVHLPHGFDDFVDLVVPELQKRKQFRL 431 Query: 423 DYEGDTLRSYLR 434 DY+GDTLRSYL+ Sbjct: 432 DYQGDTLRSYLQ 443 >ref|YP_003777963.1| thiophene oxidase [Herbaspirillum seropedicae SmR1] gb|ADJ66055.1| thiophene oxidase protein [Herbaspirillum seropedicae SmR1] Length = 433 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/431 (74%), Positives = 368/431 (85%), Gaps = 2/431 (0%) Query: 3 IHLAAFLIAGNAAHSQVLWRHPRSTPGGFLTLDYYKRIAQTLERGKFDLLFFADRLAVST 62 +HLAAFLIAGNAAHSQ LWRHP+S GGFL LDYY IA+TLERGKFDLLFFADRLAVST Sbjct: 1 MHLAAFLIAGNAAHSQALWRHPQSRRGGFLELDYYLHIARTLERGKFDLLFFADRLAVST 60 Query: 63 RFGGSHRYGVAHGDQDATRMDPLPVLGAIAAVTSRIGLGATRSTTYSQPYSLAREFSTLD 122 R+G SH +G+ GDQDATR+DPLP+LGA+AA TS IGLGATRSTTYSQPYSLAREF+TLD Sbjct: 61 RYGDSHLHGLYIGDQDATRLDPLPILGALAAATSHIGLGATRSTTYSQPYSLAREFATLD 120 Query: 123 HLSAGRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEVTHKLWNSWDAQALLLE 182 HLS GRAAWNVVTSVNQGEADNFGL+ETL HD RYDRADEFLEVTHKLW+SW AL L+ Sbjct: 121 HLSGGRAAWNVVTSVNQGEADNFGLKETLPHDVRYDRADEFLEVTHKLWHSWQPDALRLQ 180 Query: 183 AGSGRYADPDHVHAIDHRGTHFSVRGPLNIPASPQGGPVIIQAGSSHRGQDFAARWAEVV 242 RYAD D V AIDH+G HFSVRGPLNIPASPQG PVIIQAGSS RGQDFAARWAEVV Sbjct: 181 --QDRYADADKVAAIDHQGAHFSVRGPLNIPASPQGHPVIIQAGSSDRGQDFAARWAEVV 238 Query: 243 FGIQPDLARMQRFYQDLKSRTEKFCRKPADIKVLTALMPFVGKSKAAAEDKRARHNAMVD 302 F IQPDL R+Q FY+DLK+R ++F R+P DI++L+A+MPFVG+S+ A + + + NA+ D Sbjct: 239 FNIQPDLPRLQAFYRDLKNRAQQFGRRPQDIRILSAVMPFVGQSRQHARELQEQANALAD 298 Query: 303 PIVGLSTLSSHMNVDFSAHALDAPIDDIQVAGMQGLFGLVKELSSEGRLTLADIGRLYAG 362 P+VGLSTLSSHMNVDFS ALDAP+ D+QV+G+QGLF L++ +S+E +LTLAD GRLYA Sbjct: 299 PLVGLSTLSSHMNVDFSGFALDAPLGDVQVSGIQGLFKLLRAISAERQLTLADAGRLYAQ 358 Query: 363 GVLVPQVAGTAADIADWMEHIVAQQGADGFVITPAHLPEGFDDFVDLVVPELQRRGQFRL 422 GVL PQ+AGTAAD+ADW++ I+ GADGFVI+P+HLP GFDDFVD V+PELQRRG FR Sbjct: 359 GVLTPQIAGTAADVADWLQSIIVANGADGFVISPSHLPYGFDDFVDQVIPELQRRGAFRQ 418 Query: 423 DYEGDTLRSYL 433 DY G LR +L Sbjct: 419 DYAGRQLRQHL 429 >ref|YP_702578.1| dibenzothiophene desulfurization enzyme [Rhodococcus jostii RHA1] gb|ABG94420.1| probable dibenzothiophene desulfurization enzyme [Rhodococcus jostii RHA1] Length = 452 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 241/431 (55%), Positives = 295/431 (68%), Gaps = 1/431 (0%) Query: 3 IHLAAFLIAGNAAHSQVLWRHPRSTPGGFLTLDYYKRIAQTLERGKFDLLFFADRLAVST 62 +HLA FLIA + HS WRHP S +L DYY+R+AQTLERGKFD LFFAD LA Sbjct: 5 LHLAGFLIASHVTHSHAAWRHPASETD-YLGPDYYRRVAQTLERGKFDFLFFADLLATPV 63 Query: 63 RFGGSHRYGVAHGDQDATRMDPLPVLGAIAAVTSRIGLGATRSTTYSQPYSLAREFSTLD 122 R+G R ++ G Q + +DP V +A VT +IGL T+STTY PY +AR F+TLD Sbjct: 64 RYGNDIRVPLSSGTQASATIDPSLVAAGLANVTEKIGLAITKSTTYFHPYEVARIFATLD 123 Query: 123 HLSAGRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEVTHKLWNSWDAQALLLE 182 HLS GRA WNVVTS+NQ EA NFG+ LGHDERYDRA EFLEV KLW SWD AL+ + Sbjct: 124 HLSRGRAGWNVVTSLNQAEAQNFGIENHLGHDERYDRAQEFLEVAFKLWGSWDRDALVRD 183 Query: 183 AGSGRYADPDHVHAIDHRGTHFSVRGPLNIPASPQGGPVIIQAGSSHRGQDFAARWAEVV 242 SG +ADPD V +DH G F RGPL +P SPQ PVIIQAGSS G+DFAARWAE + Sbjct: 184 KASGVFADPDKVRTVDHEGEWFKTRGPLTVPQSPQSRPVIIQAGSSSVGKDFAARWAEAI 243 Query: 243 FGIQPDLARMQRFYQDLKSRTEKFCRKPADIKVLTALMPFVGKSKAAAEDKRARHNAMVD 302 F I P + +Y D+KSR F R P DIK+ + +PFVG++++ A +K+A HN + D Sbjct: 244 FEIDPTSEGRKAYYDDVKSRASNFGRNPEDIKIFPSFVPFVGETESIAREKQAFHNELAD 303 Query: 303 PIVGLSTLSSHMNVDFSAHALDAPIDDIQVAGMQGLFGLVKELSSEGRLTLADIGRLYAG 362 PI GL T+S H + DFS + LDAPI+D+ V G QGLF + + LS + LTL DIG+LYA Sbjct: 304 PISGLITMSVHTDHDFSQYDLDAPIEDVVVPGTQGLFDVARRLSVKDNLTLRDIGKLYAQ 363 Query: 363 GVLVPQVAGTAADIADWMEHIVAQQGADGFVITPAHLPEGFDDFVDLVVPELQRRGQFRL 422 GVL+PQ GTA+ IAD +E ADG++++ A P FDDFVDLVVPELQRRG FR Sbjct: 364 GVLLPQFVGTASQIADQIEEGFLGGEADGYILSAAQAPGTFDDFVDLVVPELQRRGLFRT 423 Query: 423 DYEGDTLRSYL 433 DY G TLR +L Sbjct: 424 DYTGSTLRDHL 434 >gb|AAK63173.1| thiophene oxidizing enzyme [Rhodococcus wratislaviensis] Length = 452 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 242/431 (56%), Positives = 295/431 (68%), Gaps = 1/431 (0%) Query: 3 IHLAAFLIAGNAAHSQVLWRHPRSTPGGFLTLDYYKRIAQTLERGKFDLLFFADRLAVST 62 +HLA FLIA + HS WRHP S +L DYY+R+AQTLERGKFD LFFAD LA Sbjct: 5 LHLAGFLIASHVTHSHAAWRHPASETD-YLGPDYYRRVAQTLERGKFDFLFFADLLATPV 63 Query: 63 RFGGSHRYGVAHGDQDATRMDPLPVLGAIAAVTSRIGLGATRSTTYSQPYSLAREFSTLD 122 R+G R ++ G Q + +DP V +A VT +IGL T+STTY PY +AR F+TLD Sbjct: 64 RYGNDIRVPLSSGTQASATIDPSLVAAGLANVTEKIGLAITKSTTYFHPYEVARIFATLD 123 Query: 123 HLSAGRAAWNVVTSVNQGEADNFGLRETLGHDERYDRADEFLEVTHKLWNSWDAQALLLE 182 HLS GRA WNVVTS+NQ EA NFG+ LGHDERYDRA EFLEV KLW SWD AL+ + Sbjct: 124 HLSRGRAGWNVVTSLNQAEAQNFGIENHLGHDERYDRAQEFLEVAFKLWGSWDRDALVQD 183 Query: 183 AGSGRYADPDHVHAIDHRGTHFSVRGPLNIPASPQGGPVIIQAGSSHRGQDFAARWAEVV 242 SG +ADPD V +DH G F RGPL +P SPQ PVIIQAGSS G+DFAARWAE + Sbjct: 184 KASGVFADPDKVRTVDHEGEWFKTRGPLTVPHSPQSRPVIIQAGSSSVGKDFAARWAEAI 243 Query: 243 FGIQPDLARMQRFYQDLKSRTEKFCRKPADIKVLTALMPFVGKSKAAAEDKRARHNAMVD 302 F I P + +Y D+KSR F R P DIK+ + +PFVG++++ A +K+A HN + D Sbjct: 244 FEIDPTSEGRKAYYDDVKSRASNFGRNPDDIKIFPSFVPFVGETESIAREKQAFHNELAD 303 Query: 303 PIVGLSTLSSHMNVDFSAHALDAPIDDIQVAGMQGLFGLVKELSSEGRLTLADIGRLYAG 362 P+ GL TLS H + DFS + LDAPI+D+ V G QGLF + + LS E LTL DIG+LYA Sbjct: 304 PVSGLITLSVHTDHDFSQYDLDAPIEDVVVPGTQGLFDVARRLSVEDDLTLRDIGKLYAQ 363 Query: 363 GVLVPQVAGTAADIADWMEHIVAQQGADGFVITPAHLPEGFDDFVDLVVPELQRRGQFRL 422 GVL+PQ GTA+ IAD +E ADG++++ A P FDDFVDLVVPELQRRG FR Sbjct: 364 GVLLPQFVGTASQIADQIEEGFLGGEADGYILSAAQAPGTFDDFVDLVVPELQRRGLFRT 423 Query: 423 DYEGDTLRSYL 433 DY G TLR +L Sbjct: 424 DYTGSTLRDHL 434