BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0015.p (422 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778087.1| urea ABC transporter periplasmic protein [He... 822 0.0 ref|YP_004753495.1| urea ABC transporter urea binding protein [C... 817 0.0 ref|YP_001353496.1| branched-chain amino acid transport system s... 813 0.0 ref|YP_003981249.1| branched-chain amino acid transporter substr... 738 0.0 ref|YP_001628898.1| putative substrate-binding periplasmic trans... 734 0.0 >ref|YP_003778087.1| urea ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ66179.1| ABC-type urea transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 417 Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/421 (95%), Positives = 408/421 (96%), Gaps = 5/421 (1%) Query: 1 MSRRTILKATALGAFALAASSWLPAAFAADTIKVGILHSLSGTMAISETSLKDVALMTID 60 MSRRT+LKATALGAFALAASSWLP+AFAADTIKVGILHSLSGTMAISETSLKDVALMTID Sbjct: 1 MSRRTVLKATALGAFALAASSWLPSAFAADTIKVGILHSLSGTMAISETSLKDVALMTID 60 Query: 61 EINANGGVNGKKLEPVIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK 120 EINA GGV GKKLEPV+VDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK Sbjct: 61 EINAAGGVMGKKLEPVVVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK 120 Query: 121 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP 180 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPA EYLMSKEGGGAKRFVLLGTDYVYP Sbjct: 121 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPAVEYLMSKEGGGAKRFVLLGTDYVYP 180 Query: 181 RTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFAAGGKTAVISTINGDSN 240 RTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKF+AGGKTAVISTINGDSN Sbjct: 181 RTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTINGDSN 240 Query: 241 VPFYKELGNAGLKATDVPVVAFSVGEEELRGVDAXGVDAKPLVGHLAAWNYFESVKNPVN 300 VPFYKELGNAGLKATDVPVVAFSVGEEELR GVD KPLVGHLAAWNYFESVKNPVN Sbjct: 241 VPFYKELGNAGLKATDVPVVAFSVGEEELR-----GVDTKPLVGHLAAWNYFESVKNPVN 295 Query: 301 TAFIKKWKAYAKAKGLPNADTVVTNDPMEATYVGIYMWKQAVEKAKTTDTDKVIAAMGGQ 360 TAFIKKWK YAKAK LPNADTVVTNDPMEATYVGI+MW QAVEKAK+TDTDKVIAAMGGQ Sbjct: 296 TAFIKKWKEYAKAKNLPNADTVVTNDPMEATYVGIHMWAQAVEKAKSTDTDKVIAAMGGQ 355 Query: 361 TFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNESKQ 420 T+KAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVV KTKTTIRAQPWSPYIPGNESKQ Sbjct: 356 TYKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVYKTKTTIRAQPWSPYIPGNESKQ 415 Query: 421 K 421 K Sbjct: 416 K 416 >ref|YP_004753495.1| urea ABC transporter urea binding protein [Collimonas fungivorans Ter331] gb|AEK62672.1| Urea ABC transporter, urea binding protein [Collimonas fungivorans Ter331] Length = 439 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/422 (94%), Positives = 407/422 (96%), Gaps = 5/422 (1%) Query: 1 MSRRTILKATALGAFALAASSWLPAAFAADTIKVGILHSLSGTMAISETSLKDVALMTID 60 MSRRT+LKATALGAFALAAS+WLP+AFAADTIKVGILHSLSGTMAISETSLKDVALM I+ Sbjct: 23 MSRRTVLKATALGAFALAASAWLPSAFAADTIKVGILHSLSGTMAISETSLKDVALMAIE 82 Query: 61 EINANGGVNGKKLEPVIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK 120 EINANGGV GKKLEPV+VDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK Sbjct: 83 EINANGGVMGKKLEPVVVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK 142 Query: 121 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP 180 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP Sbjct: 143 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP 202 Query: 181 RTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFAAGGKTAVISTINGDSN 240 RTTNKILR+FLHSKGVKD+DIDEVYTPFGHSDYQTIVANIKKF+AGGKTAVISTINGDSN Sbjct: 203 RTTNKILRSFLHSKGVKDADIDEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTINGDSN 262 Query: 241 VPFYKELGNAGLKATDVPVVAFSVGEEELRGVDAXGVDAKPLVGHLAAWNYFESVKNPVN 300 VPFYKELGNAGLKATDVPVVAFSVGEEELR GVDAKPLVGHLAAWNYFESVKNPVN Sbjct: 263 VPFYKELGNAGLKATDVPVVAFSVGEEELR-----GVDAKPLVGHLAAWNYFESVKNPVN 317 Query: 301 TAFIKKWKAYAKAKGLPNADTVVTNDPMEATYVGIYMWKQAVEKAKTTDTDKVIAAMGGQ 360 TAFIKKWKAYA AK LPNA TVVTNDPMEATYVGIYMWKQAVEKAK+TDTDKVIAAM GQ Sbjct: 318 TAFIKKWKAYAVAKKLPNASTVVTNDPMEATYVGIYMWKQAVEKAKSTDTDKVIAAMSGQ 377 Query: 361 TFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNESKQ 420 FKAPSGY LEMD TNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNE KQ Sbjct: 378 KFKAPSGYELEMDATNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNEGKQ 437 Query: 421 KM 422 K+ Sbjct: 438 KL 439 >ref|YP_001353496.1| branched-chain amino acid transport system substrate-binding protein [Janthinobacterium sp. Marseille] gb|ABR88998.1| branched-chain amino acid transport system substrate-binding protein [Janthinobacterium sp. Marseille] Length = 417 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/422 (94%), Positives = 403/422 (95%), Gaps = 5/422 (1%) Query: 1 MSRRTILKATALGAFALAASSWLPAAFAADTIKVGILHSLSGTMAISETSLKDVALMTID 60 MSRR ILKATALGAF LA SSWLP+AFAADTIKVGILHSLSGTMAISETSLKDVALMTID Sbjct: 1 MSRRNILKATALGAFTLATSSWLPSAFAADTIKVGILHSLSGTMAISETSLKDVALMTID 60 Query: 61 EINANGGVNGKKLEPVIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK 120 EINANGGV GKKLE VIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK Sbjct: 61 EINANGGVMGKKLEAVIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVFK 120 Query: 121 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP 180 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP Sbjct: 121 ELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVYP 180 Query: 181 RTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFAAGGKTAVISTINGDSN 240 RTTNKILRAFLHSKGV+DSDIDEVYTPFGHSDYQTIVANIKKF+AGGKTAVISTINGDSN Sbjct: 181 RTTNKILRAFLHSKGVRDSDIDEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTINGDSN 240 Query: 241 VPFYKELGNAGLKATDVPVVAFSVGEEELRGVDAXGVDAKPLVGHLAAWNYFESVKNPVN 300 VPFYKELGNAGLKATDVPVVAFSVGEEELR GVD KPLVGHLAAWNYFESVKNPVN Sbjct: 241 VPFYKELGNAGLKATDVPVVAFSVGEEELR-----GVDTKPLVGHLAAWNYFESVKNPVN 295 Query: 301 TAFIKKWKAYAKAKGLPNADTVVTNDPMEATYVGIYMWKQAVEKAKTTDTDKVIAAMGGQ 360 FIKKWK YA AK LPNA TVVTNDPMEATYVG+YMWKQAVEKAK+TDTDKVIAAM GQ Sbjct: 296 AGFIKKWKDYAVAKKLPNAKTVVTNDPMEATYVGLYMWKQAVEKAKSTDTDKVIAAMAGQ 355 Query: 361 TFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNESKQ 420 TFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNE KQ Sbjct: 356 TFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNEGKQ 415 Query: 421 KM 422 K+ Sbjct: 416 KL 417 >ref|YP_003981249.1| branched-chain amino acid transporter substrate-binding protein [Achromobacter xylosoxidans A8] gb|ADP18534.1| branched-chain amino acid transport system substrate-binding protein [Achromobacter xylosoxidans A8] Length = 417 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/423 (85%), Positives = 382/423 (90%), Gaps = 7/423 (1%) Query: 1 MSRRTILKATALGAFALAASSWLPAAFAA-DTIKVGILHSLSGTMAISETSLKDVALMTI 59 M RR LK + LA S W+P AA DTIKVGILHSLSGTMAISETSLKDVALM I Sbjct: 1 MKRRLALKQLTAVSL-LAMSGWMPQVHAAEDTIKVGILHSLSGTMAISETSLKDVALMAI 59 Query: 60 DEINANGGVNGKKLEPVIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVF 119 +EINANGGV GKKLE V+VDPASNWPLFAEK+RQL+SQDKV+VVFGCWTSVSRKSVLPVF Sbjct: 60 EEINANGGVMGKKLEAVVVDPASNWPLFAEKSRQLLSQDKVAVVFGCWTSVSRKSVLPVF 119 Query: 120 KELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVY 179 KELN LLFYPVQYEGEELEKNVFYTGAAPNQQAIPA EYLMS++GGGAKRFVLLGTDYVY Sbjct: 120 KELNGLLFYPVQYEGEELEKNVFYTGAAPNQQAIPAVEYLMSEDGGGAKRFVLLGTDYVY 179 Query: 180 PRTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFAAGGKTAVISTINGDS 239 PRTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFA GGKTAVISTINGDS Sbjct: 180 PRTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFATGGKTAVISTINGDS 239 Query: 240 NVPFYKELGNAGLKATDVPVVAFSVGEEELRGVDAXGVDAKPLVGHLAAWNYFESVKNPV 299 NVPFYKELGNAGLKATDVPVVAFSVGEEELR GVDAKPLVGHLAAWNYF+SVKNPV Sbjct: 240 NVPFYKELGNAGLKATDVPVVAFSVGEEELR-----GVDAKPLVGHLAAWNYFQSVKNPV 294 Query: 300 NTAFIKKWKAYAKAKGLPNADTVVTNDPMEATYVGIYMWKQAVEKAKTTDTDKVIAAMGG 359 N AFI+KWKAYAK K LPNA+TVVTNDPMEATY+GI+MWKQAVE+AKTTD DKVIAAMGG Sbjct: 295 NDAFIQKWKAYAKTKNLPNANTVVTNDPMEATYIGIHMWKQAVEQAKTTDVDKVIAAMGG 354 Query: 360 QTFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNESK 419 Q F AP GYT+EMD TNHHLHKPV IGEIKADGQF+VV K+K IRAQPWSPYIPGNE K Sbjct: 355 QKFNAPDGYTIEMDPTNHHLHKPVYIGEIKADGQFSVVWKSKGPIRAQPWSPYIPGNEGK 414 Query: 420 QKM 422 Q + Sbjct: 415 QGL 417 >ref|YP_001628898.1| putative substrate-binding periplasmic transport protein [Bordetella petrii DSM 12804] emb|CAP40627.1| putative substrate-binding periplasmic transport protein [Bordetella petrii] Length = 416 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/423 (84%), Positives = 380/423 (89%), Gaps = 8/423 (1%) Query: 1 MSRRTILKA-TALGAFALAASSWLPAAFAADTIKVGILHSLSGTMAISETSLKDVALMTI 59 M RR +LK TA ALA W P AADTIKVGILHSLSGTMAISETSLKDVALMTI Sbjct: 1 MKRRLVLKQLTAASLMALAG--WAPGVMAADTIKVGILHSLSGTMAISETSLKDVALMTI 58 Query: 60 DEINANGGVNGKKLEPVIVDPASNWPLFAEKARQLISQDKVSVVFGCWTSVSRKSVLPVF 119 +EINA GGV GKKLEPV+VDPASNWPLFAEKARQLI+QDKV+VVFGCWTSVSRKSVLPVF Sbjct: 59 EEINAQGGVMGKKLEPVVVDPASNWPLFAEKARQLITQDKVAVVFGCWTSVSRKSVLPVF 118 Query: 120 KELNSLLFYPVQYEGEELEKNVFYTGAAPNQQAIPATEYLMSKEGGGAKRFVLLGTDYVY 179 KELN LLFYPVQYEGEELEKNVFYTGAAPNQQAIPA EYLMS++GGGA+RFVLLGTDYVY Sbjct: 119 KELNGLLFYPVQYEGEELEKNVFYTGAAPNQQAIPAVEYLMSEDGGGARRFVLLGTDYVY 178 Query: 180 PRTTNKILRAFLHSKGVKDSDIDEVYTPFGHSDYQTIVANIKKFAAGGKTAVISTINGDS 239 PRTTNKILRAFLHSKGVKD DI EVYTPFGHSDYQTIVANIK+FAAGG+TAV+STINGDS Sbjct: 179 PRTTNKILRAFLHSKGVKDDDIQEVYTPFGHSDYQTIVANIKRFAAGGRTAVVSTINGDS 238 Query: 240 NVPFYKELGNAGLKATDVPVVAFSVGEEELRGVDAXGVDAKPLVGHLAAWNYFESVKNPV 299 NVPFYKELGNAGLKATDVPVVAFSVGEEELR GVD KPLVGHLAAWNYF+S+KNPV Sbjct: 239 NVPFYKELGNAGLKATDVPVVAFSVGEEELR-----GVDTKPLVGHLAAWNYFQSIKNPV 293 Query: 300 NTAFIKKWKAYAKAKGLPNADTVVTNDPMEATYVGIYMWKQAVEKAKTTDTDKVIAAMGG 359 NTAFI+KWKAYAKA LPNA T VTNDPMEATY+GI+MWKQAVEKA TTD D VI A+GG Sbjct: 294 NTAFIEKWKAYAKAHNLPNAATAVTNDPMEATYIGIHMWKQAVEKAGTTDVDAVIGAVGG 353 Query: 360 QTFKAPSGYTLEMDKTNHHLHKPVMIGEIKADGQFNVVNKTKTTIRAQPWSPYIPGNESK 419 QT +AP G+T+EMDKTNHHLHKPV IGEIKADGQFNVV K+K IRAQPWSPYIPGNE K Sbjct: 354 QTLQAPDGFTVEMDKTNHHLHKPVYIGEIKADGQFNVVWKSKGPIRAQPWSPYIPGNEGK 413 Query: 420 QKM 422 Q + Sbjct: 414 QGL 416