BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0019.0012.p         (135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004753498.1| urea ABC transporter ATPase protein [Collimo...   145   2e-33
ref|YP_003778090.1| urea ABC transporter ATPase [Herbaspirillum ...   125   2e-27
ref|YP_001353499.1| branched-chain amino acid ABC transporter, A...   124   5e-27
ref|YP_001628901.1| putative ABC transport ATP-binding subunit [...   100   1e-19
gb|EGP47553.1| urea ABC transporter ATP-binding protein UrtD 2 [...    98   4e-19

>ref|YP_004753498.1| urea ABC transporter ATPase protein [Collimonas fungivorans
          Ter331]
 gb|AEK62675.1| Urea ABC transporter, ATPase protein [Collimonas fungivorans
          Ter331]
          Length = 288

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/78 (85%), Positives = 72/78 (92%)

Query: 1  MSEMYNRAAPQDSVDNNEHADHGTSYARIKPEGVDTTHGAILYLENITVSFDGFKAINNL 60
          +S++YN A P D VDN  HAD+GTSYARIKPEGVDTTHGAILYLENITVSFDGFKA+NNL
Sbjct: 5  ISQIYNPAQPSDKVDNALHADYGTSYARIKPEGVDTTHGAILYLENITVSFDGFKALNNL 64

Query: 61 NLDISVGELRCIIGPNGA 78
          NLDISVGELRCIIGPNGA
Sbjct: 65 NLDISVGELRCIIGPNGA 82


>ref|YP_003778090.1| urea ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ66182.1| urea transport system, ATPase component protein [Herbaspirillum
          seropedicae SmR1]
          Length = 289

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/59 (98%), Positives = 58/59 (98%)

Query: 20 ADHGTSYARIKPEGVDTTHGAILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGA 78
          ADHGTSY RIKPEGVDTTHGAILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGA
Sbjct: 25 ADHGTSYERIKPEGVDTTHGAILYLENITVSFDGFKAINNLNLDISVGELRCIIGPNGA 83


>ref|YP_001353499.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Janthinobacterium sp. Marseille]
 gb|ABR89439.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Janthinobacterium sp. Marseille]
          Length = 288

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 66/77 (85%)

Query: 2  SEMYNRAAPQDSVDNNEHADHGTSYARIKPEGVDTTHGAILYLENITVSFDGFKAINNLN 61
          SE   R+ P D  D++E+A++G +Y+R+KPEG+DT HG ILYLE+ITVSFDGFKAIN LN
Sbjct: 6  SEKMRRSEPSDRPDDSEYAEYGVTYSRLKPEGLDTAHGVILYLEDITVSFDGFKAINKLN 65

Query: 62 LDISVGELRCIIGPNGA 78
          LDISVGELRCIIGPNGA
Sbjct: 66 LDISVGELRCIIGPNGA 82


>ref|YP_001628901.1| putative ABC transport ATP-binding subunit [Bordetella petrii DSM
          12804]
 emb|CAP40630.1| putative ABC transport ATP-binding subunit [Bordetella petrii]
          Length = 283

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 2/77 (2%)

Query: 2  SEMYNRAAPQDSVDNNEHADHGTSYARIKPEGVDTTHGAILYLENITVSFDGFKAINNLN 61
          +E  NRAA   ++D++       SY R+ P GVDTTHGAILYL+ ITVSF+GFKA+N+L 
Sbjct: 3  TESRNRAAA--ALDDDGGPSGQASYGRVNPPGVDTTHGAILYLDGITVSFNGFKALNDLT 60

Query: 62 LDISVGELRCIIGPNGA 78
          LDI VGELRCIIGPNGA
Sbjct: 61 LDIGVGELRCIIGPNGA 77


>gb|EGP47553.1| urea ABC transporter ATP-binding protein UrtD 2 [Achromobacter
          xylosoxidans AXX-A]
          Length = 279

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 52/65 (80%), Gaps = 2/65 (3%)

Query: 14 VDNNEHADHGTSYARIKPEGVDTTHGAILYLENITVSFDGFKAINNLNLDISVGELRCII 73
          +D     D G  Y R+ P+G+DT+HGAILYLE ITVSFDGFKA+N+L LDI VGELRCII
Sbjct: 11 LDGGPSGDAG--YGRVSPKGLDTSHGAILYLEGITVSFDGFKALNDLTLDIGVGELRCII 68

Query: 74 GPNGA 78
          GPNGA
Sbjct: 69 GPNGA 73