BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0009.p (299 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001353501.1| urease accessory protein UreD [Janthinobacte... 463 e-128 ref|YP_003778092.1| urease accessory UreD protein [Herbaspirillu... 388 e-106 ref|YP_004753500.1| urease accessory protein [Collimonas fungivo... 363 1e-98 ref|ZP_08276124.1| Urease accessory protein UreD [Oxalobacterace... 339 3e-91 gb|AAS76787.1| UreD [Nitrosospira sp. NpAV] 331 8e-89 >ref|YP_001353501.1| urease accessory protein UreD [Janthinobacterium sp. Marseille] sp|A6SZ04.1|URED_JANMA RecName: Full=Urease accessory protein ureD gb|ABR89778.1| urease accessory protein UreD [Janthinobacterium sp. Marseille] Length = 296 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/299 (73%), Positives = 256/299 (85%), Gaps = 3/299 (1%) Query: 1 MKRIIDPAAAVTESGQTAAVAAPASRHQQARLTLGFADDAGTTRMIERSHFGPLRVQKPL 60 MKR+ D ++A+T + ++ + R+ QARL+L F DDAGTTRM ERSHFGPLRVQK L Sbjct: 1 MKRLSDTSSAITHTNKSGIASF---RNDQARLSLAFTDDAGTTRMTERSHFGPLRVQKTL 57 Query: 61 YPEHPAVCHAVIVHPPGGILGGDVLNITAHVGDKAHALLTTPGAGKWYRANGFVSQQQVA 120 YPEHPAVCHA+IVHPPGGI+GGD L ITA VGD+AHALLTTPGAGKWYRANG +SQQQV+ Sbjct: 58 YPEHPAVCHAIIVHPPGGIVGGDQLTITARVGDRAHALLTTPGAGKWYRANGQLSQQQVS 117 Query: 121 LTATAGAAMEWLPQETIFFNDADVRMEHQVELAADATYIGGEILCFGRTASGESFTDGRV 180 L A AA+EWLPQETIFFN+ADVR+EH V LAADA YIGGEILCFGRTASGE+F GRV Sbjct: 118 LEVGADAALEWLPQETIFFNEADVRLEHNVTLAADARYIGGEILCFGRTASGETFDSGRV 177 Query: 181 SQRTSIRRDGKLVWFEQGALRAGTSSMTSPLALAGYSVSATLIAVGLPLNAAFLGELREQ 240 +QRTSIRR GKL+WFEQGAL+A ++SM SPL+LAGY+V ATLIAVG +N AFL ELRE+ Sbjct: 178 AQRTSIRRGGKLLWFEQGALQARSTSMHSPLSLAGYTVCATLIAVGKTMNGAFLNELREE 237 Query: 241 TSALAHDGRSGATQMKQVLVLRYLGNSSQVARQWLTHAWQRIRPELMQREAIVPRIWNT 299 +SALA GRSGATQMKQVLV RYLG+SS+ AR W+T AWQRIRPELMQR+A++PRIWNT Sbjct: 238 SSALAQGGRSGATQMKQVLVARYLGHSSETARLWMTRAWQRIRPELMQRDAVIPRIWNT 296 >ref|YP_003778092.1| urease accessory UreD protein [Herbaspirillum seropedicae SmR1] gb|ADJ66184.1| urease accessory UreD protein [Herbaspirillum seropedicae SmR1] Length = 287 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/276 (68%), Positives = 219/276 (79%), Gaps = 2/276 (0%) Query: 26 RH--QQARLTLGFADDAGTTRMIERSHFGPLRVQKPLYPEHPAVCHAVIVHPPGGILGGD 83 RH QARL LGFADD GTTR++ R HFGPLRVQKPLYPE P++CHA+IVHPPGGI+GGD Sbjct: 12 RHAPDQARLALGFADDKGTTRLMRRQHFGPLRVQKPLYPEDPSICHAIIVHPPGGIVGGD 71 Query: 84 VLNITAHVGDKAHALLTTPGAGKWYRANGFVSQQQVALTATAGAAMEWLPQETIFFNDAD 143 L+ITA G++AHALLTTPGAGKWYRANG S+Q V L A AGA +EWLPQETIFF+ A+ Sbjct: 72 QLSITAEAGERAHALLTTPGAGKWYRANGQSSRQAVRLDAAAGATLEWLPQETIFFDGAE 131 Query: 144 VRMEHQVELAADATYIGGEILCFGRTASGESFTDGRVSQRTSIRRDGKLVWFEQGALRAG 203 VRMEH+V LAA+A Y+G EILCFGRTASGE+F G +SQRTSIRR GKLVWFEQG L+A Sbjct: 132 VRMEHEVTLAANAAYLGAEILCFGRTASGETFNTGAISQRTSIRRGGKLVWFEQGRLQAE 191 Query: 204 TSSMTSPLALAGYSVSATLIAVGLPLNAAFLGELREQTSALAHDGRSGATQMKQVLVLRY 263 +M PLAL G ++ TLIAVG ++AA LG LRE AL +GRSGAT MKQVL+ RY Sbjct: 192 AGAMQGPLALDGQTICGTLIAVGDGMDAALLGHLRETIGALQLEGRSGATLMKQVLIARY 251 Query: 264 LGNSSQVARQWLTHAWQRIRPELMQREAIVPRIWNT 299 +G SS VARQWL AW +RP + +EA +PRIWNT Sbjct: 252 MGQSSLVARQWLHAAWHVLRPAVTGKEAAIPRIWNT 287 >ref|YP_004753500.1| urease accessory protein [Collimonas fungivorans Ter331] gb|AEK62677.1| Urease accessory protein [Collimonas fungivorans Ter331] Length = 306 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 172/272 (63%), Positives = 217/272 (79%), Gaps = 1/272 (0%) Query: 29 QARLTLGFADDAGTTRMIERSHFGPLRVQKPLYPEHPAVCHAVIVHPPGGILGGDVLNIT 88 QA L+L FADD GTTR+++R+H+GPLRVQK LYPEHP++CHA+IVHPPGG++GGD L I Sbjct: 35 QAWLSLRFADDRGTTRLLDRAHYGPLRVQKALYPEHPSICHAIIVHPPGGVVGGDQLTIK 94 Query: 89 AHVGDKAHALLTTPGAGKWYRANGFVSQQQVALTATAGAAMEWLPQETIFFNDADVRMEH 148 A VG AHA LTTPGA KWY+ANG +SQQQV L A +EWLPQETIFF+ A+V + H Sbjct: 95 AGVGAGAHAFLTTPGAAKWYQANGKLSQQQVRLQLADSATLEWLPQETIFFDQAEVALTH 154 Query: 149 QVELAADATYIGGEILCFGRTASGESFTDGRVSQRTSIRRDGKLVWFEQGALRAGTSSMT 208 +VEL +A YIGGEILCFGRTASGE+F GR+SQ+TSIRRDGKL+WFEQG L G+++M Sbjct: 155 EVELQGEARYIGGEILCFGRTASGETFNRGRISQQTSIRRDGKLLWFEQGMLSGGSAAMH 214 Query: 209 SPLALAGYSVSATLIAVGLPLNAAFLGELREQTSALAHDGRS-GATQMKQVLVLRYLGNS 267 + L LAG +V ATL+ G P +A+ + +LRE S LA + S GA+Q+K VLVLR+LG+S Sbjct: 215 NRLGLAGCTVCATLMVAGKPFSASLVQQLRELASQLAGERASVGASQLKSVLVLRHLGHS 274 Query: 268 SQVARQWLTHAWQRIRPELMQREAIVPRIWNT 299 S++ARQW+ AWQ IRP+L+ EA++PRIWNT Sbjct: 275 SELARQWMMQAWQLIRPQLLGHEALIPRIWNT 306 >ref|ZP_08276124.1| Urease accessory protein UreD [Oxalobacteraceae bacterium IMCC9480] gb|EGF30400.1| Urease accessory protein UreD [Oxalobacteraceae bacterium IMCC9480] Length = 282 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 163/273 (59%), Positives = 200/273 (73%), Gaps = 5/273 (1%) Query: 27 HQQARLTLGFADDAGTTRMIERSHFGPLRVQKPLYPEHPAVCHAVIVHPPGGILGGDVLN 86 H QARL+LGF +DAGTTR+ R H GPLRVQK LYPEHP+VCHAVIVHPPGG++GGD L+ Sbjct: 15 HWQARLSLGFVNDAGTTRLTGREHVGPLRVQKALYPEHPSVCHAVIVHPPGGVVGGDQLD 74 Query: 87 ITAHVGDKAHALLTTPGAGKWYRANGFVSQQQVALTATAGAAMEWLPQETIFFNDADVRM 146 I VG A ++TPGA KWYRANG VS+Q V L AGA++EWLPQETIFFN+A VR+ Sbjct: 75 IAVRVGCDAAVFISTPGAAKWYRANGHVSRQTVRLEVAAGASLEWLPQETIFFNNAHVRL 134 Query: 147 EHQVELAADATYIGGEILCFGRTASGESFTDGRVSQRTSIRRDGKLVWFEQGALRAGTSS 206 + + L DATY G +ILCFGRTASGE+F G ++Q ++I RDGKL+WFEQG + S Sbjct: 135 DSAITLQGDATYFGCDILCFGRTASGETFNAGTITQHSTILRDGKLIWFEQGRIEGTGSV 194 Query: 207 MTSPLALAGYSVSATLIAVGLPLNAAFLGELREQTSALAHDGRSGATQMKQVLVLRYLGN 266 M SPL LAG +V ATL+ G L + L LRE + G TQMK +LV+R+LGN Sbjct: 195 MHSPLGLAGRTVCATLLVAGKSLTPSALTTLRETLGP-----QVGITQMKSILVVRHLGN 249 Query: 267 SSQVARQWLTHAWQRIRPELMQREAIVPRIWNT 299 SS+VAR+ + AWQ +RP L+ REA+VPRIWNT Sbjct: 250 SSEVARRLMMQAWQALRPLLLAREAVVPRIWNT 282 >gb|AAS76787.1| UreD [Nitrosospira sp. NpAV] Length = 312 Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 155/272 (56%), Positives = 204/272 (75%), Gaps = 1/272 (0%) Query: 29 QARLTLGFADDAGTTRMIERSHFGPLRVQKPLYPEHPAVCHAVIVHPPGGILGGDVLNIT 88 +ARL+L FA D GTTR++ R HFGPL VQKP YP+ +C AVI+HPPGG++GGD L+I Sbjct: 41 EARLSLTFAKDGGTTRLVGRDHFGPLLVQKPFYPDGQDLCQAVIIHPPGGVVGGDKLDIA 100 Query: 89 AHVGDKAHALLTTPGAGKWYRANGFVSQQQVALTATAGAAMEWLPQETIFFNDADVRMEH 148 VG A A +TTPGA KWY+ANG VS+Q + L AG +EW+PQETIFF+D +V ++H Sbjct: 101 VKVGAVAKAQITTPGAAKWYKANGHVSRQNIKLEVGAGGMLEWVPQETIFFDDVNVALDH 160 Query: 149 QVELAADATYIGGEILCFGRTASGESFTDGRVSQRTSIRRDGKLVWFEQGALRAGTSSMT 208 QV L +A+YIG EILCFGRTASGESFT G+++QR IRR+GKL+WFEQ L G+++M Sbjct: 161 QVVLEKEASYIGCEILCFGRTASGESFTKGQIAQRIGIRREGKLIWFEQLRLAGGSTAMK 220 Query: 209 SPLALAGYSVSATLIAVGLPLNAAFLGELREQTSALAHD-GRSGATQMKQVLVLRYLGNS 267 SPL LAG +V ATLIAVG ++ A L +RE+ A+A+ G G +++K V+V RY GNS Sbjct: 221 SPLVLAGNTVCATLIAVGKDVSPAILDTVREEAGAIANGAGHLGISRLKPVVVARYQGNS 280 Query: 268 SQVARQWLTHAWQRIRPELMQREAIVPRIWNT 299 S+ AR+ + H W +RPE++ REA+VPR+WNT Sbjct: 281 SETARRIMLHIWGLLRPEMLGREAMVPRMWNT 312