BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0034.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774923.1| 2-ketogluconate kinase [Herbaspirillum serop... 364 9e-99 ref|YP_001476297.1| ribokinase-like domain-containing protein [S... 298 8e-79 ref|ZP_06638053.1| 2-dehydro-3-deoxygluconokinase [Serratia odor... 295 8e-78 ref|ZP_06192404.1| ribokinase-like domain-containing protein [Se... 293 2e-77 ref|YP_004498493.1| 2-dehydro-3-deoxygluconokinase [Serratia sp.... 293 2e-77 >ref|YP_003774923.1| 2-ketogluconate kinase [Herbaspirillum seropedicae SmR1] gb|ADJ63015.1| 2-ketogluconate kinase protein [Herbaspirillum seropedicae SmR1] Length = 313 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 188/246 (76%), Positives = 201/246 (81%), Gaps = 1/246 (0%) Query: 1 MQPQLDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVG 60 M QLDVVT+GEALAL VADEVG F +VEKYTRRLAGAETNVAIGLARLGLKVGW SRVG Sbjct: 1 MTMQLDVVTWGEALALLVADEVGPFEEVEKYTRRLAGAETNVAIGLARLGLKVGWASRVG 60 Query: 61 NDSFGRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQ 120 ND+FGRFI +RVAQEGV+VS+V D EFRTAIQLKAKAV GADPAIEYYRKGSAASHLS Sbjct: 61 NDAFGRFIRQRVAQEGVEVSRVITDMEFRTAIQLKAKAVGGADPAIEYYRKGSAASHLSV 120 Query: 121 VDFDEAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQE 180 DFD YFG ARHLHATGIA ALS +TMAFAH A+DFMR +GKTISFDPNLRPMLWPSQE Sbjct: 121 DDFDAGYFGAARHLHATGIAPALSATTMAFAHQAMDFMRGQGKTISFDPNLRPMLWPSQE 180 Query: 181 VMAQKLNELAFKADWVLPGLSEGKILTGRSEPRDIARARRXR-RRLFPQCRRRRHRGGRR 239 VMAQ+LN LAFKADWVLPGLSEGKILTG + R+IA R +L R Sbjct: 181 VMAQQLNALAFKADWVLPGLSEGKILTGHDDAREIAGFYLERGVKLVVIKLGAEGAYWRN 240 Query: 240 GQGSGR 245 GQG GR Sbjct: 241 GQGEGR 246 >ref|YP_001476297.1| ribokinase-like domain-containing protein [Serratia proteamaculans 568] gb|ABV39169.1| PfkB domain protein [Serratia proteamaculans 568] Length = 319 Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 138/212 (65%), Positives = 169/212 (79%) Query: 5 LDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDSF 64 LDVVT GEA+A+FVA + GD A+VE +T+R+AGAE NVAIGLARLGL VGWVSRVGNDSF Sbjct: 12 LDVVTLGEAMAMFVASQTGDMAEVETFTKRIAGAELNVAIGLARLGLNVGWVSRVGNDSF 71 Query: 65 GRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDFD 124 GRF +++ +EG++ QV +D + T Q+K+K DG DP +EY+RKGSAASHLS DF+ Sbjct: 72 GRFALQQLKKEGINAQQVTVDGNYPTGFQIKSKTTDGTDPKVEYFRKGSAASHLSVDDFN 131 Query: 125 EAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMAQ 184 YFG ARHLH +G+AAALS ++A HHA MRA GKTISFDPNLRP+LW SQ+VM + Sbjct: 132 REYFGSARHLHLSGVAAALSGQSLALCHHAAREMRAMGKTISFDPNLRPVLWSSQQVMIE 191 Query: 185 KLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 +LN+LAF ADWVLPGL EG+ILTG+S P IA Sbjct: 192 QLNKLAFAADWVLPGLKEGQILTGQSTPEGIA 223 >ref|ZP_06638053.1| 2-dehydro-3-deoxygluconokinase [Serratia odorifera DSM 4582] gb|EFE96795.1| 2-dehydro-3-deoxygluconokinase [Serratia odorifera DSM 4582] Length = 319 Score = 295 bits (754), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 138/212 (65%), Positives = 168/212 (79%) Query: 5 LDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDSF 64 LDVVT GEA+A+FVA E GD A VE +T+R+AGAE NVAIGLARLGL VGWVSRVGND+F Sbjct: 12 LDVVTLGEAMAMFVAAETGDLAAVEHFTKRIAGAELNVAIGLARLGLNVGWVSRVGNDAF 71 Query: 65 GRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDFD 124 GRF +++ +EG++ QV +D + T Q+K+K DG DP +EY+RKGSAASHLS VDFD Sbjct: 72 GRFTLQQLQKEGINYQQVTVDGHYPTGFQIKSKTNDGTDPIVEYFRKGSAASHLSTVDFD 131 Query: 125 EAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMAQ 184 YFG ARHLH +G+AAALS ++ +H A MRA GKTISFDPNLRP+LW SQ+VM + Sbjct: 132 RDYFGAARHLHLSGVAAALSGQSLELSHFAAREMRAMGKTISFDPNLRPVLWSSQQVMIE 191 Query: 185 KLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 +LN+LAF ADWVLPGL EG+ILTG+S P IA Sbjct: 192 QLNKLAFAADWVLPGLKEGQILTGQSTPEGIA 223 >ref|ZP_06192404.1| ribokinase-like domain-containing protein [Serratia odorifera 4Rx13] gb|EFA14883.1| ribokinase-like domain-containing protein [Serratia odorifera 4Rx13] Length = 319 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 135/212 (63%), Positives = 168/212 (79%) Query: 5 LDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDSF 64 LDVVT GEA+A+FVA + GD A+VE +T+R+AGAE NVAIGLARLGL VGWVSRVGND+F Sbjct: 12 LDVVTLGEAMAMFVATQTGDLAEVETFTKRIAGAELNVAIGLARLGLNVGWVSRVGNDAF 71 Query: 65 GRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDFD 124 GRF +++ +EG++ QV +D + T Q+K+K DG DP++EY+RKGSAASHLS DF+ Sbjct: 72 GRFALQQLKKEGINFQQVTVDGNYPTGFQIKSKTTDGTDPSVEYFRKGSAASHLSTADFN 131 Query: 125 EAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMAQ 184 YFG ARHLH +G+AAALS ++ +HA MRA GKTISFDPNLRP+LW SQ+VM Sbjct: 132 RDYFGSARHLHLSGVAAALSGQSLELCNHAAREMRAMGKTISFDPNLRPVLWSSQQVMID 191 Query: 185 KLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 +LN+LAF ADWVLPGL EG+ILTG+S P IA Sbjct: 192 QLNKLAFAADWVLPGLKEGQILTGQSTPEGIA 223 >ref|YP_004498493.1| 2-dehydro-3-deoxygluconokinase [Serratia sp. AS12] ref|YP_004503445.1| 2-dehydro-3-deoxygluconokinase [Serratia sp. AS9] gb|AEF43184.1| 2-dehydro-3-deoxygluconokinase [Serratia sp. AS9] gb|AEF48136.1| 2-dehydro-3-deoxygluconokinase [Serratia sp. AS12] gb|AEG25844.1| 2-dehydro-3-deoxygluconokinase [Serratia sp. AS13] Length = 319 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 135/212 (63%), Positives = 168/212 (79%) Query: 5 LDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDSF 64 LDVVT GEA+A+FVA + GD A+VE +T+R+AGAE NVAIGLARLGL VGWVSRVGND+F Sbjct: 12 LDVVTLGEAMAMFVATQTGDLAEVETFTKRIAGAELNVAIGLARLGLNVGWVSRVGNDAF 71 Query: 65 GRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDFD 124 GRF +++ +EG++ QV +D + T Q+K+K DG DP++EY+RKGSAASHLS DF+ Sbjct: 72 GRFAVQQLKKEGINFQQVTVDGNYPTGFQIKSKTTDGTDPSVEYFRKGSAASHLSTADFN 131 Query: 125 EAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMAQ 184 YFG ARHLH +G+AAALS ++ +HA MRA GKTISFDPNLRP+LW SQ+VM Sbjct: 132 RDYFGSARHLHLSGVAAALSGKSLELCNHAAREMRAMGKTISFDPNLRPVLWSSQQVMID 191 Query: 185 KLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 +LN+LAF ADWVLPGL EG+ILTG+S P IA Sbjct: 192 QLNKLAFAADWVLPGLKEGQILTGQSTPEGIA 223