BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0023.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774901.1| formate dehydrogenase regulatory subunit [He... 426 e-117 ref|YP_004751542.1| formate dehydrogenase chain D [Collimonas fu... 395 e-108 ref|YP_001101653.1| formate dehydrogenase formation protein subu... 395 e-108 ref|YP_001355341.1| formate dehydrogenase associated protein [Ja... 393 e-107 ref|ZP_04578059.1| FdsC protein [Oxalobacter formigenes OXCC13] ... 339 2e-91 >ref|YP_003774901.1| formate dehydrogenase regulatory subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62993.1| formate dehydrogenase regulatory subunit protein [Herbaspirillum seropedicae SmR1] Length = 280 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/280 (77%), Positives = 240/280 (85%), Gaps = 1/280 (0%) Query: 1 MNACPLPSPDDVSAAAEFATAAKVEVEKWRDGQREVVTDVVAEEVPIALEYNGISHAVMM 60 MN SP + ++AT V+V++WRDGQRE V DVVAEEVPIALEYNGISHAVMM Sbjct: 1 MNTSKPSSPLIDDSTGDYATFTHVQVDRWRDGQRETVEDVVAEEVPIALEYNGISHAVMM 60 Query: 61 ATPADLEDFALGFSLTEGILADPGELYDCEIVQGAEGIQVQMNVATERFIALKEKRRNLT 120 ATPADLEDFALGFSLTEGILADP ELY+CEIV G EG+QVQM +ATERF+ALKEKRRNLT Sbjct: 61 ATPADLEDFALGFSLTEGILADPSELYECEIVPGCEGVQVQMRIATERFVALKEKRRNLT 120 Query: 121 GRTGCGLCGAETLEQAVRHPAAVQAGALRFSADTLHAALDAMQARQELQQQTGATHAAAW 180 GRTGCGLCGAETLEQAVRHP AVQ GA FS +HAA + MQA Q+LQQ TGATHAAAW Sbjct: 121 GRTGCGLCGAETLEQAVRHPQAVQGGA-SFSVQQVHAAFEQMQAGQQLQQATGATHAAAW 179 Query: 181 LGRDGKIKLVREDVGRHNALDKLIGALAEDKQDFSAGAVIITSRASYEMVQKAATVGIGF 240 + G+I LVREDVGRHNALDKLIGALAE+ +DF+ GA IITSRASYEMVQKAATVGI F Sbjct: 180 MDASGRIVLVREDVGRHNALDKLIGALAEEGEDFAQGAAIITSRASYEMVQKAATVGISF 239 Query: 241 IAAISAPTALAIRLAKETDVTLIGFVRRQGHVVYAGPHRL 280 IAA+SAPTALAIRLA+ETDVTL+GFVR+QGHVVYA PHRL Sbjct: 240 IAAVSAPTALAIRLAEETDVTLLGFVRKQGHVVYARPHRL 279 >ref|YP_004751542.1| formate dehydrogenase chain D [Collimonas fungivorans Ter331] gb|AEK60719.1| Formate dehydrogenase chain D [Collimonas fungivorans Ter331] Length = 271 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 194/267 (72%), Positives = 230/267 (86%), Gaps = 3/267 (1%) Query: 17 EFATAAKVEVEKWRDGQREVVTDVVAEEVPIALEYNGISHAVMMATPADLEDFALGFSLT 76 E+A++ +VEVE+WR+G DVVAEEVP+ALEYNGISHAVMMA+PADLEDFALGFSLT Sbjct: 5 EYASSTEVEVEQWRNGAVGKSRDVVAEEVPVALEYNGISHAVMMASPADLEDFALGFSLT 64 Query: 77 EGILADPGELYDCEIVQGAEGIQVQMNVATERFIALKEKRRNLTGRTGCGLCGAETLEQA 136 EGIL D EL+DCE+V A+GIQVQM +ATERF+ALKEKRRNLTGRTGCGLCGAETL+QA Sbjct: 65 EGILQDRSELFDCEVVTAADGIQVQMQIATERFVALKEKRRNLTGRTGCGLCGAETLQQA 124 Query: 137 VRHPAAVQAGALRFSADTLHAALDAMQARQELQQQTGATHAAAWLGRDGKIKLVREDVGR 196 VR PA V + A RFSA ++AA+ MQ +Q LQ+ TGATHAAAWL DGKI LVREDVGR Sbjct: 125 VRKPAPVLSAA-RFSAAGIYAAMAEMQQQQHLQKVTGATHAAAWLQADGKIALVREDVGR 183 Query: 197 HNALDKLIGALAED--KQDFSAGAVIITSRASYEMVQKAATVGIGFIAAISAPTALAIRL 254 HNALDKLIGAL+++ ++DFS+GAV+ITSRASYEMVQKAA++ GFI A+SAPTALAIRL Sbjct: 184 HNALDKLIGALSQENPRRDFSSGAVLITSRASYEMVQKAASMSCGFIVAVSAPTALAIRL 243 Query: 255 AKETDVTLIGFVRRQGHVVYAGPHRLI 281 A++ +VTL+GFVR+ GHVVYA P RL+ Sbjct: 244 AEQANVTLLGFVRQPGHVVYAHPQRLL 270 >ref|YP_001101653.1| formate dehydrogenase formation protein subunit FdsC [Herminiimonas arsenicoxydans] emb|CAL63532.1| Formate dehydrogenase, accessory protein [Herminiimonas arsenicoxydans] Length = 276 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 189/259 (72%), Positives = 217/259 (83%), Gaps = 1/259 (0%) Query: 23 KVEVEKWRDGQREVVTDVVAEEVPIALEYNGISHAVMMATPADLEDFALGFSLTEGILAD 82 +V VEKW +RE D VAEEVPIALEYNGISHAVM+A+P DLEDFALGFSL+EGIL D Sbjct: 14 RVSVEKWDADRREFCEDDVAEEVPIALEYNGISHAVMLASPYDLEDFALGFSLSEGILKD 73 Query: 83 PGELYDCEIVQGAEGIQVQMNVATERFIALKEKRRNLTGRTGCGLCGAETLEQAVRHPAA 142 P ELYDCE+V G EGIQVQM +ATERF+ALK+KRRNLTGRTGCGLCGAETL QAVRHP A Sbjct: 74 PSELYDCEVVPGCEGIQVQMQIATERFVALKDKRRNLTGRTGCGLCGAETLAQAVRHPDA 133 Query: 143 VQAGALRFSADTLHAALDAMQARQELQQQTGATHAAAWLGRDGKIKLVREDVGRHNALDK 202 V G FS + +HA + AMQA+Q LQ+ TGATHAAAW+ DG I LVRED+GRHNALDK Sbjct: 134 VTGGT-SFSGEQIHAGMKAMQAQQRLQRHTGATHAAAWMNADGSIDLVREDIGRHNALDK 192 Query: 203 LIGALAEDKQDFSAGAVIITSRASYEMVQKAATVGIGFIAAISAPTALAIRLAKETDVTL 262 LIGA+A +K+DF GA +ITSRASYEMVQK+AT+GI F+AAISAPT+LAI+LA+E +VTL Sbjct: 193 LIGAMANEKRDFGHGAALITSRASYEMVQKSATMGIAFLAAISAPTSLAIKLAEEANVTL 252 Query: 263 IGFVRRQGHVVYAGPHRLI 281 +GFVR HVVYA HRLI Sbjct: 253 VGFVRSNSHVVYAQSHRLI 271 >ref|YP_001355341.1| formate dehydrogenase associated protein [Janthinobacterium sp. Marseille] gb|ABR89680.1| formate dehydrogenase associated protein [Janthinobacterium sp. Marseille] Length = 275 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/259 (72%), Positives = 220/259 (84%), Gaps = 1/259 (0%) Query: 23 KVEVEKWRDGQREVVTDVVAEEVPIALEYNGISHAVMMATPADLEDFALGFSLTEGILAD 82 +V VEKW Q + D VAEEVPIALEYNGISHAVM+A+P DLEDFALGFSL+EGIL D Sbjct: 14 RVPVEKWDADQHTICEDDVAEEVPIALEYNGISHAVMLASPYDLEDFALGFSLSEGILKD 73 Query: 83 PGELYDCEIVQGAEGIQVQMNVATERFIALKEKRRNLTGRTGCGLCGAETLEQAVRHPAA 142 ELYDCE+V G EGIQVQM +ATERF+ LK+KRRN+TGRTGCGLCGAETLEQA+RHP A Sbjct: 74 KSELYDCEVVPGCEGIQVQMRIATERFVTLKDKRRNMTGRTGCGLCGAETLEQAIRHPQA 133 Query: 143 VQAGALRFSADTLHAALDAMQARQELQQQTGATHAAAWLGRDGKIKLVREDVGRHNALDK 202 A+ FSA ++A + AM+++Q LQ+ TGATHAAAWL DG + LVREDVGRHNALDK Sbjct: 134 TVGHAM-FSARQIYAGMKAMKSQQRLQKHTGATHAAAWLNLDGSVDLVREDVGRHNALDK 192 Query: 203 LIGALAEDKQDFSAGAVIITSRASYEMVQKAATVGIGFIAAISAPTALAIRLAKETDVTL 262 LIGA+A+DK+DF+ GA +ITSRASYEMVQK+AT+GIGF+AAISAPT+LAI+LA+ET+VTL Sbjct: 193 LIGAMADDKRDFTQGAALITSRASYEMVQKSATMGIGFLAAISAPTSLAIQLAEETNVTL 252 Query: 263 IGFVRRQGHVVYAGPHRLI 281 IGFVR Q HVVYA HRLI Sbjct: 253 IGFVRDQSHVVYAQAHRLI 271 >ref|ZP_04578059.1| FdsC protein [Oxalobacter formigenes OXCC13] gb|EEO29032.1| FdsC protein [Oxalobacter formigenes OXCC13] Length = 266 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 203/264 (76%), Gaps = 1/264 (0%) Query: 18 FATAAKVEVEKWRDGQREVVTDVVAEEVPIALEYNGISHAVMMATPADLEDFALGFSLTE 77 + TA KV V W++GQ+ + D VAEEVP+AL YNGISHAVM+ATPADLEDFALGFSLTE Sbjct: 4 YDTAEKVSVCHWKNGQKVLRDDTVAEEVPVALVYNGISHAVMLATPADLEDFALGFSLTE 63 Query: 78 GILADPGELYDCEIVQGAEGIQVQMNVATERFIALKEKRRNLTGRTGCGLCGAETLEQAV 137 GI+ P E+Y EIV+ GI+V+M++A+ERF LKE+RRNLTGRTGCGLCG ++L QAV Sbjct: 64 GIIEVPEEIYGTEIVEVENGIRVEMDIASERFQYLKERRRNLTGRTGCGLCGTDSLSQAV 123 Query: 138 RHPAAVQAGALRFSADTLHAALDAMQARQELQQQTGATHAAAWLGRDGKIKLVREDVGRH 197 R P V + + FS + +H + M Q L+++TGATHAAAWL +G + LVREDVGRH Sbjct: 124 RMPPLVMSNPV-FSTEVIHWGFEKMDELQLLKKKTGATHAAAWLDANGNVGLVREDVGRH 182 Query: 198 NALDKLIGALAEDKQDFSAGAVIITSRASYEMVQKAATVGIGFIAAISAPTALAIRLAKE 257 NALDKLIGAL K D S GA ++TSRASYEMVQK + GIG +AA+SAPTALAI++A E Sbjct: 183 NALDKLIGALVRQKADRSTGAALVTSRASYEMVQKCGSAGIGMLAAVSAPTALAIQIANE 242 Query: 258 TDVTLIGFVRRQGHVVYAGPHRLI 281 ++TL+GFVR GH VYA P RL+ Sbjct: 243 INLTLLGFVRENGHTVYAHPQRLV 266