BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0015.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774892.1| tartrate dehydrogenase [Herbaspirillum serop... 655 0.0 ref|YP_935362.1| tartrate dehydrogenase [Azoarcus sp. BH72] >gi|... 620 e-175 dbj|BAD81015.1| tartrate dehydrogenase [uncultured bacterium] 604 e-171 ref|YP_001352927.1| tartrate dehydrogenase [Janthinobacterium sp... 595 e-168 ref|YP_001585974.1| tartrate dehydrogenase [Burkholderia multivo... 585 e-165 >ref|YP_003774892.1| tartrate dehydrogenase [Herbaspirillum seropedicae SmR1] emb|CAM32565.1| Tartrate dehydrogenase protein [Herbaspirillum seropedicae] gb|ADJ62984.1| tartrate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 359 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/359 (87%), Positives = 335/359 (93%), Gaps = 1/359 (0%) Query: 1 MTK-HKVAVIAGDGIGQEVIPEGLRAVDAAAKKFGIEIEYTHFDWAHCGYYAKHGKMMPD 59 M+K H++AVIAGDGIGQEV+PEGLRAV AA+KKFGI+IE+THFDWAHC YYA+HGKMMPD Sbjct: 1 MSKTHRIAVIAGDGIGQEVMPEGLRAVQAASKKFGIDIEFTHFDWAHCNYYAEHGKMMPD 60 Query: 60 DWFDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA 119 DWF+QLKGFEAI+FGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA Sbjct: 61 DWFEQLKGFEAIYFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA 120 Query: 120 GRKPGDIDFYVVRENTEGEYSSIGGRMYEGTDREIVIQESVFTRHGVDRILKFAYDLAQS 179 RKPGDIDFYVVRENTEGEYSSIGGRMYEGT+RE VIQESVF+R G DRILKFA+DLAQS Sbjct: 121 NRKPGDIDFYVVRENTEGEYSSIGGRMYEGTERETVIQESVFSRKGTDRILKFAFDLAQS 180 Query: 180 RPKKHLTSATKSNGIAITMPYWDERVEAMGKNYGDVKTDKYHIDILTAHFVLNPQRFDVV 239 RPKKHLTSATKSNGIAITMPYWDERVEAMG Y DV+ DKYHIDILTAHFVLNP RFDVV Sbjct: 181 RPKKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVV 240 Query: 240 VAPNLFGDILSDLGPACAGTIGIAPTANLNPDRKLPSLFEPVHGSAPDIAGKNIANPVAT 299 VA NLFGDILSDLGPACAGTIGIAP+AN+NP R+LPSLFEPVHGSAPDI GKNIANPVA Sbjct: 241 VASNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVAM 300 Query: 300 IWSGAMMLDFLGNGNPKYKQAHDAILAAIETVLVAGPKTPDLGGSGDTTSVGKAIAAAI 358 IWSGAMMLDFLG+G KY+QAHDA+LAAIETVLV GP TPDLGG +T VG+AIAAAI Sbjct: 301 IWSGAMMLDFLGDGQGKYRQAHDAMLAAIETVLVNGPTTPDLGGKSNTAEVGQAIAAAI 359 >ref|YP_935362.1| tartrate dehydrogenase [Azoarcus sp. BH72] emb|CAL96476.1| tartrate dehydrogenase [Azoarcus sp. BH72] Length = 359 Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust. Identities = 290/357 (81%), Positives = 324/357 (90%) Query: 2 TKHKVAVIAGDGIGQEVIPEGLRAVDAAAKKFGIEIEYTHFDWAHCGYYAKHGKMMPDDW 61 T H++AVIAGDGIGQEV+PEGLRAV AAA KF I +E+THFDWAHC YY +HGKMMPDDW Sbjct: 3 TPHRIAVIAGDGIGQEVMPEGLRAVQAAAAKFDIALEFTHFDWAHCDYYLQHGKMMPDDW 62 Query: 62 FDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLAGR 121 F+QLKGF+AIFFGAVGWP VPDH+SLWGSLLKFRRDFD YVNLRPVRLMPGVPCPLA + Sbjct: 63 FEQLKGFDAIFFGAVGWPDKVPDHISLWGSLLKFRRDFDQYVNLRPVRLMPGVPCPLANK 122 Query: 122 KPGDIDFYVVRENTEGEYSSIGGRMYEGTDREIVIQESVFTRHGVDRILKFAYDLAQSRP 181 K GDIDFYVVRENTEGEYSS+GG+MYEGT+RE V+QES+FTR GVDRILK+A++LAQ RP Sbjct: 123 KVGDIDFYVVRENTEGEYSSVGGKMYEGTERETVLQESIFTRKGVDRILKYAFELAQKRP 182 Query: 182 KKHLTSATKSNGIAITMPYWDERVEAMGKNYGDVKTDKYHIDILTAHFVLNPQRFDVVVA 241 KKHLTSATKSNGIAI+MPYWD RV+ MGK Y +VK D+YHIDILTA FVL+P+RFDVVVA Sbjct: 183 KKHLTSATKSNGIAISMPYWDGRVKEMGKAYPEVKWDQYHIDILTARFVLSPERFDVVVA 242 Query: 242 PNLFGDILSDLGPACAGTIGIAPTANLNPDRKLPSLFEPVHGSAPDIAGKNIANPVATIW 301 NLFGDILSDLGPACAGTIGIAP+ANLNPDR PSLFEPVHGSAPDI G+NIANPVA IW Sbjct: 243 SNLFGDILSDLGPACAGTIGIAPSANLNPDRTFPSLFEPVHGSAPDIYGRNIANPVAMIW 302 Query: 302 SGAMMLDFLGNGNPKYKQAHDAILAAIETVLVAGPKTPDLGGSGDTTSVGKAIAAAI 358 SGAMMLDFLGNG+ +Y AHDAI+ AIETVLV GP+TPD+GG+ +TT VGKA+AAAI Sbjct: 303 SGAMMLDFLGNGDARYTAAHDAIVKAIETVLVEGPRTPDMGGTANTTEVGKAVAAAI 359 >dbj|BAD81015.1| tartrate dehydrogenase [uncultured bacterium] Length = 361 Score = 604 bits (1557), Expect = e-171, Method: Compositional matrix adjust. Identities = 275/356 (77%), Positives = 321/356 (90%) Query: 3 KHKVAVIAGDGIGQEVIPEGLRAVDAAAKKFGIEIEYTHFDWAHCGYYAKHGKMMPDDWF 62 KH++AVIAGDGIGQEV+PEGLR +DAA ++FG+++E+ FDWAHC YY +HG+MMPDDWF Sbjct: 2 KHRIAVIAGDGIGQEVMPEGLRVLDAACRQFGLDLEFVSFDWAHCDYYLQHGQMMPDDWF 61 Query: 63 DQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLAGRK 122 QLK F+AI+FGAVGWPATVPD++SLWGSLLKFRR+FD Y N+RPVRLMPG+PCPLAG++ Sbjct: 62 AQLKDFDAIYFGAVGWPATVPDYISLWGSLLKFRREFDQYANVRPVRLMPGIPCPLAGKQ 121 Query: 123 PGDIDFYVVRENTEGEYSSIGGRMYEGTDREIVIQESVFTRHGVDRILKFAYDLAQSRPK 182 GDIDFYV+RENTEGEYS++GGRM+EGT+RE VIQES+FTR G DRILKFA+DLAQ RPK Sbjct: 122 VGDIDFYVIRENTEGEYSAVGGRMFEGTERETVIQESIFTRQGTDRILKFAFDLAQRRPK 181 Query: 183 KHLTSATKSNGIAITMPYWDERVEAMGKNYGDVKTDKYHIDILTAHFVLNPQRFDVVVAP 242 KHLTSATKSNGIAI+MPYWDERVEAM +Y +V+ DKYHIDILTA FVL+P+RFDVVVA Sbjct: 182 KHLTSATKSNGIAISMPYWDERVEAMAGHYPEVRWDKYHIDILTARFVLSPERFDVVVAS 241 Query: 243 NLFGDILSDLGPACAGTIGIAPTANLNPDRKLPSLFEPVHGSAPDIAGKNIANPVATIWS 302 NLFGDILSDLGPAC GTIGIAP+ANLNPDR PSLFEPVHGSAPDIAG+ IANPVA IWS Sbjct: 242 NLFGDILSDLGPACTGTIGIAPSANLNPDRTFPSLFEPVHGSAPDIAGQGIANPVAMIWS 301 Query: 303 GAMMLDFLGNGNPKYKQAHDAILAAIETVLVAGPKTPDLGGSGDTTSVGKAIAAAI 358 GAMMLDFLG G+ +Y+ AHDAI+AAIE VLV GP+TPD+GG+ T +G+AIAAA+ Sbjct: 302 GAMMLDFLGQGDSRYQAAHDAIMAAIEQVLVGGPRTPDMGGTASTVELGRAIAAAL 357 >ref|YP_001352927.1| tartrate dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR88259.1| tartrate dehydrogenase [Janthinobacterium sp. Marseille] Length = 358 Score = 595 bits (1533), Expect = e-168, Method: Compositional matrix adjust. Identities = 277/358 (77%), Positives = 314/358 (87%) Query: 1 MTKHKVAVIAGDGIGQEVIPEGLRAVDAAAKKFGIEIEYTHFDWAHCGYYAKHGKMMPDD 60 M HK+AVIAGDGIG EV+PEGLR ++AAA+KF + +E+T +WA+C YY KHG+MMPDD Sbjct: 1 MKTHKIAVIAGDGIGNEVMPEGLRVLEAAARKFNLALEFTTMEWANCEYYLKHGQMMPDD 60 Query: 61 WFDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLAG 120 W QL+GFEAI+FGA G PA VPDH+SLWGSL+KFRRDFD YVNLRPVRLMPGVPCPLA Sbjct: 61 WRQQLEGFEAIYFGAAGMPALVPDHISLWGSLIKFRRDFDQYVNLRPVRLMPGVPCPLAN 120 Query: 121 RKPGDIDFYVVRENTEGEYSSIGGRMYEGTDREIVIQESVFTRHGVDRILKFAYDLAQSR 180 RKPGDIDFYVVRENTEGEYS++GG+ +EGT+ E V Q ++F+RHG DRILK+A++LAQSR Sbjct: 121 RKPGDIDFYVVRENTEGEYSAVGGKSFEGTEYEFVSQNAIFSRHGTDRILKYAFELAQSR 180 Query: 181 PKKHLTSATKSNGIAITMPYWDERVEAMGKNYGDVKTDKYHIDILTAHFVLNPQRFDVVV 240 PKKHLTSATKSNGI+I+MPYWD RVEAM +Y DV DKYHIDIL A FVL+P+RFDVVV Sbjct: 181 PKKHLTSATKSNGISISMPYWDSRVEAMAPSYADVHWDKYHIDILCARFVLSPERFDVVV 240 Query: 241 APNLFGDILSDLGPACAGTIGIAPTANLNPDRKLPSLFEPVHGSAPDIAGKNIANPVATI 300 A NLFGDILSDLGPAC GTIGIAP+ANLNP+RK PSLFEPVHGSAPDI GKNIANP+ I Sbjct: 241 ASNLFGDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVHGSAPDIFGKNIANPIGMI 300 Query: 301 WSGAMMLDFLGNGNPKYKQAHDAILAAIETVLVAGPKTPDLGGSGDTTSVGKAIAAAI 358 WSGAMMLDFLGNG+ YK AHDAI+ AIETVLV GP TPDLGGSG+TT VGKAIAAAI Sbjct: 301 WSGAMMLDFLGNGDANYKAAHDAIMQAIETVLVQGPNTPDLGGSGNTTDVGKAIAAAI 358 >ref|YP_001585974.1| tartrate dehydrogenase [Burkholderia multivorans ATCC 17616] ref|YP_001941325.1| tartrate dehydrogenase [Burkholderia multivorans ATCC 17616] gb|ABX19682.1| tartrate dehydrogenase [Burkholderia multivorans ATCC 17616] dbj|BAG47335.1| tartrate dehydrogenase [Burkholderia multivorans ATCC 17616] Length = 359 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 265/354 (74%), Positives = 315/354 (88%) Query: 5 KVAVIAGDGIGQEVIPEGLRAVDAAAKKFGIEIEYTHFDWAHCGYYAKHGKMMPDDWFDQ 64 K+A IAGDGIGQEV+PEG+R + AA KFG+ +E+THF+WA C YY +HGKMMPDDWF+ Sbjct: 6 KIAAIAGDGIGQEVMPEGVRVLQAACAKFGLNLEFTHFEWASCDYYLQHGKMMPDDWFET 65 Query: 65 LKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLAGRKPG 124 L+G++AI+FGAVGWP VPDH+SLWGSLLKFRR+FD YVNLRPVRL+PGVPCPLA RKPG Sbjct: 66 LRGYDAIYFGAVGWPDKVPDHISLWGSLLKFRREFDQYVNLRPVRLLPGVPCPLANRKPG 125 Query: 125 DIDFYVVRENTEGEYSSIGGRMYEGTDREIVIQESVFTRHGVDRILKFAYDLAQSRPKKH 184 DIDFYVVRENTEGEY+S+GG+M+EGT+RE V+QESVFTRHGVDRILK+A++LA +RP+K Sbjct: 126 DIDFYVVRENTEGEYTSVGGKMFEGTEREFVLQESVFTRHGVDRILKYAFELANTRPRKK 185 Query: 185 LTSATKSNGIAITMPYWDERVEAMGKNYGDVKTDKYHIDILTAHFVLNPQRFDVVVAPNL 244 LT+ATKSNGIA++MPYWDERV A+ Y D+ DK HIDIL+A FVL P RFDVVVA NL Sbjct: 186 LTAATKSNGIAVSMPYWDERVAAIAAGYPDIAWDKQHIDILSARFVLQPDRFDVVVASNL 245 Query: 245 FGDILSDLGPACAGTIGIAPTANLNPDRKLPSLFEPVHGSAPDIAGKNIANPVATIWSGA 304 FGDILSDLGPAC GTIG+A +ANLNP+R PSLFEPVHGSAPDI GKNIANP+A IWSGA Sbjct: 246 FGDILSDLGPACTGTIGLAASANLNPERTFPSLFEPVHGSAPDIFGKNIANPIAMIWSGA 305 Query: 305 MMLDFLGNGNPKYKQAHDAILAAIETVLVAGPKTPDLGGSGDTTSVGKAIAAAI 358 MMLDFLG+G+ ++K AHDAI+ AIETVLV+GP+TPD+GG+ DTT+VGKA+AAA+ Sbjct: 306 MMLDFLGDGDARFKDAHDAIMRAIETVLVSGPRTPDMGGTADTTAVGKAVAAAL 359