BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0143.p (153 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001100205.1| putative Type I secretion membrane fusion pr... 255 2e-66 ref|YP_003775222.1| Type I antifreeze protein:HlyD family secret... 254 2e-66 ref|YP_001353078.1| HlyD family secretion protein [Janthinobacte... 250 5e-65 ref|YP_003051756.1| HlyD family type I secretion membrane fusion... 188 2e-46 ref|YP_004040398.1| HlyD family type I secretion membrane fusion... 188 2e-46 >ref|YP_001100205.1| putative Type I secretion membrane fusion protein, HlyD [Herminiimonas arsenicoxydans] emb|CAL62081.1| Putative type I secretion membrane fusion protein, HlyD [Herminiimonas arsenicoxydans] Length = 456 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 119/157 (75%), Positives = 139/157 (88%), Gaps = 4/157 (2%) Query: 1 VSRSEVRAPMDGIVNRVLINTVGGVVKPGDAIIEMTPTDDKLVIEAKVAPTDRAQLMTGA 60 V RSEV+APMDG+VNR+ +NTVGGVVKPGD I+EMTP DDK+V+EA + PTDRA+L G Sbjct: 300 VLRSEVKAPMDGVVNRIFVNTVGGVVKPGDPILEMTPIDDKVVVEANINPTDRAELAIGK 359 Query: 61 PARVKVSAYDYGVYGAMKGVVTEVSADTVPEERGERYYRVKIEVTRDPK----LDTGLPL 116 PARVKV+AYDYGV+G+M+G VTE+SADTVPEERGER+YRVKIEVTRDP+ GLPL Sbjct: 360 PARVKVTAYDYGVFGSMQGRVTEISADTVPEERGERHYRVKIEVTRDPEQIKSAGNGLPL 419 Query: 117 MPGMTATADMIVGRRTVWQYLMSPLSRFGQTALREPR 153 MPGMTATAD++VGRRTVWQYLMSP++RF QTALREPR Sbjct: 420 MPGMTATADIVVGRRTVWQYLMSPINRFTQTALREPR 456 >ref|YP_003775222.1| Type I antifreeze protein:HlyD family secretion protein [Herbaspirillum seropedicae SmR1] gb|ADJ63314.1| Type I antifreeze protein:HlyD family secretion protein [Herbaspirillum seropedicae SmR1] Length = 457 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 124/157 (78%), Positives = 142/157 (90%), Gaps = 4/157 (2%) Query: 1 VSRSEVRAPMDGIVNRVLINTVGGVVKPGDAIIEMTPTDDKLVIEAKVAPTDRAQLMTGA 60 VSRSEV+APMDG+VNRV+INT+GGVV+PGD IIEMTP+DDKLVIEA+++PTDRA+L+TGA Sbjct: 301 VSRSEVKAPMDGVVNRVMINTIGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELVTGA 360 Query: 61 PARVKVSAYDYGVYGAMKGVVTEVSADTVPEE---RGERYYRVKIEVTR-DPKLDTGLPL 116 ARVKVSAYDYGVYGAM GVVTE+SADTVP+E RGER+YR+KIEV R +L L L Sbjct: 361 RARVKVSAYDYGVYGAMDGVVTEISADTVPDEGSPRGERFYRLKIEVKRGHDELQQKLAL 420 Query: 117 MPGMTATADMIVGRRTVWQYLMSPLSRFGQTALREPR 153 MPGMTA+AD+IVGRRTVWQYLMSPLSRFGQ ALREPR Sbjct: 421 MPGMTASADIIVGRRTVWQYLMSPLSRFGQGALREPR 457 >ref|YP_001353078.1| HlyD family secretion protein [Janthinobacterium sp. Marseille] gb|ABR90740.1| HlyD family secretion protein, type I secretion pathway [Janthinobacterium sp. Marseille] Length = 457 Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 116/157 (73%), Positives = 138/157 (87%), Gaps = 4/157 (2%) Query: 1 VSRSEVRAPMDGIVNRVLINTVGGVVKPGDAIIEMTPTDDKLVIEAKVAPTDRAQLMTGA 60 V RSEV+APMDG+VNR+ +NTVGGVVKPGD I+EMTP DDK+V+EA + PTDRA+L G Sbjct: 301 VLRSEVKAPMDGVVNRIFVNTVGGVVKPGDPILEMTPIDDKVVVEANINPTDRAELAIGK 360 Query: 61 PARVKVSAYDYGVYGAMKGVVTEVSADTVPEERGERYYRVKIEVTRDPK----LDTGLPL 116 PARVKV+AYDYGV+G+M+G VTE+SADTVPEE+GER+YRVKIEVTRDP+ LPL Sbjct: 361 PARVKVTAYDYGVFGSMQGKVTEISADTVPEEKGERHYRVKIEVTRDPEQIKSAGNSLPL 420 Query: 117 MPGMTATADMIVGRRTVWQYLMSPLSRFGQTALREPR 153 MPGMTATAD++VGRRTVWQYLMSP++RF Q+ALREPR Sbjct: 421 MPGMTATADIVVGRRTVWQYLMSPINRFTQSALREPR 457 >ref|YP_003051756.1| HlyD family type I secretion membrane fusion protein [Methylovorus glucosetrophus SIP3-4] gb|ACT51229.1| type I secretion membrane fusion protein, HlyD family [Methylovorus glucosetrophus SIP3-4] Length = 439 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 84/153 (54%), Positives = 121/153 (79%) Query: 1 VSRSEVRAPMDGIVNRVLINTVGGVVKPGDAIIEMTPTDDKLVIEAKVAPTDRAQLMTGA 60 V R+E+RAP+ GIVNRV + T+GGV++PGDA++E+TP+D+ +V+EA+V P DRA+L G Sbjct: 287 VERTELRAPVSGIVNRVNVTTIGGVIRPGDAVVEITPSDEHIVVEARVRPADRAELHPGL 346 Query: 61 PARVKVSAYDYGVYGAMKGVVTEVSADTVPEERGERYYRVKIEVTRDPKLDTGLPLMPGM 120 P V++SAYDY +G +G +TEVSADT+P+E+GER+YRV++ + + + G P++PGM Sbjct: 347 PVYVRLSAYDYASFGTTQGRLTEVSADTMPDEKGERFYRVRVGLDGNQRAFAGRPIVPGM 406 Query: 121 TATADMIVGRRTVWQYLMSPLSRFGQTALREPR 153 ATAD++VG RTV YL+SPL+RF + AL EPR Sbjct: 407 VATADIVVGSRTVLAYLISPLTRFARAALSEPR 439 >ref|YP_004040398.1| HlyD family type I secretion membrane fusion protein [Methylovorus sp. MP688] gb|ADQ85162.1| type I secretion membrane fusion protein, HlyD family [Methylovorus sp. MP688] Length = 439 Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 84/153 (54%), Positives = 121/153 (79%) Query: 1 VSRSEVRAPMDGIVNRVLINTVGGVVKPGDAIIEMTPTDDKLVIEAKVAPTDRAQLMTGA 60 V R+E+RAP+ GIVNRV + T+GGV++PGDA++E+TP+D+ +V+EA+V P DRA+L G Sbjct: 287 VERTELRAPVSGIVNRVNVTTIGGVIRPGDAVVEITPSDEHIVVEARVRPADRAELHPGL 346 Query: 61 PARVKVSAYDYGVYGAMKGVVTEVSADTVPEERGERYYRVKIEVTRDPKLDTGLPLMPGM 120 P V++SAYDY +G +G +TEVSADT+P+E+GER+YRV++ + + + G P++PGM Sbjct: 347 PVYVRLSAYDYASFGTTQGRLTEVSADTMPDEKGERFYRVRVGLDGNQRAFAGRPIVPGM 406 Query: 121 TATADMIVGRRTVWQYLMSPLSRFGQTALREPR 153 ATAD++VG RTV YL+SPL+RF + AL EPR Sbjct: 407 VATADIVVGSRTVLAYLISPLTRFARAALSEPR 439