BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0141.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775222.1| Type I antifreeze protein:HlyD family secret...   110   6e-23
ref|YP_001100205.1| putative Type I secretion membrane fusion pr...    99   2e-19
ref|YP_001353078.1| HlyD family secretion protein [Janthinobacte...    97   9e-19
ref|ZP_07660184.1| HlyD family secretion protein [Roseibium sp. ...    76   2e-12
ref|YP_546543.1| Type I secretion membrane fusion protein, HlyD ...    74   1e-11

>ref|YP_003775222.1| Type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ63314.1| Type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
          Length = 457

 Score =  110 bits (276), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 70/90 (77%)

Query: 18  AHSRRLMRLIAPHLDRQLGDHGELARPRQFILVTVFLLLCLLVWSWFAQIDMVVRGAGRI 77
           A  +  MR +AP LDR+LG+   + RPR  +L    LL  L++WS FA IDMVVRG+GRI
Sbjct: 15  ARGQGFMRRLAPRLDRRLGELATMPRPRLAVLAVTVLLALLVLWSVFAPIDMVVRGSGRI 74

Query: 78  VASEHNQIIQHLEGGIVSAILVREGAAVKK 107
           VASEHNQ+IQHLEGGIVSAILVREGAAVKK
Sbjct: 75  VASEHNQVIQHLEGGIVSAILVREGAAVKK 104


>ref|YP_001100205.1| putative Type I secretion membrane fusion protein, HlyD
           [Herminiimonas arsenicoxydans]
 emb|CAL62081.1| Putative type I secretion membrane fusion protein, HlyD
           [Herminiimonas arsenicoxydans]
          Length = 456

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 64/83 (77%)

Query: 25  RLIAPHLDRQLGDHGELARPRQFILVTVFLLLCLLVWSWFAQIDMVVRGAGRIVASEHNQ 84
           R   P LDR +  + E+  P+ F+L  +  LL L++W++FA IDMVVRG GRIV S+HNQ
Sbjct: 22  RKAVPVLDRGIESYREMPGPKLFVLALLIGLLLLVIWAYFAPIDMVVRGQGRIVPSDHNQ 81

Query: 85  IIQHLEGGIVSAILVREGAAVKK 107
           IIQHLEGGIVSAI+VREGAAV+K
Sbjct: 82  IIQHLEGGIVSAIVVREGAAVRK 104


>ref|YP_001353078.1| HlyD family secretion protein [Janthinobacterium sp. Marseille]
 gb|ABR90740.1| HlyD family secretion protein, type I secretion pathway
           [Janthinobacterium sp. Marseille]
          Length = 457

 Score = 97.1 bits (240), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 63/83 (75%)

Query: 25  RLIAPHLDRQLGDHGELARPRQFILVTVFLLLCLLVWSWFAQIDMVVRGAGRIVASEHNQ 84
           R   P LDR +  + E+  P+ F+L  +  LL L++W++ A IDMVVRG GRIV S+HNQ
Sbjct: 23  RKAVPALDRGIDAYREMPGPKVFVLALLAGLLLLVIWAYLAPIDMVVRGQGRIVPSDHNQ 82

Query: 85  IIQHLEGGIVSAILVREGAAVKK 107
           IIQHLEGGIVSAI+VREGAAV+K
Sbjct: 83  IIQHLEGGIVSAIVVREGAAVRK 105


>ref|ZP_07660184.1| HlyD family secretion protein [Roseibium sp. TrichSKD4]
 gb|EFO31283.1| HlyD family secretion protein [Roseibium sp. TrichSKD4]
          Length = 193

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 43/61 (70%)

Query: 47  FILVTVFLLLCLLVWSWFAQIDMVVRGAGRIVASEHNQIIQHLEGGIVSAILVREGAAVK 106
           F+++    L+ +  W+ F QID+V RG+GR+V S  NQ +QHLEGGI+  ILVREG  VK
Sbjct: 14  FVVIVALGLIAVFAWAQFTQIDIVTRGSGRVVPSLQNQFVQHLEGGIIREILVREGQFVK 73

Query: 107 K 107
           K
Sbjct: 74  K 74


>ref|YP_546543.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
 gb|ABE50702.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
          Length = 428

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 45/62 (72%)

Query: 45  RQFILVTVFLLLCLLVWSWFAQIDMVVRGAGRIVASEHNQIIQHLEGGIVSAILVREGAA 104
           R F+L++VF +  L+ W+  AQ+D++VR  GR+V +   QI+QHLEGGIV  +LV+EG  
Sbjct: 15  RAFVLISVFAVAALITWAALAQVDLIVRTVGRVVPAGKAQIVQHLEGGIVRTLLVQEGEI 74

Query: 105 VK 106
           VK
Sbjct: 75  VK 76