BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0135.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352384.1| hypothetical protein mma_0694 [Janthinobacte... 272 1e-71 ref|YP_004751546.1| hypothetical protein CFU_0890 [Collimonas fu... 249 1e-64 ref|YP_003775218.1| hypothetical protein Hsero_1800 [Herbaspiril... 249 1e-64 ref|ZP_05839348.1| conserved hypothetical protein [Brucella suis... 107 4e-22 ref|YP_002733486.1| hypothetical protein BMEA_A1859 [Brucella me... 107 6e-22 >ref|YP_001352384.1| hypothetical protein mma_0694 [Janthinobacterium sp. Marseille] gb|ABR90745.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 168 Score = 272 bits (695), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 131/168 (77%), Positives = 150/168 (89%), Gaps = 1/168 (0%) Query: 1 MEFNFINPRKNALVYLIKILSGSLILWYGLRACGLPEPYWAMISLIIVTEPDMTVAKANF 60 MEFNFI PRKNALVY+IKILSGSLILWYGLRA GL EPYWAMISLIIVTEPDMTVAKANF Sbjct: 1 MEFNFITPRKNALVYIIKILSGSLILWYGLRALGLQEPYWAMISLIIVTEPDMTVAKANF 60 Query: 61 RARLINTISGAIIACLCLVIFGATFLSMLIALTSAVLVAMLWQNYPSNWRLGPATVVILM 120 +ARL+NTISG +IACL L++FG +F +MLIA+T AV+VAMLWQNYPSNWRLGP TVVILM Sbjct: 61 KARLVNTISGCVIACLSLLLFGTSFFAMLIAMTLAVIVAMLWQNYPSNWRLGPVTVVILM 120 Query: 121 SAAFAGGGLHEELHLALLRVSEVIAGSTVALLQTVVYIGFVNRLRHGD 168 SAAF+G G++EELHLA LRVSEV+AGS VALLQTV+Y+ + + + D Sbjct: 121 SAAFSGAGVNEELHLAFLRVSEVMAGSIVALLQTVIYMQ-IQKWQQSD 167 >ref|YP_004751546.1| hypothetical protein CFU_0890 [Collimonas fungivorans Ter331] gb|AEK60723.1| Conserved domain protein [Collimonas fungivorans Ter331] Length = 169 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 123/164 (75%), Positives = 143/164 (87%) Query: 1 MEFNFINPRKNALVYLIKILSGSLILWYGLRACGLPEPYWAMISLIIVTEPDMTVAKANF 60 M+F FI+PRKNALVYLIKIL+G+LI WYGLRA GL EPYWAMISLIIVTEPD+ +AKANF Sbjct: 1 MDFQFISPRKNALVYLIKILTGALITWYGLRALGLQEPYWAMISLIIVTEPDVNLAKANF 60 Query: 61 RARLINTISGAIIACLCLVIFGATFLSMLIALTSAVLVAMLWQNYPSNWRLGPATVVILM 120 RARLINT++G ++ACL LV+FG FLS+L+AL ++VLVAML QNYP+NWRLGPATVVILM Sbjct: 61 RARLINTLNGCVVACLALVLFGPGFLSLLVALATSVLVAMLLQNYPANWRLGPATVVILM 120 Query: 121 SAAFAGGGLHEELHLALLRVSEVIAGSTVALLQTVVYIGFVNRL 164 SAA G GLH+EL ALLRV EVIAGSTVALLQ++VY + RL Sbjct: 121 SAAIGGKGLHQELEYALLRVGEVIAGSTVALLQSLVYSYALKRL 164 >ref|YP_003775218.1| hypothetical protein Hsero_1800 [Herbaspirillum seropedicae SmR1] gb|ADJ63310.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 174 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 135/168 (80%), Positives = 149/168 (88%) Query: 1 MEFNFINPRKNALVYLIKILSGSLILWYGLRACGLPEPYWAMISLIIVTEPDMTVAKANF 60 ME +FINPRKNALVYLIKILSG LILWYGLRA G+ EPYWAMISLIIVTEPDMTVAKANF Sbjct: 1 MELHFINPRKNALVYLIKILSGCLILWYGLRAVGIAEPYWAMISLIIVTEPDMTVAKANF 60 Query: 61 RARLINTISGAIIACLCLVIFGATFLSMLIALTSAVLVAMLWQNYPSNWRLGPATVVILM 120 RARLINT+SG I++C+ LV+FG TFL+ML ALT+AV+VAML QNYPSNWRLGPATVVIL+ Sbjct: 61 RARLINTLSGCIVSCIALVLFGPTFLAMLAALTAAVVVAMLLQNYPSNWRLGPATVVILL 120 Query: 121 SAAFAGGGLHEELHLALLRVSEVIAGSTVALLQTVVYIGFVNRLRHGD 168 SAAF+G GL+EELHLAL+RV EVI GSTVALLQTVVYI V R D Sbjct: 121 SAAFSGQGLNEELHLALMRVGEVIVGSTVALLQTVVYIWLVKRKEADD 168 >ref|ZP_05839348.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gb|EEW89346.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] Length = 176 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 4 NFINPRKNALVYLIKILSGSLILWYGLRACGLPEPYWAMISLIIVTEPDMTVAKANFRAR 63 +F NP K AL Y + G LI W+ LR G+ P W+M+++ IV++PD+ + R R Sbjct: 5 HFSNPEK-ALHYASQTFIGCLISWFALRGIGIEHPIWSMMTVFIVSDPDIHTTLSLARVR 63 Query: 64 LINTISGAIIACLCLVIFGATFLSMLIALTSAVLVAMLWQNYPSNWRLGPATVVILMSAA 123 INT G I + + + G + + L A V V ++ NYPSNWRL PATVVI+M A Sbjct: 64 AINTAVGCTIGMVMIWLVGYSPVISLFAAAITVGVVVMIDNYPSNWRLAPATVVIIMDAG 123 Query: 124 FAGGGLHEELHLALLRVSEVIAGSTVALLQTVVY----IGFVNRLRHGD 168 A +EL LAL R E+ G VAL +Y + RLRHG Sbjct: 124 SAAQTSDQELWLALSRFLEITLGCVVALSVAWIYSRAIMTIRKRLRHGK 172 >ref|YP_002733486.1| hypothetical protein BMEA_A1859 [Brucella melitensis ATCC 23457] ref|ZP_05465791.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gb|ACO01532.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gb|EEZ17320.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] Length = 176 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 5/169 (2%) Query: 4 NFINPRKNALVYLIKILSGSLILWYGLRACGLPEPYWAMISLIIVTEPDMTVAKANFRAR 63 +F NP K AL Y + G LI W+ LR G+ P W+M+++ IV++PD+ + R R Sbjct: 5 HFSNPGK-ALHYASQTFIGCLISWFALRGIGIEHPIWSMMTVFIVSDPDIHTTLSLARVR 63 Query: 64 LINTISGAIIACLCLVIFGATFLSMLIALTSAVLVAMLWQNYPSNWRLGPATVVILMSAA 123 INT G I + + + G + + L A V V ++ NYPSNWRL PATVVI+M A Sbjct: 64 AINTAVGCTIGMVMIWLVGDSPVISLFAAAITVGVVVMIDNYPSNWRLAPATVVIIMDAG 123 Query: 124 FAGGGLHEELHLALLRVSEVIAGSTVALLQTVVY----IGFVNRLRHGD 168 A +EL LAL R E+ G VAL +Y + RLRHG Sbjct: 124 SAAQTSDQELWLALSRFLEITLGCVVALSVAWIYSRAIMTIRKRLRHGK 172