BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0128.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775211.1| spermidine synthase [Herbaspirillum seropedi... 436 e-120 ref|YP_004753214.1| putative Spermidine synthase [Collimonas fun... 432 e-119 ref|YP_001352379.1| hypothetical protein mma_0689 [Janthinobacte... 424 e-117 ref|YP_001099081.1| putative spermidine synthase [Herminiimonas ... 412 e-113 ref|ZP_08274499.1| putative Spermidine synthase [Oxalobacteracea... 402 e-110 >ref|YP_003775211.1| spermidine synthase [Herbaspirillum seropedicae SmR1] gb|ADJ63303.1| spermidine synthase protein [Herbaspirillum seropedicae SmR1] Length = 275 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 208/278 (74%), Positives = 233/278 (83%), Gaps = 6/278 (2%) Query: 1 MLIKRKSIEAQANTKAGPGPDKDKANSKAKPRSKVTAPRKPRFAPVTLSEQDGVRYLHFG 60 MLI+RKSIEAQANTKAGP + + + A + PRK ++APVTLSE +GVRYLHFG Sbjct: 1 MLIRRKSIEAQANTKAGPNRRRQQLEADA------SKPRKIKYAPVTLSELEGVRYLHFG 54 Query: 61 TEWVQGAMRIRKPDWIELEYAQQMMSWMLFNQAPQHIVQLGLGTAALTKFSYRQFPKANV 120 TEWVQGAMRIRKPDWIELEYAQQMM+WMLFN+ P+HIVQLGLGT ALTKFSYRQFP+A V Sbjct: 55 TEWVQGAMRIRKPDWIELEYAQQMMAWMLFNRDPRHIVQLGLGTGALTKFSYRQFPQAQV 114 Query: 121 TAVELNPSVIAICHSMFKLPPEDDRLSLLEMDANDFIHDEQRHGTIDALQVDLYDATARG 180 TAVELNP+VI ICHSMFKLP D+RL +LE DA DFI HG IDALQVDLYDATARG Sbjct: 115 TAVELNPAVITICHSMFKLPEPDERLMILESDAMDFIVHAASHGIIDALQVDLYDATARG 174 Query: 181 PMLDTPEFYKACRDSLSEDGVMTVNLFGDHPSYAKNLKAMRYAFDQVISLPEVHDGNVVA 240 P+LDTPEFY+AC DSL+ GVMTVNLFGDHPSYAKNL+AM +AFD V+SLPEVHDGNVVA Sbjct: 175 PVLDTPEFYQACYDSLAAGGVMTVNLFGDHPSYAKNLRAMEHAFDTVVSLPEVHDGNVVA 234 Query: 241 IGFRNAVEFDFPALYERAEEIKAATKLPAKSWVNGIKS 278 + F+ V+FDFP LY RA I+ TKLPAKSWVNGIKS Sbjct: 235 LAFKGEVQFDFPELYARAALIETQTKLPAKSWVNGIKS 272 >ref|YP_004753214.1| putative Spermidine synthase [Collimonas fungivorans Ter331] gb|AEK62391.1| putative Spermidine synthase [Collimonas fungivorans Ter331] Length = 278 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 209/278 (75%), Positives = 231/278 (83%), Gaps = 5/278 (1%) Query: 1 MLIKRKSIEAQANTKAGPGPDKDKANSKAKPRSKVTAPRKPRFAPVTLSEQDGVRYLHFG 60 MLIKRKSIEA AN GP + S+ + PRKP+FAPVTLSEQDGVR+LHFG Sbjct: 1 MLIKRKSIEADANRMDGP-----RKRSEVAKKDTPKPPRKPKFAPVTLSEQDGVRFLHFG 55 Query: 61 TEWVQGAMRIRKPDWIELEYAQQMMSWMLFNQAPQHIVQLGLGTAALTKFSYRQFPKANV 120 TEWVQGAMR+RKPDW ELEYAQQMM+WMLFN PQHIVQLGLGTAALTKFSYRQFP A V Sbjct: 56 TEWVQGAMRLRKPDWPELEYAQQMMAWMLFNPEPQHIVQLGLGTAALTKFSYRQFPAARV 115 Query: 121 TAVELNPSVIAICHSMFKLPPEDDRLSLLEMDANDFIHDEQRHGTIDALQVDLYDATARG 180 TAVELNPSV+AIC SMFKLPP+D+RLS+LEMDA DF+ D HG+IDALQVDLYDATARG Sbjct: 116 TAVELNPSVLAICCSMFKLPPDDERLSVLEMDAMDFVMDPLNHGSIDALQVDLYDATARG 175 Query: 181 PMLDTPEFYKACRDSLSEDGVMTVNLFGDHPSYAKNLKAMRYAFDQVISLPEVHDGNVVA 240 P+LDTPEFY AC L +DG+MTVNLFGDHPSYAKNLKAM +AFD V LPEVH+GNV+A Sbjct: 176 PVLDTPEFYSACAACLKDDGIMTVNLFGDHPSYAKNLKAMMFAFDDVWCLPEVHEGNVIA 235 Query: 241 IGFRNAVEFDFPALYERAEEIKAATKLPAKSWVNGIKS 278 I F+ A DF ALYERA EI AATKLPAKSWVNG+K+ Sbjct: 236 IAFKKAPPADFSALYERAAEITAATKLPAKSWVNGLKT 273 >ref|YP_001352379.1| hypothetical protein mma_0689 [Janthinobacterium sp. Marseille] gb|ABR90700.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 276 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 201/278 (72%), Positives = 231/278 (83%), Gaps = 7/278 (2%) Query: 1 MLIKRKSIEAQANTKAGPGPDKDKANSKAKPRSKVTAPRKPRFAPVTLSEQDGVRYLHFG 60 MLIKRKSIEA AN K+GPG K+ P +K RK +FAPVTLSEQ G+RYLHFG Sbjct: 1 MLIKRKSIEADANLKSGPG-------KKSPPVAKAKPVRKVKFAPVTLSEQFGIRYLHFG 53 Query: 61 TEWVQGAMRIRKPDWIELEYAQQMMSWMLFNQAPQHIVQLGLGTAALTKFSYRQFPKANV 120 TEWVQGAMRI KPDWIELEYAQQMM+WMLFN+ PQHIVQLGLGT ALTKFSY++FP+A V Sbjct: 54 TEWVQGAMRISKPDWIELEYAQQMMAWMLFNEKPQHIVQLGLGTGALTKFSYKRFPEARV 113 Query: 121 TAVELNPSVIAICHSMFKLPPEDDRLSLLEMDANDFIHDEQRHGTIDALQVDLYDATARG 180 TAV+LNPSVI IC SMFKLPP D+RL+++EMDA ++++D G IDALQVDLYDATARG Sbjct: 114 TAVDLNPSVITICASMFKLPPNDERLTVIEMDALEYVNDPANLGRIDALQVDLYDATARG 173 Query: 181 PMLDTPEFYKACRDSLSEDGVMTVNLFGDHPSYAKNLKAMRYAFDQVISLPEVHDGNVVA 240 P+LDTPEFY+AC L+ DG+MTVNLFGDHPSYA+NL AM YAFD VISLPEVH+GNV+A Sbjct: 174 PVLDTPEFYQACAACLTPDGIMTVNLFGDHPSYARNLSAMHYAFDTVISLPEVHEGNVIA 233 Query: 241 IGFRNAVEFDFPALYERAEEIKAATKLPAKSWVNGIKS 278 I F + E D ALY+RA +I AATKLPAKSWVNGIK+ Sbjct: 234 IAFNSTPELDIAALYDRAAQITAATKLPAKSWVNGIKA 271 >ref|YP_001099081.1| putative spermidine synthase [Herminiimonas arsenicoxydans] emb|CAL60954.1| Conserved hypothetical protein, putative spermidine synthase [Herminiimonas arsenicoxydans] Length = 276 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/278 (71%), Positives = 226/278 (81%), Gaps = 7/278 (2%) Query: 1 MLIKRKSIEAQANTKAGPGPDKDKANSKAKPRSKVTAPRKPRFAPVTLSEQDGVRYLHFG 60 MLIKRKSIEA AN K+GPG K A +K KP RK +FAPVTLSEQ GVRYLHFG Sbjct: 1 MLIKRKSIEADANLKSGPG-KKSIAPAKPKPA------RKVKFAPVTLSEQFGVRYLHFG 53 Query: 61 TEWVQGAMRIRKPDWIELEYAQQMMSWMLFNQAPQHIVQLGLGTAALTKFSYRQFPKANV 120 TEWVQGAMRI KPDWIELEYAQQMM+WMLFN PQHIVQLGLGT ALTKFSY+ F +A V Sbjct: 54 TEWVQGAMRISKPDWIELEYAQQMMAWMLFNDKPQHIVQLGLGTGALTKFSYKWFREAQV 113 Query: 121 TAVELNPSVIAICHSMFKLPPEDDRLSLLEMDANDFIHDEQRHGTIDALQVDLYDATARG 180 TAV+LNPSVI IC +MFKLPP D+RL+++EMDA ++++D G IDALQVD+YDATARG Sbjct: 114 TAVDLNPSVITICETMFKLPPNDERLNVIEMDALEYVNDPANLGRIDALQVDVYDATARG 173 Query: 181 PMLDTPEFYKACRDSLSEDGVMTVNLFGDHPSYAKNLKAMRYAFDQVISLPEVHDGNVVA 240 P+LDTPEFY++C L+ DG+MTVNLFGDHPSYA+NL AM +AFD VISLPEVHDGNV+A Sbjct: 174 PVLDTPEFYQSCAACLTPDGIMTVNLFGDHPSYARNLSAMHFAFDTVISLPEVHDGNVIA 233 Query: 241 IGFRNAVEFDFPALYERAEEIKAATKLPAKSWVNGIKS 278 I F D ALYERA +I A TKLPAKSWVNGIK+ Sbjct: 234 IAFNTTPTLDIAALYERAAQITATTKLPAKSWVNGIKA 271 >ref|ZP_08274499.1| putative Spermidine synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32033.1| putative Spermidine synthase [Oxalobacteraceae bacterium IMCC9480] Length = 275 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/277 (69%), Positives = 221/277 (79%), Gaps = 7/277 (2%) Query: 1 MLIKRKSIEAQANTKAGPGPDKDKANSKAKPRSKVTAPRKPRFAPVTLSEQDGVRYLHFG 60 MLIKRKSIEAQAN GPG S P SK PRK ++APVTLSEQDGVR+LHFG Sbjct: 1 MLIKRKSIEAQANHMVGPG-----RKSPVAPVSK--PPRKIKYAPVTLSEQDGVRFLHFG 53 Query: 61 TEWVQGAMRIRKPDWIELEYAQQMMSWMLFNQAPQHIVQLGLGTAALTKFSYRQFPKANV 120 TEWVQGAMR+RKPDWIELEYAQQMM WMLF P+H+VQLGLGT ALTKF YR F +A V Sbjct: 54 TEWVQGAMRLRKPDWIELEYAQQMMGWMLFIDNPEHVVQLGLGTGALTKFCYRTFAEARV 113 Query: 121 TAVELNPSVIAICHSMFKLPPEDDRLSLLEMDANDFIHDEQRHGTIDALQVDLYDATARG 180 TAVELNPSVI IC +MFK+PPEDDRL +LEMDANDF++D +IDA+QVDLYDATA+G Sbjct: 114 TAVELNPSVITICETMFKMPPEDDRLRVLEMDANDFVNDPANLDSIDAMQVDLYDATAKG 173 Query: 181 PMLDTPEFYKACRDSLSEDGVMTVNLFGDHPSYAKNLKAMRYAFDQVISLPEVHDGNVVA 240 P+L++ EFY++C L DG+MTVNLFGDHPS+ +NLKAMR+AFD VI LPEVH+GNVVA Sbjct: 174 PVLESAEFYQSCAACLRADGIMTVNLFGDHPSFNRNLKAMRFAFDDVICLPEVHEGNVVA 233 Query: 241 IGFRNAVEFDFPALYERAEEIKAATKLPAKSWVNGIK 277 + FR + DF LY RA + A TKLPAKSWVNGIK Sbjct: 234 LAFRRRRQIDFADLYARAANVVARTKLPAKSWVNGIK 270