BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0126.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777940.1| hypothetical protein Hsero_4566 [Herbaspiril...   153   1e-35

>ref|YP_003777940.1| hypothetical protein Hsero_4566 [Herbaspirillum seropedicae SmR1]
 gb|ADJ66032.1| hypothetical protein Hsero_4566 [Herbaspirillum seropedicae SmR1]
          Length = 143

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/142 (53%), Positives = 98/142 (69%), Gaps = 2/142 (1%)

Query: 3   QYGSTHRGKHFIVIDSIQPGKKGVFCSIKVDGEEEYPNIKGSPFDTVHAAQMAGAAFARA 62
            YG+T+RGK  I ++SI+     V C + +D +E  P+++G+PF ++ AAQ+    +ARA
Sbjct: 4   HYGATYRGKQ-ISVESIEQRNGDVLCKVSID-DEPAPHLRGNPFSSLAAAQVTAVGYARA 61

Query: 63  LIDSELDLDSYEHKGYFIRASGSEQRDGTWVGAYQLHRNDNPVPFRRANVTPFRGNTRKE 122
           +ID+ LD D  EH GYFIR S +EQ DGTWVG YQLHRNDNPV FRR     FRGNT  E
Sbjct: 62  VIDTLLDNDVAEHHGYFIRVSSTEQIDGTWVGNYQLHRNDNPVAFRRVVCEDFRGNTSVE 121

Query: 123 AEDNAVAMAREAIDEDVAAGKL 144
           AE  A+A A  A+D D+AAGKL
Sbjct: 122 AEQYAMATAFVAVDADIAAGKL 143