BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0083.p (532 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775277.1| major facilitator superfamily permease [Herb... 871 0.0 ref|YP_001894286.1| EmrB/QacA subfamily drug resistance transpor... 743 0.0 ref|YP_004226870.1| major facilitator superfamily protein [Burkh... 737 0.0 ref|YP_003905651.1| major facilitator superfamily protein [Burkh... 728 0.0 ref|ZP_02882622.1| drug resistance transporter, EmrB/QacA subfam... 725 0.0 >ref|YP_003775277.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63369.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 532 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/532 (81%), Positives = 491/532 (92%) Query: 1 MSPYKEAAHSSGQVLPFRESLMATLGICFVIMLVALDQTIVGTALPTIVAELKGFDLYAW 60 M+ + ++AHSSGQVLPFRESL+ATLGICFVIMLVALDQTIVGTALPTIVAELKGF+LYAW Sbjct: 1 MALHTDSAHSSGQVLPFRESLLATLGICFVIMLVALDQTIVGTALPTIVAELKGFELYAW 60 Query: 61 VATSYLLTSVITVPIFGRLGDYFGRKPFLIASIIIFVIASMLCGMADSMLFLVLARGLQG 120 VAT+YLLTSVITVPIFGRLGDYFGRKPF+IASII+FV AS LCGMA+SMLFLVLARGLQG Sbjct: 61 VATAYLLTSVITVPIFGRLGDYFGRKPFVIASIIVFVGASALCGMANSMLFLVLARGLQG 120 Query: 121 IGGGMLVGTAFASAADLFPDPHIRLRWQIILSAAYGIATSVGPSLGGFLTQSLGWRWTFY 180 IGGGMLVGT FAS ADLFPDP +RLRWQIILS ++GIAT+VGPSLGGFLTQ LGWRW FY Sbjct: 121 IGGGMLVGTCFASVADLFPDPRVRLRWQIILSVSFGIATAVGPSLGGFLTQGLGWRWVFY 180 Query: 181 VNLPVGLVSLFFAMRYIPHIRHHKNAGKVRLDWLGALLISVALGSLQLLVELFPKRGLTG 240 NLP+G++SLFF R++PHIRH ++AGK+RLDW GALLIS++LGSLQLLVEL PKRG+T Sbjct: 181 CNLPIGVISLFFVWRFVPHIRHMQHAGKMRLDWPGALLISLSLGSLQLLVELLPKRGVTS 240 Query: 241 GMLALLVVAIGAFYALWKWERQVEQPILPFEMFKDPALSSLFLLSVLAGFSMFSMLMYAP 300 GML LL V++ AFYALWKWE++ QPILPFEM +D AL+SLFLLSVLAGF+MFSMLMYAP Sbjct: 241 GMLVLLAVSVAAFYALWKWEQRAAQPILPFEMLRDRALASLFLLSVLAGFAMFSMLMYAP 300 Query: 301 LLFQGGFGMSPREAGLLITPLVACITVASIVNGRIVTRIPNPNMMMYVGFVLIALSCLGI 360 LLFQGGFG+SPREAGLLITPLVACITVASIVNGRI+TRIPNPN+MM +GF LIA SCLGI Sbjct: 301 LLFQGGFGLSPREAGLLITPLVACITVASIVNGRIITRIPNPNLMMNLGFALIAASCLGI 360 Query: 361 VLSQRNTPTGFMLATMLAGGFGLGLVLPNLTVFAQQAASREHLGIATALLQSLRMIGGML 420 VL R T GF+LA MLAGGFGLGLVLPNLTVFAQQAA+REHLGIATALLQSLRMIGGML Sbjct: 361 VLCDRVTGKGFLLAVMLAGGFGLGLVLPNLTVFAQQAAAREHLGIATALLQSLRMIGGML 420 Query: 421 GTAVTGTLVTQMYGSGVERALESDHAAQWLAEFKDPEILVNHDIQSTLLAQMLQAGHNGS 480 GTA+TGTLV+QMYG+GVE+ALE DHAAQWL +F DPE+LVNHDIQS LLAQ++QAGH+GS Sbjct: 421 GTAITGTLVSQMYGAGVEKALEGDHAAQWLKDFSDPEVLVNHDIQSVLLAQLMQAGHDGS 480 Query: 481 ALLDAARDALVGAIHMGIALAVVSALIGLWMVRRVPLIRFTPNEKVETVLSE 532 ALL+AAR+ALVGAIHMGIA+A+V+AL+GLWMVRRVP IRF ++KVE V+SE Sbjct: 481 ALLEAAREALVGAIHMGIAIAIVAALVGLWMVRRVPPIRFDQDKKVEPVMSE 532 >ref|YP_001894286.1| EmrB/QacA subfamily drug resistance transporter [Burkholderia phytofirmans PsJN] gb|ACD15062.1| drug resistance transporter, EmrB/QacA subfamily [Burkholderia phytofirmans PsJN] Length = 531 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/530 (67%), Positives = 445/530 (83%), Gaps = 2/530 (0%) Query: 1 MSPYKEAAHSSGQVLPFRESLMATLGICFVIMLVALDQTIVGTALPTIVAELKGFDLYAW 60 M+ + A HSSGQVLPFRESL+A LGI FV MLVALDQT+VGTALPTIVAELKGF+LYAW Sbjct: 1 MAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELKGFELYAW 60 Query: 61 VATSYLLTSVITVPIFGRLGDYFGRKPFLIASIIIFVIASMLCGMADSMLFLVLARGLQG 120 VATSYLLTSVITVPIFGRLGDY+GRKPF+IASI++F AS+LCGMA++MLFLVLARGLQG Sbjct: 61 VATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLCGMANNMLFLVLARGLQG 120 Query: 121 IGGGMLVGTAFASAADLFPDPHIRLRWQIILSAAYGIATSVGPSLGGFLTQSLGWRWTFY 180 IGGGMLVGTAFA DLFPD +RLRWQ+++S+A+GIA +VGPSLGGFLTQ GWR FY Sbjct: 121 IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGFLTQYYGWRSVFY 180 Query: 181 VNLPVGLVSLFFAMRYIPHIRHHKNAGKVRLDWLGALLISVALGSLQLLVELFPKRGLTG 240 VNLPVGL+SLFF R++PH+RH ++ GK+RLDW GA+LI+VALGSLQL VEL PK G+T Sbjct: 181 VNLPVGLLSLFFVWRFLPHLRHVEHEGKMRLDWPGAVLIAVALGSLQLFVELLPKHGVTL 240 Query: 241 GMLALLVVAIGAFYALWKWERQVEQPILPFEMFKDPALSSLFLLSVLAGFSMFSMLMYAP 300 G +ALLV+++ + YALW+WE++ ILP +MF++ +L++LF L+VL GFSMFS+L YAP Sbjct: 241 GAIALLVLSVASAYALWQWEKRCPTAILPVDMFRNRSLAALFTLAVLGGFSMFSLLFYAP 300 Query: 301 LLFQGGFGMSPREAGLLITPLVACITVASIVNGRIVTRIPNPNMMMYVGFVLIALSCLGI 360 LLFQGGFGMSP+EAGL+ITPLV IT+ SI NGRIV+R+ NPN+M+Y+GF L+AL+CLG+ Sbjct: 301 LLFQGGFGMSPKEAGLVITPLVVFITIGSIANGRIVSRVRNPNLMLYIGFTLLALACLGV 360 Query: 361 VLSQRNTPTGFMLATMLAGGFGLGLVLPNLTVFAQQAASREHLGIATALLQSLRMIGGML 420 V++ R P +++ M+ GG GLG V+PNLT+FAQQ A REHLGIATALLQSLRMIGGM+ Sbjct: 361 VVATRAMPQWLLMSFMIVGGLGLGFVMPNLTIFAQQTAGREHLGIATALLQSLRMIGGMI 420 Query: 421 GTAVTGTLVTQMYGSGVERALESDHAAQWLAEFKDPEILVNHDIQSTLLAQMLQAGHNGS 480 GTA+TGTLV+ MY SGV AL++DHA+QWLA+ DP+IL+N D Q+TLL Q+ AGHNG+ Sbjct: 421 GTALTGTLVSHMYASGVRSALDNDHASQWLADLGDPQILINRDAQATLLGQLTHAGHNGA 480 Query: 481 ALLDAARDALVGAIHMGIALAVVSALIGLWMVRRVPLIRFTPNEKVETVL 530 LL+ AR+ALV AIH+G+A+A + A + +W RRVP I+ K+E V+ Sbjct: 481 MLLETAREALVSAIHLGLAMAAIIAAVSVWQSRRVPPIKL--QRKLEPVI 528 >ref|YP_004226870.1| major facilitator superfamily protein [Burkholderia sp. CCGE1001] gb|ADX53810.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1001] Length = 531 Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/530 (66%), Positives = 442/530 (83%), Gaps = 2/530 (0%) Query: 1 MSPYKEAAHSSGQVLPFRESLMATLGICFVIMLVALDQTIVGTALPTIVAELKGFDLYAW 60 M+ + A HSSGQVLPFRESL+A LGI FV MLVALDQT+VGTALPTIVAELKGF+LYAW Sbjct: 1 MAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELKGFELYAW 60 Query: 61 VATSYLLTSVITVPIFGRLGDYFGRKPFLIASIIIFVIASMLCGMADSMLFLVLARGLQG 120 VATSYLLTSVITVPIFGRLGDY+GRKPF+IASI++F AS+LCG+A++MLFLVLARGLQG Sbjct: 61 VATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTGASVLCGVANNMLFLVLARGLQG 120 Query: 121 IGGGMLVGTAFASAADLFPDPHIRLRWQIILSAAYGIATSVGPSLGGFLTQSLGWRWTFY 180 IGGGMLVGTAFA DLFPD +RLRWQ+++S+A+GIA +VGPSLGGFLTQ GWR FY Sbjct: 121 IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGFLTQYYGWRSVFY 180 Query: 181 VNLPVGLVSLFFAMRYIPHIRHHKNAGKVRLDWLGALLISVALGSLQLLVELFPKRGLTG 240 VNLPVG++SLFF R++PH+RH ++ GK+RLDW GA LI+VALGSLQL VEL PK GLT Sbjct: 181 VNLPVGILSLFFVWRFLPHLRHVEHKGKMRLDWPGAALIAVALGSLQLFVELLPKHGLTL 240 Query: 241 GMLALLVVAIGAFYALWKWERQVEQPILPFEMFKDPALSSLFLLSVLAGFSMFSMLMYAP 300 G ALLV+++ + YALW+WE++ ILP +MF++ +L++LF L+VL GF+MFS+L YAP Sbjct: 241 GACALLVLSVASAYALWQWEKRCPTAILPVDMFRNQSLAALFTLAVLGGFTMFSLLFYAP 300 Query: 301 LLFQGGFGMSPREAGLLITPLVACITVASIVNGRIVTRIPNPNMMMYVGFVLIALSCLGI 360 LLFQGGFGMSP+EAG++ITPLV IT+ SI NGR+V+R+ NPN+M+YVGF L+ALSCLG+ Sbjct: 301 LLFQGGFGMSPKEAGVVITPLVVFITIGSIANGRVVSRVRNPNLMLYVGFALVALSCLGV 360 Query: 361 VLSQRNTPTGFMLATMLAGGFGLGLVLPNLTVFAQQAASREHLGIATALLQSLRMIGGML 420 V++ R+ P +++ M+ GG GLG V+PNLT+FAQQ A REHLGIATALLQSLRMIGGM+ Sbjct: 361 VVATRSMPHWLLMSFMVLGGLGLGFVMPNLTIFAQQTAGREHLGIATALLQSLRMIGGMI 420 Query: 421 GTAVTGTLVTQMYGSGVERALESDHAAQWLAEFKDPEILVNHDIQSTLLAQMLQAGHNGS 480 GTA+TGTLV+ MY SGV LESDHA+QW + DP+IL+NH+ Q++LL Q+ QAGHNG+ Sbjct: 421 GTALTGTLVSHMYASGVRSTLESDHASQWFGDLGDPQILINHEAQASLLGQLAQAGHNGA 480 Query: 481 ALLDAARDALVGAIHMGIALAVVSALIGLWMVRRVPLIRFTPNEKVETVL 530 LL+ AR+ LV AIH G+A+A + A++ +W RRVP I+ K+E V+ Sbjct: 481 MLLETARETLVAAIHFGLAMAAIVAVVSVWQSRRVPPIKL--QRKLEPVI 528 >ref|YP_003905651.1| major facilitator superfamily protein [Burkholderia sp. CCGE1003] gb|ADN56360.1| major facilitator superfamily MFS_1 [Burkholderia sp. CCGE1003] Length = 531 Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/530 (65%), Positives = 439/530 (82%), Gaps = 2/530 (0%) Query: 1 MSPYKEAAHSSGQVLPFRESLMATLGICFVIMLVALDQTIVGTALPTIVAELKGFDLYAW 60 M+ + A HSSGQVLPFRESL++ LGI FV MLVALDQT+VGTALPTIVAELKGF+LYAW Sbjct: 1 MAVHTAAHHSSGQVLPFRESLLSMLGISFVTMLVALDQTVVGTALPTIVAELKGFELYAW 60 Query: 61 VATSYLLTSVITVPIFGRLGDYFGRKPFLIASIIIFVIASMLCGMADSMLFLVLARGLQG 120 VATSYLLTSVITVPIFGRLGDY+GRKPF+IASI++F AS+LCG+AD+MLFLVLARGLQG Sbjct: 61 VATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTGASVLCGVADNMLFLVLARGLQG 120 Query: 121 IGGGMLVGTAFASAADLFPDPHIRLRWQIILSAAYGIATSVGPSLGGFLTQSLGWRWTFY 180 IGGGMLVGTAFA DLFPD +RLRWQ+++S+A+GIA +VGPSLGGFLTQ GWR FY Sbjct: 121 IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGFLTQYYGWRSVFY 180 Query: 181 VNLPVGLVSLFFAMRYIPHIRHHKNAGKVRLDWLGALLISVALGSLQLLVELFPKRGLTG 240 VNLPVG++SLFF R++PH+RH ++ GK+RLDW GA LI+VALGSLQL VEL PK GL+ Sbjct: 181 VNLPVGMLSLFFVWRFLPHLRHVEHEGKMRLDWPGAALIAVALGSLQLFVELLPKHGLSW 240 Query: 241 GMLALLVVAIGAFYALWKWERQVEQPILPFEMFKDPALSSLFLLSVLAGFSMFSMLMYAP 300 G ALLV+++ + YALW+WE++ ILP +MF++ +L++LF L+VL GF+MFS+L YAP Sbjct: 241 GACALLVLSVASAYALWQWEKRCPTAILPVDMFRNRSLAALFTLAVLGGFTMFSLLFYAP 300 Query: 301 LLFQGGFGMSPREAGLLITPLVACITVASIVNGRIVTRIPNPNMMMYVGFVLIALSCLGI 360 LLFQGGFGMSP+EAG++ITPLV IT+ SI NGR+V+R+ NPN+M+YVGF L+AL+C+G Sbjct: 301 LLFQGGFGMSPKEAGVVITPLVVFITIGSIANGRVVSRVRNPNLMLYVGFTLLALACVGA 360 Query: 361 VLSQRNTPTGFMLATMLAGGFGLGLVLPNLTVFAQQAASREHLGIATALLQSLRMIGGML 420 V++ R+ P +++ M+ GG GLG V+PNLT+FAQQ A REHLGIATALLQSLRMIGGM+ Sbjct: 361 VIATRSMPHWLLMSFMVLGGLGLGFVMPNLTIFAQQTAGREHLGIATALLQSLRMIGGMI 420 Query: 421 GTAVTGTLVTQMYGSGVERALESDHAAQWLAEFKDPEILVNHDIQSTLLAQMLQAGHNGS 480 GTA+TGTLV+ MY SGV ALE D A+QW + DP+IL+NH+ Q++LL Q+ AGHNG+ Sbjct: 421 GTALTGTLVSHMYASGVRSALERDRASQWFGDLSDPQILINHEAQASLLGQLAHAGHNGA 480 Query: 481 ALLDAARDALVGAIHMGIALAVVSALIGLWMVRRVPLIRFTPNEKVETVL 530 LL+ AR+ LV AIH G+A+A + A++ +W RRVP I+ K+E V+ Sbjct: 481 MLLETARETLVAAIHFGLAMAAIIAVVSVWQSRRVPPIKL--QRKLEPVI 528 >ref|ZP_02882622.1| drug resistance transporter, EmrB/QacA subfamily [Burkholderia graminis C4D1M] gb|EDT11825.1| drug resistance transporter, EmrB/QacA subfamily [Burkholderia graminis C4D1M] Length = 531 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/530 (66%), Positives = 440/530 (83%), Gaps = 2/530 (0%) Query: 1 MSPYKEAAHSSGQVLPFRESLMATLGICFVIMLVALDQTIVGTALPTIVAELKGFDLYAW 60 M+ + A HSSGQVLPFRESL+A LGI FV MLVALDQT+VGTALPTIVAELKGF+LYAW Sbjct: 1 MAVHTAAHHSSGQVLPFRESLLAMLGISFVTMLVALDQTVVGTALPTIVAELKGFELYAW 60 Query: 61 VATSYLLTSVITVPIFGRLGDYFGRKPFLIASIIIFVIASMLCGMADSMLFLVLARGLQG 120 VATSYLLTSVITVPIFGRLGDY+GRKPF+IASI++F AS+LCGMA++MLFLVLARGLQG Sbjct: 61 VATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLCGMANNMLFLVLARGLQG 120 Query: 121 IGGGMLVGTAFASAADLFPDPHIRLRWQIILSAAYGIATSVGPSLGGFLTQSLGWRWTFY 180 IGGGMLVGTAFA DLFPD +RLRWQ+++S+A+GIA +VGPSLGGFLTQ GWR FY Sbjct: 121 IGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSSAFGIANAVGPSLGGFLTQYYGWRSVFY 180 Query: 181 VNLPVGLVSLFFAMRYIPHIRHHKNAGKVRLDWLGALLISVALGSLQLLVELFPKRGLTG 240 VNLPVGL+SLFF R++PH+RH ++ GK+RLDW GA LI+VALGSLQL VEL PK GLT Sbjct: 181 VNLPVGLLSLFFVWRFLPHLRHVEHEGKMRLDWPGAALIAVALGSLQLFVELLPKHGLTL 240 Query: 241 GMLALLVVAIGAFYALWKWERQVEQPILPFEMFKDPALSSLFLLSVLAGFSMFSMLMYAP 300 ALLV++ + YALW+WE++ ILP +MF++P+L++LF L+VL GF+MFS+L YAP Sbjct: 241 SACALLVLSAASAYALWQWEKRCPTAILPVDMFRNPSLAALFTLAVLGGFTMFSLLFYAP 300 Query: 301 LLFQGGFGMSPREAGLLITPLVACITVASIVNGRIVTRIPNPNMMMYVGFVLIALSCLGI 360 LLFQGGFGMSP+EAG++ITPLV IT+ SI NGR+V+R+ NPN+M+YVGF LIAL+C G+ Sbjct: 301 LLFQGGFGMSPKEAGVVITPLVVFITIGSIANGRVVSRVRNPNLMLYVGFALIALACFGV 360 Query: 361 VLSQRNTPTGFMLATMLAGGFGLGLVLPNLTVFAQQAASREHLGIATALLQSLRMIGGML 420 V++ R+ P +++ M+ GG GLG V+PNLT+FAQQ A REHLGIATALLQSLRMIGGM+ Sbjct: 361 VVATRSMPHWLLMSFMVLGGLGLGFVMPNLTIFAQQTAGREHLGIATALLQSLRMIGGMI 420 Query: 421 GTAVTGTLVTQMYGSGVERALESDHAAQWLAEFKDPEILVNHDIQSTLLAQMLQAGHNGS 480 GTA+TGTL++ MY SGV LESD A+QW ++ DP+IL+NH+ Q+TLL ++ QAGHNG+ Sbjct: 421 GTALTGTLISHMYASGVRSTLESDRASQWFSDLGDPQILINHEAQTTLLGELAQAGHNGA 480 Query: 481 ALLDAARDALVGAIHMGIALAVVSALIGLWMVRRVPLIRFTPNEKVETVL 530 LL+ AR+ LV AIH G+A+A V A++ +W RRVP I+ K+E V+ Sbjct: 481 MLLETARETLVSAIHFGLAMAAVVAVVSVWQSRRVPPIKL--QRKLEPVV 528