BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0052.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776772.1| two component response regulator protein [He... 374 e-102 ref|YP_004752189.1| response regulators consisting of a CheY-lik... 345 3e-93 ref|ZP_08274423.1| response regulator transcription regulatory p... 320 8e-86 ref|YP_157648.1| two-component response regulatory protein [Arom... 225 4e-57 ref|ZP_02354612.1| two component transcriptional regulator, wing... 223 2e-56 >ref|YP_003776772.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64864.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] Length = 220 Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/222 (82%), Positives = 201/222 (90%), Gaps = 2/222 (0%) Query: 1 MNVLLVEDDLVLADGLSRMLKSHGLSVNTVNNGTDADALLQRYTATVLVLDIGLPGLDGF 60 MNVLLVEDD VL DGLSR+L SHG +V+TVNNG DA L QR+ A VLVLDIGLPG+DGF Sbjct: 1 MNVLLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDA--LSQRFNAAVLVLDIGLPGIDGF 58 Query: 61 EVVRRLRARGSNMPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSS 120 EV+RR+RA G+N PVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRS+ Sbjct: 59 EVLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSA 118 Query: 121 PQPTQLTIGGLSLDTSSKRATIDGKKVDFSVREWTVLEYLMQQASRVVSKQQIIDAVLPW 180 PQP QLT+GGLSLD ++KRA IDG+K++ S+REWTVLEYLMQ ASRVVSKQQIIDAVLPW Sbjct: 119 PQPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPW 178 Query: 181 GEDVTLNAVEVYVSRIRTKTAGSGVAIRTIRGFGYMLEKSEA 222 GED T+NAVEVYVSRIR K A SGVAIRTIRGFGYMLEKSEA Sbjct: 179 GEDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA 220 >ref|YP_004752189.1| response regulators consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein [Collimonas fungivorans Ter331] gb|AEK61366.1| Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein [Collimonas fungivorans Ter331] Length = 222 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 162/222 (72%), Positives = 198/222 (89%) Query: 1 MNVLLVEDDLVLADGLSRMLKSHGLSVNTVNNGTDADALLQRYTATVLVLDIGLPGLDGF 60 M++LLVEDD VLADG+ R+ K HG+ V+ V NG DADALLQR +V+VLDIGLPG+DGF Sbjct: 1 MHILLVEDDSVLADGILRIFKGHGMVVDVVRNGNDADALLQRTEISVVVLDIGLPGMDGF 60 Query: 61 EVVRRLRARGSNMPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSS 120 EV+RRLRARGS++PVLLLTARD++ DRV+GLELGADDYLVKPFAT ELVAR++AL+RRS+ Sbjct: 61 EVIRRLRARGSHIPVLLLTARDSVQDRVYGLELGADDYLVKPFATQELVARVRALLRRSA 120 Query: 121 PQPTQLTIGGLSLDTSSKRATIDGKKVDFSVREWTVLEYLMQQASRVVSKQQIIDAVLPW 180 PQP ++ +GGLSL+TSS+RA I+GK ++ SVREW VLEYL+QQASRVVS+QQIIDA+LPW Sbjct: 121 PQPLEMHLGGLSLNTSSRRAKINGKAIELSVREWAVLEYLLQQASRVVSRQQIIDAILPW 180 Query: 181 GEDVTLNAVEVYVSRIRTKTAGSGVAIRTIRGFGYMLEKSEA 222 G ++TLNAVEVY+SRIR K A +G+ IRTIRGFGYMLEK+EA Sbjct: 181 GAELTLNAVEVYISRIRLKIADAGIEIRTIRGFGYMLEKTEA 222 >ref|ZP_08274423.1| response regulator transcription regulatory protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32107.1| response regulator transcription regulatory protein [Oxalobacteraceae bacterium IMCC9480] Length = 222 Score = 320 bits (821), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 154/218 (70%), Positives = 184/218 (84%) Query: 1 MNVLLVEDDLVLADGLSRMLKSHGLSVNTVNNGTDADALLQRYTATVLVLDIGLPGLDGF 60 M+VLL EDD VLADG++R L+SHG+ V+ V+NG+ + ++ VLVLDIGLPG+DGF Sbjct: 1 MHVLLAEDDSVLADGIARALRSHGMVVDVVDNGSAVELAIKHAEIAVLVLDIGLPGIDGF 60 Query: 61 EVVRRLRARGSNMPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSS 120 EVVRRLR G +PVLLLTARD I DRVHG ELGADDYLVKPF+T ELVAR+KAL+RRS+ Sbjct: 61 EVVRRLRLHGMQVPVLLLTARDAIQDRVHGFELGADDYLVKPFSTLELVARLKALVRRSA 120 Query: 121 PQPTQLTIGGLSLDTSSKRATIDGKKVDFSVREWTVLEYLMQQASRVVSKQQIIDAVLPW 180 P+P +L+IGGL+LDT ++RA I + ++FSVREW VLEYLMQQASRVVSKQQIIDA+LPW Sbjct: 121 PKPIELSIGGLTLDTFARRAHIGTRSIEFSVREWAVLEYLMQQASRVVSKQQIIDAILPW 180 Query: 181 GEDVTLNAVEVYVSRIRTKTAGSGVAIRTIRGFGYMLE 218 GED+TLNAVEVYVSRIR K A S + IRTIRGFGY+LE Sbjct: 181 GEDLTLNAVEVYVSRIRLKIAPSNIVIRTIRGFGYLLE 218 >ref|YP_157648.1| two-component response regulatory protein [Aromatoleum aromaticum EbN1] emb|CAI06747.1| Two-component response regulatory protein [Aromatoleum aromaticum EbN1] Length = 228 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 154/222 (69%) Query: 1 MNVLLVEDDLVLADGLSRMLKSHGLSVNTVNNGTDADALLQRYTATVLVLDIGLPGLDGF 60 M +LL EDD V+A+GL R LK G +V+ V +G++AD L T +L+LD+GLP L G Sbjct: 1 MRILLAEDDQVIANGLGRALKRSGYAVDHVASGSEADTALATQTYDLLILDLGLPKLPGI 60 Query: 61 EVVRRLRARGSNMPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSS 120 +V++RLRAR S +PVL+LTA+D + +RV GL+ GADDYL KPFA PEL AR++AL RR + Sbjct: 61 DVLKRLRARKSALPVLILTAQDGVEERVRGLDAGADDYLTKPFALPELEARVRALTRRGT 120 Query: 121 PQPTQLTIGGLSLDTSSKRATIDGKKVDFSVREWTVLEYLMQQASRVVSKQQIIDAVLPW 180 QP + IG LS D + + A I+G+ V+ S RE +LE + R+VSK QI+D + W Sbjct: 121 GQPRCIEIGSLSYDQADRVAKINGQVVELSAREVGLLEVFALRVGRLVSKDQIVDHLCGW 180 Query: 181 GEDVTLNAVEVYVSRIRTKTAGSGVAIRTIRGFGYMLEKSEA 222 GE+V+ NA+EVYV R+R K SGV I T+RG GY LE +A Sbjct: 181 GEEVSSNAIEVYVHRLRKKLEDSGVRIVTVRGLGYCLENPDA 222 >ref|ZP_02354612.1| two component transcriptional regulator, winged helix family protein [Burkholderia oklahomensis EO147] ref|ZP_02361806.1| two component transcriptional regulator, winged helix family protein [Burkholderia oklahomensis C6786] Length = 250 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 1 MNVLLVEDDLVLADGLSRMLKSHGLSVNTVNNGTDADALLQRYTATVLVLDIGLPGLDGF 60 M +L+ EDD +LADGL+R L+ G +V+ V NG +AD L T +L+LD+GLP + G Sbjct: 4 MRILIAEDDSILADGLTRSLRQSGYAVDHVRNGAEADTALSMQTFDLLILDLGLPKMPGL 63 Query: 61 EVVRRLRARGSNMPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRR-S 119 +V+RRLRAR SN+PVL+LTA D++ +RV GL+LGADDY+ KPFA EL AR++AL RR + Sbjct: 64 DVLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGA 123 Query: 120 SPQPTQLTIGGLSLDTSSKRATIDGKKVDFSVREWTVLEYLMQQASRVVSKQQIIDAVLP 179 PT + G LS D + A + + +D S RE +LE L+Q+ R+VSK+Q++D + Sbjct: 124 GGGPTVVRHGSLSFDQVGRIACANDRVLDLSARELGLLEVLLQRIGRLVSKEQLVDHLCE 183 Query: 180 WGEDVTLNAVEVYVSRIRTKTAGSGVAIRTIRGFGYMLEK 219 WGE+V+ NA+EVYV R+R K SGV I T+RG GY LEK Sbjct: 184 WGEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEK 223