BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0041.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776779.1| nitrate/sulfonate/bicarbonate ABC transporte... 336 2e-90 ref|YP_004753122.1| nitrate/sulfonate/bicarbonate ABC transporte... 271 5e-71 ref|YP_003776778.1| nitrate/sulfonate/bicarbonate ABC transporte... 260 2e-67 ref|ZP_03265976.1| NMT1/THI5 like domain protein [Burkholderia s... 255 5e-66 ref|ZP_03266741.1| NMT1/THI5 like domain protein [Burkholderia s... 254 9e-66 >ref|YP_003776779.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64871.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 353 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/208 (83%), Positives = 186/208 (89%), Gaps = 2/208 (0%) Query: 13 GTVFSTALIGAAVLTVAAPAAQAADNKITIMVGGINKLIYLPPKLAENLGYFKEEGLDVE 72 G STA I A L +AAP A+AAD KI IMVGGINKLIYLPPKLAE+LGYFKEEGLDVE Sbjct: 23 GITVSTA-ITACALGLAAPQARAAD-KIIIMVGGINKLIYLPPKLAESLGYFKEEGLDVE 80 Query: 73 LQSQQAGVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVLSITQLLVVPGGMEMVRSDLA 132 LQSQ AGVDAENELLAGAVQAVVGYYDHSIDLQSKGKEV SI QLL+VPGGMEMVR+DLA Sbjct: 81 LQSQPAGVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVTSIAQLLLVPGGMEMVRADLA 140 Query: 133 TQVRSMADLKGRTLGVTGLGSSSSFLAQYLASRNGLKTSDYSMLPVGAGNTLIAALKQKR 192 VRSMADLKG+TLGVTGLGSSSSF+AQYLA+R GLK DYS+LPVGAGNTLIAA+KQKR Sbjct: 141 DSVRSMADLKGKTLGVTGLGSSSSFIAQYLANRAGLKAGDYSILPVGAGNTLIAAMKQKR 200 Query: 193 VDVVWTTEPTTSMLLASGEAKVLVDMXT 220 VDV WTTEPTTS+LLASG AKVLVDM + Sbjct: 201 VDVAWTTEPTTSILLASGAAKVLVDMSS 228 >ref|YP_004753122.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic proteins [Collimonas fungivorans Ter331] gb|AEK62299.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Collimonas fungivorans Ter331] Length = 356 Score = 271 bits (694), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 142/209 (67%), Positives = 166/209 (79%), Gaps = 3/209 (1%) Query: 13 GTVFSTALIGAAVLTVAAPAAQAADN-KITIMVGGINKLIYLPPKLAENLGYFKEEGLDV 71 G++ S L+G+ VL A A AAD+ KITIMVGGI K+IYLP KL E LGYFKEEGLDV Sbjct: 25 GSLLSAVLLGSGVL--GASQAMAADSGKITIMVGGITKMIYLPAKLTEQLGYFKEEGLDV 82 Query: 72 ELQSQQAGVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVLSITQLLVVPGGMEMVRSDL 131 ELQSQ AGVDAENELLAGAVQAVVG+YDHSIDLQSKGKEV +IT VPG +EMV + Sbjct: 83 ELQSQPAGVDAENELLAGAVQAVVGFYDHSIDLQSKGKEVTAITIFGQVPGEVEMVSTKA 142 Query: 132 ATQVRSMADLKGRTLGVTGLGSSSSFLAQYLASRNGLKTSDYSMLPVGAGNTLIAALKQK 191 A ++SMAD+KG+TLGVTGLGSS++FL QYLA++ G+ +S YS+LPVGA NT I A+KQ Sbjct: 143 AATIKSMADVKGKTLGVTGLGSSTNFLTQYLAAKAGITSSQYSVLPVGADNTFIVAIKQG 202 Query: 192 RVDVVWTTEPTTSMLLASGEAKVLVDMXT 220 R+D TTEPT S LL +GEA VLVDM T Sbjct: 203 RIDAGMTTEPTVSQLLKTGEASVLVDMRT 231 >ref|YP_003776778.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64870.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 337 Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 128/182 (70%), Positives = 152/182 (83%) Query: 39 KITIMVGGINKLIYLPPKLAENLGYFKEEGLDVELQSQQAGVDAENELLAGAVQAVVGYY 98 KITIMVGGINK++YLP KLAE LGYFKEEGLDVELQSQ AGVDAENELLAGAVQAVVG+Y Sbjct: 31 KITIMVGGINKMVYLPAKLAEQLGYFKEEGLDVELQSQPAGVDAENELLAGAVQAVVGFY 90 Query: 99 DHSIDLQSKGKEVLSITQLLVVPGGMEMVRSDLATQVRSMADLKGRTLGVTGLGSSSSFL 158 DHSIDLQ+KGKE+ +I L VPG +E+V + A +SMAD KG+TLGVTGLGSS++FL Sbjct: 91 DHSIDLQTKGKEITAIVILGQVPGEVELVSTKAAPHFQSMADAKGKTLGVTGLGSSTNFL 150 Query: 159 AQYLASRNGLKTSDYSMLPVGAGNTLIAALKQKRVDVVWTTEPTTSMLLASGEAKVLVDM 218 QYLASR+G+ + +S+LPVGA NT IAA+KQ R+D TTEPT S LL +G+A+VLVD+ Sbjct: 151 TQYLASRHGITSKQFSVLPVGADNTFIAAMKQGRIDAGMTTEPTASQLLKTGDAQVLVDL 210 Query: 219 XT 220 T Sbjct: 211 RT 212 >ref|ZP_03265976.1| NMT1/THI5 like domain protein [Burkholderia sp. H160] gb|EEA02399.1| NMT1/THI5 like domain protein [Burkholderia sp. H160] Length = 338 Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 133/218 (61%), Positives = 161/218 (73%), Gaps = 5/218 (2%) Query: 1 MRQRFNVCAYVIGTVFSTALIGAAVLTVAAPAAQAADNKITIMVGGINKLIYLPPKLAEN 60 MRQRF + G L G L A A KITIMVGGI KLIYLP +L E Sbjct: 1 MRQRFKAFRQITGAC--CLLFG---LAAQQHAMAAGSEKITIMVGGITKLIYLPARLTEQ 55 Query: 61 LGYFKEEGLDVELQSQQAGVDAENELLAGAVQAVVGYYDHSIDLQSKGKEVLSITQLLVV 120 LGYFK+EGLDVEL SQ AGVDAENELLAGAVQAVVG+YDH+IDLQ+KGK+V +I V Sbjct: 56 LGYFKDEGLDVELLSQPAGVDAENELLAGAVQAVVGFYDHTIDLQTKGKDVKAIVVFGQV 115 Query: 121 PGGMEMVRSDLATQVRSMADLKGRTLGVTGLGSSSSFLAQYLASRNGLKTSDYSMLPVGA 180 PG +EMV + A ++SM D+KG+TLGVTGLGSS+SFL QYLAS++G+++++Y+MLPVGA Sbjct: 116 PGEVEMVSTKAADTIKSMGDVKGKTLGVTGLGSSTSFLTQYLASQHGIQSTEYTMLPVGA 175 Query: 181 GNTLIAALKQKRVDVVWTTEPTTSMLLASGEAKVLVDM 218 + IAA+KQ R+D TTEPT S L +G+AKVLVDM Sbjct: 176 DASFIAAIKQGRIDAGMTTEPTVSALQKAGDAKVLVDM 213 >ref|ZP_03266741.1| NMT1/THI5 like domain protein [Burkholderia sp. H160] gb|EEA01647.1| NMT1/THI5 like domain protein [Burkholderia sp. H160] Length = 339 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 135/231 (58%), Positives = 162/231 (70%), Gaps = 8/231 (3%) Query: 38 NKITIMVGGINKLIYLPPKLAENLGYFKEEGLDVELQSQQAGVDAENELLAGAVQAVVGY 97 KITIMVGG K+IYLP KL E LGYFK+EGLDVE+ SQ AGVDAENELLAGAVQ VVG+ Sbjct: 27 EKITIMVGGATKIIYLPAKLTEQLGYFKDEGLDVEILSQPAGVDAENELLAGAVQGVVGF 86 Query: 98 YDHSIDLQSKGKEVLSITQLLVVPGGMEMVRSDLATQVRSMADLKGRTLGVTGLGSSSSF 157 YDH+IDLQSKGKEV ++ VPG +EMV + A ++SMAD+KG+TLGVTGLGSS+SF Sbjct: 87 YDHTIDLQSKGKEVQALVVFGQVPGEVEMVSTKAADSIKSMADVKGKTLGVTGLGSSTSF 146 Query: 158 LAQYLASRNGLKTSDYSMLPVGAGNTLIAALKQKRVDVVWTTEPTTSMLLASGEAKVLVD 217 L QYLA R G+ ++ Y+MLPVGA N+ IAA+KQ R+D TTEPT S LL +G+AKVLVD Sbjct: 147 LTQYLAQRAGVTSTQYTMLPVGADNSFIAAIKQSRIDAGMTTEPTVSQLLKTGDAKVLVD 206 Query: 218 MXTRRAGR-------PVSGFGGVCAGRLA-EDAQARSRQAGARICPYTAIH 260 M R P S F A A +D A+ A A+ + A H Sbjct: 207 MRNVEGTRAALGGTYPASSFYVQRAWAEAHKDEAAKLSHAFAKTLNFIATH 257