BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0032.p (915 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776807.1| lytic murein transglycosylase [Herbaspirillu... 803 0.0 ref|YP_004752119.1| membrane-bound lytic murein transglycosylase... 729 0.0 ref|ZP_08272593.1| Membrane-bound lytic murein transglycosylase ... 653 0.0 ref|YP_001352898.1| membrane-bound lytic murein transglycosylase... 650 0.0 ref|YP_001100575.1| lytic murein transglycosylase C, membrane-bo... 641 0.0 >ref|YP_003776807.1| lytic murein transglycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ64899.1| lytic murein transglycosylase protein [Herbaspirillum seropedicae SmR1] Length = 509 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/445 (86%), Positives = 413/445 (92%), Gaps = 2/445 (0%) Query: 1 LAIATLFSLGTPLLAHANDISIYPAAFNAINPNDPSSALPGMEDIDIWARIRKGFGIPDL 60 LAIA LF G PLL++ANDISIYPA FNAINP +ALPGM DIDIW RIRKGFGIPDL Sbjct: 8 LAIAALFCAGAPLLSYANDISIYPAPFNAINPELAGNALPGMNDIDIWTRIRKGFGIPDL 67 Query: 61 ENPLVDNQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPQA 120 +N LV++QTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNP+A Sbjct: 68 DNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPEA 127 Query: 121 LSTAKAAGMWQFIPSTGRDYNLKQNLFTDERRDVLASTDAALTYLQKLYGMFGDWQLALA 180 LSTAKAAGMWQFIPSTGRDYNLKQN+FTDERRDVLASTDAALTYLQKLYGMFGDWQLALA Sbjct: 128 LSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFGDWQLALA 187 Query: 181 AYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIAVPGEFGIEL 240 AYNWGEGSVQRAVNRNLAAG+PIDFNTLSAQMPNETRNYVPKLQAVKNIIA P F I L Sbjct: 188 AYNWGEGSVQRAVNRNLAAGMPIDFNTLSAQMPNETRNYVPKLQAVKNIIANPAAFDIAL 247 Query: 241 PKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGDDTKILLPESN 300 PKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGG+DTKILLPESN Sbjct: 248 PKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTKILLPESN 307 Query: 301 AEKFKTNISKFTQALSSWTSHTVSSARERIETIASRFGTTPDVIRSVNQIPPKMVLKAGS 360 AEKFK N+SK+TQA S+WT+HTVSSARERIETIAS+FGTTP+VIRSVNQIPP+MVLKAGS Sbjct: 308 AEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPRMVLKAGS 367 Query: 361 MILVPKTETS--MEADITPEMANSARLAVAPDVPDFKRIYVKVGKRDTLASIAGRYRVSV 418 ILVPKTE + ++ D+TPE+A++ARLA+APDVP+ +RIYVK GKRDTLA IA RYRV+V Sbjct: 368 TILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIASRYRVTV 427 Query: 419 VQIKQWNSLRHDTLANGQSLQLQVP 443 QIK+WN L+ DTLA GQSLQLQVP Sbjct: 428 AQIKEWNGLKRDTLAAGQSLQLQVP 452 >ref|YP_004752119.1| membrane-bound lytic murein transglycosylase D [Collimonas fungivorans Ter331] gb|AEK61296.1| Membrane-bound lytic murein transglycosylase D precursor [Collimonas fungivorans Ter331] Length = 502 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/434 (79%), Positives = 385/434 (88%), Gaps = 1/434 (0%) Query: 10 GTPLLAHANDISIYPAAFNAINPNDPSSALPGMEDIDIWARIRKGFGIPDLENPLVDNQT 69 GTPLLA ANDISIY F+ I+PNDPS+ + GME +DIWARIRKGFGIPDL+N V +QT Sbjct: 18 GTPLLAQANDISIYTPTFSLIDPNDPSAGMLGMEQVDIWARIRKGFGIPDLDNQQVVSQT 77 Query: 70 QWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPQALSTAKAAGM 129 +YS+RP+Y +RTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPQA S+AKAAGM Sbjct: 78 DFYSARPEYFERTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPQAYSSAKAAGM 137 Query: 130 WQFIPSTGRDYNLKQNLFTDERRDVLASTDAALTYLQKLYGMFGDWQLALAAYNWGEGSV 189 WQF+P+TGRDYNLKQN+F D+RRDVLASTDAALTYLQKLYGMFGDWQLALAAYNWGEGSV Sbjct: 138 WQFVPATGRDYNLKQNMFKDDRRDVLASTDAALTYLQKLYGMFGDWQLALAAYNWGEGSV 197 Query: 190 QRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIAVPGEFGIELPKVDNQPYF 249 QRA+N+N AAGLPIDFN+L+ MP ETRNYVPKLQAVKNIIA P + I LPKVDNQPYF Sbjct: 198 QRAINKNQAAGLPIDFNSLAPLMPAETRNYVPKLQAVKNIIAAPEMYNIALPKVDNQPYF 257 Query: 250 VTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGDDTKILLPESNAEKFKTNIS 309 VTIGKTR+IDVKVAAQLAELSLDEFKALNPQFNRPVIIG DTKILLPESNAEKFK N++ Sbjct: 258 VTIGKTRDIDVKVAAQLAELSLDEFKALNPQFNRPVIIGSSDTKILLPESNAEKFKNNLT 317 Query: 310 KFTQALSSWTSHTVSSARERIETIASRFGTTPDVIRSVNQIPPKMVLKAGSMILVPKTET 369 K+TQ LSSWTSHTVSSARERIETIA+RF TTP +IR VN IPP+M+LKAGS ILVPKTE Sbjct: 318 KWTQTLSSWTSHTVSSARERIETIAARFDTTPAIIREVNHIPPRMLLKAGSTILVPKTEA 377 Query: 370 SMEADITPEMANSARLAVAPDVPDFKRIYVKVGKRDTLASIAGRYRVSVVQIKQWNSLRH 429 S +DIT E+A++A +AV PD P+ +RIYVKVGKRDTLASIA RYRVSV Q+K WN L Sbjct: 378 S-SSDITAEVADNATMAVTPDAPETRRIYVKVGKRDTLASIASRYRVSVAQVKAWNGLHR 436 Query: 430 DTLANGQSLQLQVP 443 D ++ GQSLQLQVP Sbjct: 437 DGVSRGQSLQLQVP 450 >ref|ZP_08272593.1| Membrane-bound lytic murein transglycosylase D precursor [Oxalobacteraceae bacterium IMCC9480] gb|EGF33946.1| Membrane-bound lytic murein transglycosylase D precursor [Oxalobacteraceae bacterium IMCC9480] Length = 491 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/469 (66%), Positives = 372/469 (79%), Gaps = 2/469 (0%) Query: 1 LAIATLFSLGTPLLAHANDISIYPAAFN-AINPNDPSSALPGMEDIDIWARIRKGFGIPD 59 L L P + AND+SI P+ + +P+DP + + +E++D+W RIR GFGIPD Sbjct: 9 LTFTAFLLLAAPHASQANDLSISPSITDYTYDPSDPVTQVLAIEELDVWGRIRNGFGIPD 68 Query: 60 LENPLVDNQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPQ 119 L+NPLV +QT WYS+RP+YIQRTT+RASRYLFHV+QELEKR MPTELALLPFIESAFNP+ Sbjct: 69 LDNPLVLSQTNWYSARPEYIQRTTLRASRYLFHVLQELEKRDMPTELALLPFIESAFNPE 128 Query: 120 ALSTAKAAGMWQFIPSTGRDYNLKQNLFTDERRDVLASTDAALTYLQKLYGMFGDWQLAL 179 A S+AKA+GMWQFIPSTG D+NLKQN+F DERRDVLASTDAALTYLQKL+GMFGDWQLAL Sbjct: 129 AYSSAKASGMWQFIPSTGLDFNLKQNMFKDERRDVLASTDAALTYLQKLHGMFGDWQLAL 188 Query: 180 AAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIAVPGEFGIE 239 AAYNWGEGSVQRA+ +N A GL DFN+LSA MP ETRNYVPKLQAVKNIIA P FGI Sbjct: 189 AAYNWGEGSVQRAIKKNQANGLATDFNSLSALMPAETRNYVPKLQAVKNIIATPEAFGIT 248 Query: 240 LPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGDDTKILLPES 299 LPK DNQPYFVTIG+TR+ID+KVAAQLAE++LDEFK+LNPQFNRPVI G TKILLP+ Sbjct: 249 LPKADNQPYFVTIGRTRDIDLKVAAQLAEITLDEFKSLNPQFNRPVITGSASTKILLPQQ 308 Query: 300 NAEKFKTNISKFTQALSSWTSHTVSSARERIETIASRFGTTPDVIRSVNQIPPKMVLKAG 359 NAE+FK N++++ + LSSW +HTV+ RERIE IA+ F T P V+R VN IPP M LKAG Sbjct: 309 NAERFKINLAQWNRPLSSWMAHTVTK-RERIEAIATLFNTEPQVLRDVNHIPPNMRLKAG 367 Query: 360 SMILVPKTETSMEADITPEMANSARLAVAPDVPDFKRIYVKVGKRDTLASIAGRYRVSVV 419 S ILVPKT + E DIT E+A++A +++ PDVPDF+RI V+VGKRD LASIA RY V+V Sbjct: 368 STILVPKTAKAAETDITAEVADNAVISMEPDVPDFRRIAVRVGKRDNLASIAQRYNVTVA 427 Query: 420 QIKQWNSLRHDTLANGQSLQLQVPYQTPAAAPVXGTATGAGTPGNPCAG 468 Q+K WN L+ DTL +GQ+LQ+QVPY+ A A P AG Sbjct: 428 QVKNWNDLQRDTLRSGQTLQVQVPYRASAKTGQRTVRVAANRPHRKDAG 476 >ref|YP_001352898.1| membrane-bound lytic murein transglycosylase D precursor [Janthinobacterium sp. Marseille] gb|ABR88365.1| membrane-bound lytic murein transglycosylase D precursor [Janthinobacterium sp. Marseille] Length = 531 Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/443 (70%), Positives = 368/443 (83%), Gaps = 13/443 (2%) Query: 14 LAHANDISIYPAAFNAI-------NP---NDPSSALPGMEDIDIWARIRKGFGIPDL-EN 62 L+HA+D+S+ P +N + NP NDP S D+D+WARIRKGF IPDL +N Sbjct: 33 LSHASDLSLPP--YNWVQDAALQDNPSLANDPLSEFVVASDVDVWARIRKGFAIPDLTDN 90 Query: 63 PLVDNQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPQALS 122 LV NQT WYSSRPDYI RTT RAS YL+HVV+ELEKRGMPTELALLPFIESAFNPQA S Sbjct: 91 QLVINQTIWYSSRPDYIGRTTKRASLYLYHVVEELEKRGMPTELALLPFIESAFNPQAYS 150 Query: 123 TAKAAGMWQFIPSTGRDYNLKQNLFTDERRDVLASTDAALTYLQKLYGMFGDWQLALAAY 182 TAKAAGMWQFIPSTGRD+NLKQN+F DERR VLASTDAALTYLQKLYGMFGDWQLALAAY Sbjct: 151 TAKAAGMWQFIPSTGRDFNLKQNMFKDERRSVLASTDAALTYLQKLYGMFGDWQLALAAY 210 Query: 183 NWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIAVPGEFGIELPK 242 NWGEGSVQRA+ + AAG+ DFN+LSA MP ETRNYVPKLQAVKNIIA P +GI L K Sbjct: 211 NWGEGSVQRAIRKAEAAGVGTDFNSLSAYMPAETRNYVPKLQAVKNIIASPDAYGITLLK 270 Query: 243 VDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGDDTKILLPESNAE 302 VDNQPYFV+I KTR+IDVK+AAQLAEL +DEFKALNPQFNRPVI G +T+ILLP+SNAE Sbjct: 271 VDNQPYFVSIAKTRDIDVKLAAQLAELPMDEFKALNPQFNRPVITGSSNTQILLPQSNAE 330 Query: 303 KFKTNISKFTQALSSWTSHTVSSARERIETIASRFGTTPDVIRSVNQIPPKMVLKAGSMI 362 KFK N++K++ ALSSWT+H V++ARERIETIA++F TTP VIR VN IPPKM+LKAGS + Sbjct: 331 KFKANLAKWSHALSSWTAHKVTNARERIETIAAKFHTTPQVIREVNNIPPKMLLKAGSTV 390 Query: 363 LVPKTETSMEADITPEMANSARLAVAPDVPDFKRIYVKVGKRDTLASIAGRYRVSVVQIK 422 LVP+T+ + + DIT E+A++A LA+ PDVPD KRI V V K+DT+ ++A RY+VS+ QIK Sbjct: 391 LVPRTDETAQKDITQEVADNATLAMTPDVPDTKRINVVVKKKDTINTLASRYKVSIAQIK 450 Query: 423 QWNSLRHDTLANGQSLQLQVPYQ 445 WN+L HD LA+GQ L++ VPY+ Sbjct: 451 SWNNLSHDKLASGQKLEIHVPYK 473 >ref|YP_001100575.1| lytic murein transglycosylase C, membrane-bound [Herminiimonas arsenicoxydans] emb|CAL62453.1| Putative lytic transglycosylase [Herminiimonas arsenicoxydans] Length = 514 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/463 (67%), Positives = 374/463 (80%), Gaps = 14/463 (3%) Query: 1 LAIATLFSLGTPLLAHA-NDISIYPAAFNAI--------NPN---DPSSALPGMEDIDIW 48 L A++F LG ++HA +D+S+ P ++++ NPN DP S D+D+W Sbjct: 12 LVAASIFLLGISSISHAASDLSL-PYSYSSWAQDAALQDNPNLANDPLSEFVVASDVDVW 70 Query: 49 ARIRKGFGIPDL-ENPLVDNQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELA 107 ARIRKGF IPDL +N LV NQT WYSSRP+YI RTT RAS YL+HVV+ELEKRGMPTELA Sbjct: 71 ARIRKGFAIPDLVDNQLVINQTVWYSSRPEYIGRTTKRASLYLYHVVEELEKRGMPTELA 130 Query: 108 LLPFIESAFNPQALSTAKAAGMWQFIPSTGRDYNLKQNLFTDERRDVLASTDAALTYLQK 167 LLPFIESAFNPQA STAKAAGMWQFIPSTG D+NLKQN+F DERR VLASTDAALTYLQ+ Sbjct: 131 LLPFIESAFNPQAYSTAKAAGMWQFIPSTGLDFNLKQNMFKDERRSVLASTDAALTYLQR 190 Query: 168 LYGMFGDWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVK 227 LYGMFGDWQLALAAYNWGEGSVQRA+ + AAG+ DFN+LSA MP ET+NYVPKLQAVK Sbjct: 191 LYGMFGDWQLALAAYNWGEGSVQRAIKKAEAAGVGTDFNSLSAYMPAETKNYVPKLQAVK 250 Query: 228 NIIAVPGEFGIELPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVII 287 NIIA P +GI L KVDNQPYFV++ KTR+IDVK+AAQLAEL ++EFKALNPQFNRPVI Sbjct: 251 NIIATPDAYGISLLKVDNQPYFVSVAKTRDIDVKLAAQLAELPMEEFKALNPQFNRPVIT 310 Query: 288 GGDDTKILLPESNAEKFKTNISKFTQALSSWTSHTVSSARERIETIASRFGTTPDVIRSV 347 G +T+ILLP+ NAEKFK N++K++ ALSSWT+H +++ARERIET+A+RF TTP VIR V Sbjct: 311 GSSNTQILLPQGNAEKFKINLAKWSHALSSWTAHKITNARERIETVAARFHTTPQVIREV 370 Query: 348 NQIPPKMVLKAGSMILVPKTETSMEADITPEMANSARLAVAPDVPDFKRIYVKVGKRDTL 407 N IPPKMVLKAGS ILVP+ E + DIT E+A++ARLA+APD PD KRI V V K+D+ Sbjct: 371 NNIPPKMVLKAGSTILVPRMEGMAQKDITQEVADNARLAMAPDAPDSKRINVTVKKQDSF 430 Query: 408 ASIAGRYRVSVVQIKQWNSLRHDTLANGQSLQLQVPYQTPAAA 450 SIA RY+V++ QIK WN+LR D LA+GQ L+L +P++ + A Sbjct: 431 TSIANRYKVTIAQIKNWNNLRGDKLAHGQKLELHIPFRIASKA 473