BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0031.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754746.1| ribose ABC transport system, ATP-binding pro... 275 1e-72 ref|YP_003775701.1| sugar ABC transporter ATPase [Herbaspirillum... 255 2e-66 ref|ZP_08273308.1| Ribose ABC transport system, ATP-binding prot... 236 9e-61 ref|YP_001857465.1| ABC transporter-like protein [Burkholderia p... 234 4e-60 ref|YP_773396.1| ABC transporter-like protein [Burkholderia ambi... 229 1e-58 >ref|YP_004754746.1| ribose ABC transport system, ATP-binding protein RbsA [Collimonas fungivorans Ter331] gb|AEK63923.1| Ribose ABC transport system, ATP-binding protein RbsA [Collimonas fungivorans Ter331] Length = 533 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 131/159 (82%), Positives = 143/159 (89%) Query: 5 SSPALLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTTGA 64 S+ LLSLSGIGKTYVEPVLS+V++ + PGQILALTGENGAGKSTLSKIVCGLV +TTG Sbjct: 18 SAVPLLSLSGIGKTYVEPVLSDVTISISPGQILALTGENGAGKSTLSKIVCGLVDATTGG 77 Query: 65 MQLDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKLAAL 124 MQLDGQPY+P SR EAE LGIRMVMQELNLIPTLSIAENL+ NQLP RFGWIDK +LA Sbjct: 78 MQLDGQPYRPGSRKEAEHLGIRMVMQELNLIPTLSIAENLYFNQLPHRFGWIDKARLAED 137 Query: 125 AQAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163 + QMAAVGLTD+DPWTPVG+LGVGHQQMVEIARNLIGS Sbjct: 138 TRIQMAAVGLTDLDPWTPVGELGVGHQQMVEIARNLIGS 176 >ref|YP_003775701.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63793.1| ABC-type sugar transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 522 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 120/155 (77%), Positives = 135/155 (87%) Query: 9 LLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTTGAMQLD 68 LL+LSGIGK Y PVL + L+LRPGQ+LALTGENGAGKSTLSKI+CGLV ++ G M LD Sbjct: 13 LLTLSGIGKRYAAPVLDGIDLDLRPGQVLALTGENGAGKSTLSKIICGLVDASAGGMMLD 72 Query: 69 GQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKLAALAQAQ 128 GQPY P SRT+AE LGIRMVMQELNLIPTLSIAENLFL +LP+RFGWID+ KLA A+AQ Sbjct: 73 GQPYAPASRTQAEGLGIRMVMQELNLIPTLSIAENLFLEKLPRRFGWIDRKKLAEAARAQ 132 Query: 129 MAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163 M VGL ++DPWTPVGDLG+GHQQMVEIARNLIGS Sbjct: 133 MEVVGLGELDPWTPVGDLGLGHQQMVEIARNLIGS 167 >ref|ZP_08273308.1| Ribose ABC transport system, ATP-binding protein RbsA [Oxalobacteraceae bacterium IMCC9480] gb|EGF33235.1| Ribose ABC transport system, ATP-binding protein RbsA [Oxalobacteraceae bacterium IMCC9480] Length = 516 Score = 236 bits (602), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 111/161 (68%), Positives = 137/161 (85%) Query: 3 NPSSPALLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTT 62 N ++ ALL+LSGIGKTYV+ VL +VSL L GQ+LALTGENGAGKST+SKI+CGL ++ Sbjct: 6 NANANALLTLSGIGKTYVQTVLQDVSLSLHAGQVLALTGENGAGKSTVSKIICGLEPASA 65 Query: 63 GAMQLDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKLA 122 G+M LDG+PYQP SR++AE G+RMV+QELNLIPTLS+AENL+L QLP RFGWI++ +L Sbjct: 66 GSMLLDGRPYQPVSRSDAEAHGMRMVLQELNLIPTLSVAENLYLRQLPGRFGWINRRQLE 125 Query: 123 ALAQAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163 A+ QMA VGLT+IDPWT VG+LG+GHQQM+EIARNLIG Sbjct: 126 QDARVQMARVGLTNIDPWTLVGELGIGHQQMIEIARNLIGD 166 >ref|YP_001857465.1| ABC transporter-like protein [Burkholderia phymatum STM815] gb|ACC70419.1| ABC transporter related [Burkholderia phymatum STM815] Length = 520 Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 117/158 (74%), Positives = 135/158 (85%), Gaps = 1/158 (0%) Query: 7 PALLSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQSTTGAMQ 66 PA+LS++GIGKTYVEPVL++VSL LR G+ LALTGENGAGKSTLSKI+ GLV TTGAMQ Sbjct: 2 PAVLSVTGIGKTYVEPVLADVSLALRAGEALALTGENGAGKSTLSKIIGGLVDPTTGAMQ 61 Query: 67 LDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQR-FGWIDKPKLAALA 125 L+G+PY P SRT+AE LGIRMVMQELNL+PTLS+AENLFLN+LP+ FGWID+ L A A Sbjct: 62 LEGKPYAPVSRTQAEALGIRMVMQELNLLPTLSVAENLFLNRLPRNGFGWIDRKTLRAHA 121 Query: 126 QAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163 + MA VGL IDP T VG+LG+GHQQMVEIARNLIG Sbjct: 122 REAMAQVGLDAIDPDTLVGELGIGHQQMVEIARNLIGD 159 >ref|YP_773396.1| ABC transporter-like protein [Burkholderia ambifaria AMMD] gb|ABI87062.1| monosaccharide ABC transporter ATP-binding protein, CUT2 family [Burkholderia ambifaria AMMD] Length = 537 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 115/162 (70%), Positives = 133/162 (82%), Gaps = 2/162 (1%) Query: 4 PSSPAL--LSLSGIGKTYVEPVLSEVSLELRPGQILALTGENGAGKSTLSKIVCGLVQST 61 PS A+ LS+SG+GKTY EPVL++V+L L PG+ LALTGENGAGKSTLSKI+ GLV T Sbjct: 7 PSRSAIPVLSVSGVGKTYAEPVLADVTLTLAPGEALALTGENGAGKSTLSKIIGGLVDPT 66 Query: 62 TGAMQLDGQPYQPRSRTEAEQLGIRMVMQELNLIPTLSIAENLFLNQLPQRFGWIDKPKL 121 TG MQL GQ Y P SRT+AE LG+RMVMQELNL+PTL++AENLFLN+LP+RFG ID+ +L Sbjct: 67 TGTMQLGGQAYAPASRTQAEALGVRMVMQELNLLPTLTVAENLFLNRLPRRFGIIDRARL 126 Query: 122 AALAQAQMAAVGLTDIDPWTPVGDLGVGHQQMVEIARNLIGS 163 AQA MA VGL IDP TPVG LG+GHQQMVEIARNLIG Sbjct: 127 HDDAQAAMARVGLDAIDPDTPVGALGIGHQQMVEIARNLIGD 168