BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0009.p         (122 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001352884.1| ABC-type multidrug transport system, ATPase ...    94   8e-18
ref|YP_004752172.1| putative ABC transporter transmembrane regio...    91   6e-17
ref|YP_001099363.1| putative ABC transporter permease [Herminiim...    81   5e-14

>ref|YP_001352884.1| ABC-type multidrug transport system, ATPase and permease
          components [Janthinobacterium sp. Marseille]
 gb|ABR89700.1| ABC-type multidrug transport system, ATPase and permease
          components [Janthinobacterium sp. Marseille]
          Length = 595

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 52/63 (82%)

Query: 26 MSSSVKPEPAKGSIKTLIGLLPFLQPYKRQFLLAGLALIVAAAATLAIPYAFRQMIDLGF 85
          M+     E  KGSI TL GLL FL PYK+QF+LAG+ALIVAAAATLAIPYAFRQMIDLGF
Sbjct: 1  MTIQTSRELQKGSIATLRGLLKFLLPYKKQFVLAGIALIVAAAATLAIPYAFRQMIDLGF 60

Query: 86 GSS 88
          G++
Sbjct: 61 GAN 63


>ref|YP_004752172.1| putative ABC transporter transmembrane region [Collimonas
          fungivorans Ter331]
 gb|AEK61349.1| putative ABC transporter, transmembrane region [Collimonas
          fungivorans Ter331]
          Length = 598

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/62 (67%), Positives = 51/62 (82%)

Query: 26 MSSSVKPEPAKGSIKTLIGLLPFLQPYKRQFLLAGLALIVAAAATLAIPYAFRQMIDLGF 85
          M++    EP K S+ TL+GL+PFL PYKRQF++A LAL+VAA ATLAIPYAFRQMIDLGF
Sbjct: 1  MTTITSKEPQKSSLGTLVGLVPFLAPYKRQFVMASLALLVAAGATLAIPYAFRQMIDLGF 60

Query: 86 GS 87
           +
Sbjct: 61 SA 62


>ref|YP_001099363.1| putative ABC transporter permease [Herminiimonas arsenicoxydans]
 emb|CAL61236.1| ABC transporter, putative xenobiotic-transporting ATPase
          [Herminiimonas arsenicoxydans]
          Length = 579

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 42/45 (93%)

Query: 44 GLLPFLQPYKRQFLLAGLALIVAAAATLAIPYAFRQMIDLGFGSS 88
          GLL FL PYK+QF LAG+ALIVAAAATLAIPYAFRQMIDLGFG++
Sbjct: 3  GLLKFLLPYKKQFALAGIALIVAAAATLAIPYAFRQMIDLGFGAN 47