BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0002.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774859.1| YecA family protein [Herbaspirillum seropedi... 411 e-113 ref|YP_004753874.1| hypothetical protein CFU_3227 [Collimonas fu... 355 2e-96 ref|ZP_08275325.1| hypothetical protein IMCC9480_177 [Oxalobacte... 353 9e-96 ref|YP_001099193.1| putative protein translocase subunit [Hermin... 337 1e-90 ref|YP_001352543.1| hypothetical protein mma_0853 [Janthinobacte... 336 2e-90 >ref|YP_003774859.1| YecA family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62951.1| YecA family protein [Herbaspirillum seropedicae SmR1] Length = 233 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/228 (84%), Positives = 209/228 (91%) Query: 1 MQLDQPLSDEEFDELDDFLLSDRCAEDAMTMDTLHGFLTALVIGPQEILMAEWLPRVWGS 60 M LDQPLSD EFDELDDFLLSDRCA+D MTMDTLHG+LTAL IGPQE+LMAEWLPRVWGS Sbjct: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 Query: 61 KPEDTPKFKNPKEAERITGLIARSMNEIAITLEVAPKEYEPLFCEREHEGKSLLDGEAWS 120 +PEDTPKFKN KEAERIT LIARSMNEIAIT EVAPKEYEPLFCEREHEGK LLD EAW+ Sbjct: 61 RPEDTPKFKNGKEAERITSLIARSMNEIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWA 120 Query: 121 WGFWEGIQMRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGFWEGIQ+RA++WD IFHSNLA LMRPIYLLGSDELEEEE L++DP+KTHKLA+E+E+ Sbjct: 121 WGFWEGIQLRAEQWDEIFHSNLAPLMRPIYLLGSDELEEEETKLIDDPIKTHKLAIEIEA 180 Query: 181 AIPHIYKYWLPHRKSAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGAD 228 AIPHI++YW P RKSAVE V+RD PK GRND CPCGSGKKYKKCCGAD Sbjct: 181 AIPHIHRYWAPKRKSAVEQVQRDAPKTGRNDPCPCGSGKKYKKCCGAD 228 >ref|YP_004753874.1| hypothetical protein CFU_3227 [Collimonas fungivorans Ter331] gb|AEK63051.1| conserved hypothetical protein; putative protein translocase subunit [Collimonas fungivorans Ter331] Length = 232 Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 176/228 (77%), Positives = 207/228 (90%) Query: 1 MQLDQPLSDEEFDELDDFLLSDRCAEDAMTMDTLHGFLTALVIGPQEILMAEWLPRVWGS 60 M LD+PLSD+EFDELDDFLLSDRCAED+MTMDTLHG+LTALVIGP+++L+ EWLP VWG Sbjct: 1 MNLDEPLSDKEFDELDDFLLSDRCAEDSMTMDTLHGYLTALVIGPEQVLLGEWLPHVWGP 60 Query: 61 KPEDTPKFKNPKEAERITGLIARSMNEIAITLEVAPKEYEPLFCEREHEGKSLLDGEAWS 120 +D PKFK+ KE E+I GLIAR MNEIA+TLEVAPKEYEPLFCE+E+EGKSLLDGEAW+ Sbjct: 61 SLKDAPKFKSDKEYEKIVGLIARYMNEIAVTLEVAPKEYEPLFCEQEYEGKSLLDGEAWT 120 Query: 121 WGFWEGIQMRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGFWEGI +RAK W+PI+HSNLA ++RPIYLLG++ELEEEE+AL EDPV+ HKLAVEVE+ Sbjct: 121 WGFWEGINLRAKAWEPIWHSNLATVVRPIYLLGAEELEEEEMALREDPVQRHKLAVEVEA 180 Query: 181 AIPHIYKYWLPHRKSAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGAD 228 AIP IY+YWLPHRKSAV T++R+ PK GRND+CPCGSGKK+KKCCG D Sbjct: 181 AIPEIYRYWLPHRKSAVTTIQRETPKVGRNDECPCGSGKKFKKCCGVD 228 >ref|ZP_08275325.1| hypothetical protein IMCC9480_177 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31204.1| hypothetical protein IMCC9480_177 [Oxalobacteraceae bacterium IMCC9480] Length = 229 Score = 353 bits (907), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 163/229 (71%), Positives = 191/229 (83%) Query: 1 MQLDQPLSDEEFDELDDFLLSDRCAEDAMTMDTLHGFLTALVIGPQEILMAEWLPRVWGS 60 M LDQPLSD+EFDELD FLLSDRCAED MTMD+LHG+ TALVIGP+ + +AEWLP +WG Sbjct: 1 MHLDQPLSDKEFDELDKFLLSDRCAEDCMTMDSLHGYFTALVIGPEMVPLAEWLPPIWGE 60 Query: 61 KPEDTPKFKNPKEAERITGLIARSMNEIAITLEVAPKEYEPLFCEREHEGKSLLDGEAWS 120 E P FKNPKE + I GLI+R MNE+AIT EVAPKE+EPLFCE E EGK LLDGEAW+ Sbjct: 61 SDETGPDFKNPKEFDHIVGLISRFMNEVAITFEVAPKEFEPLFCEFEFEGKQLLDGEAWA 120 Query: 121 WGFWEGIQMRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGFWEG Q+RA W PI+ SNLA++MRPIYLLG++E+EE E+ LV+ P+K HK+ +E+ES Sbjct: 121 WGFWEGTQLRADAWAPIWTSNLADIMRPIYLLGAEEIEESEMHLVDTPLKAHKMTIEIES 180 Query: 181 AIPHIYKYWLPHRKSAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGADK 229 AIPHI KYW P R S VETV+RD PK GRNDDCPCGSGKK+KKCCGAD+ Sbjct: 181 AIPHILKYWAPIRTSGVETVQRDSPKVGRNDDCPCGSGKKFKKCCGADE 229 >ref|YP_001099193.1| putative protein translocase subunit [Herminiimonas arsenicoxydans] emb|CAL61066.1| Conserved hypothetical protein, putative preprotein translocase subunit SecA [Herminiimonas arsenicoxydans] Length = 231 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 163/228 (71%), Positives = 195/228 (85%) Query: 1 MQLDQPLSDEEFDELDDFLLSDRCAEDAMTMDTLHGFLTALVIGPQEILMAEWLPRVWGS 60 M LDQPLSD+EFDELD FLLSDR A+D M MD+LHG+LTALV+GP+E+ +AEWLP VWG Sbjct: 1 MHLDQPLSDKEFDELDKFLLSDRTADDCMAMDSLHGYLTALVVGPEEVPLAEWLPHVWGE 60 Query: 61 KPEDTPKFKNPKEAERITGLIARSMNEIAITLEVAPKEYEPLFCEREHEGKSLLDGEAWS 120 E PKFKN KE ERI GLIAR MNEIAITLEVAPKEYEPLFCE E EGK +LDGEAW+ Sbjct: 61 NAEAVPKFKNDKEYERIVGLIARFMNEIAITLEVAPKEYEPLFCEHEWEGKPVLDGEAWA 120 Query: 121 WGFWEGIQMRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGF G+ +RA+ W+PI SN+A LMRPIYLLG++E+EEEE+ LV++PVK HKL +E+E+ Sbjct: 121 WGFNLGMSLRAEAWEPIHTSNIAPLMRPIYLLGAEEIEEEELVLVDNPVKCHKLTIEIEA 180 Query: 181 AIPHIYKYWLPHRKSAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGAD 228 AIP I+K+WLPHRKSAV+TV+R+ PK GRND+C CGSGKK+KKCCGA+ Sbjct: 181 AIPEIHKFWLPHRKSAVKTVQRETPKVGRNDECSCGSGKKFKKCCGAE 228 >ref|YP_001352543.1| hypothetical protein mma_0853 [Janthinobacterium sp. Marseille] gb|ABR90375.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 234 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 165/227 (72%), Positives = 194/227 (85%) Query: 1 MQLDQPLSDEEFDELDDFLLSDRCAEDAMTMDTLHGFLTALVIGPQEILMAEWLPRVWGS 60 M LDQPLSD+EFDELD FLLSDR A+D M MD+LHG+LTALV+GP+E+ +AEWLP VWG Sbjct: 1 MHLDQPLSDKEFDELDKFLLSDRTADDCMAMDSLHGYLTALVVGPEEVPLAEWLPHVWGE 60 Query: 61 KPEDTPKFKNPKEAERITGLIARSMNEIAITLEVAPKEYEPLFCEREHEGKSLLDGEAWS 120 E PKFKN KE ERI GLIAR MNEIAITLEVAPKEYEPLFCE E EGK +LDGEAW+ Sbjct: 61 NAEAIPKFKNDKEYERIVGLIARFMNEIAITLEVAPKEYEPLFCEHEWEGKPVLDGEAWA 120 Query: 121 WGFWEGIQMRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGF G+ +RA+ W+PI SN+A LMRPIYLLG++E+EEEEI LV++P+K HKL +E+ES Sbjct: 121 WGFNLGMSLRAEAWEPINSSNIAPLMRPIYLLGAEEIEEEEIVLVDNPIKCHKLTIEIES 180 Query: 181 AIPHIYKYWLPHRKSAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGA 227 AIP I+K+WLPHRKSAV+TV+R+ PK GRND+C CGSGKKYKKCCGA Sbjct: 181 AIPEIHKFWLPHRKSAVKTVQREEPKIGRNDECSCGSGKKYKKCCGA 227