BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0001.p         (114 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001020295.1| putative integral membrane protein [Methylib...   120   1e-25
ref|YP_548083.1| hypothetical protein Bpro_1234 [Polaromonas sp....   115   3e-24
ref|ZP_05086490.1| conserved hypothetical protein [Pseudovibrio ...   112   3e-23
ref|YP_522849.1| hypothetical protein Rfer_1586 [Rhodoferax ferr...   110   7e-23
ref|ZP_08275074.1| putative integral membrane protein [Oxalobact...   109   1e-22

>ref|YP_001020295.1| putative integral membrane protein [Methylibium petroleiphilum PM1]
 gb|ABM94060.1| putative integral membrane protein [Methylibium petroleiphilum PM1]
          Length = 255

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 77/106 (72%)

Query: 2   SGFTSFIANAGGPPFVIYLAPQQLDKLVFVGTSVIFFSVINAVKVVPFVLLGLFDTRNLT 61
           +G+TSF+A+AGGPP + YL P +L  LVF GT+ +FF+ +NA K +P+  LGL D RNLT
Sbjct: 143 AGYTSFVAHAGGPPALAYLMPLKLRPLVFAGTTAVFFAAVNASKWIPYAWLGLIDLRNLT 202

Query: 62  TSLALLPLAPVGYWLGLKLLMKVDQVRFYQITIAALFVAGCKLLWD 107
           TSL L+PLAP+G W+G++L  +V+   FY++    + + G KLLWD
Sbjct: 203 TSLLLMPLAPIGVWIGVRLARRVEPTLFYRLLSLGMLLTGVKLLWD 248


>ref|YP_548083.1| hypothetical protein Bpro_1234 [Polaromonas sp. JS666]
 gb|ABE43185.1| protein of unknown function DUF81 [Polaromonas sp. JS666]
          Length = 251

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 72/106 (67%)

Query: 2   SGFTSFIANAGGPPFVIYLAPQQLDKLVFVGTSVIFFSVINAVKVVPFVLLGLFDTRNLT 61
           SGFTSF+A+AGGPP   Y+ P +L  + F  T   FF VIN  K +P+ LLGL D RN+ 
Sbjct: 143 SGFTSFVAHAGGPPLSAYVIPMRLSPIKFTATMAAFFFVINLSKWIPYGLLGLLDLRNMA 202

Query: 62  TSLALLPLAPVGYWLGLKLLMKVDQVRFYQITIAALFVAGCKLLWD 107
           TSL LLPLAPVG W+G++L  ++  V FY++    + + GCKL+WD
Sbjct: 203 TSLVLLPLAPVGVWIGVRLARRISPVLFYRLLYVGMLLTGCKLVWD 248


>ref|ZP_05086490.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gb|EEA93015.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 254

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 77/107 (71%)

Query: 1   MSGFTSFIANAGGPPFVIYLAPQQLDKLVFVGTSVIFFSVINAVKVVPFVLLGLFDTRNL 60
           ++GFTSF+++AGGPPF IY  P +L  ++F GT+VIFF+VINA+K++P+ +LG FD  NL
Sbjct: 142 IAGFTSFVSHAGGPPFQIYALPLKLPTILFAGTAVIFFAVINAIKLIPYTMLGEFDATNL 201

Query: 61  TTSLALLPLAPVGYWLGLKLLMKVDQVRFYQITIAALFVAGCKLLWD 107
           T S  LLPLAP+  +LG+K+   +    FY+IT   +F+   KL+ D
Sbjct: 202 TVSAVLLPLAPISMYLGVKIAKVISPQLFYKITYFGVFIVALKLIAD 248


>ref|YP_522849.1| hypothetical protein Rfer_1586 [Rhodoferax ferrireducens T118]
 gb|ABD69318.1| protein of unknown function DUF81 [Rhodoferax ferrireducens T118]
          Length = 251

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 71/107 (66%)

Query: 2   SGFTSFIANAGGPPFVIYLAPQQLDKLVFVGTSVIFFSVINAVKVVPFVLLGLFDTRNLT 61
           +GFTSFIA+AGGPP   Y+ P +L  L F  T   FF VIN  K VP+  LGL D RN+ 
Sbjct: 143 AGFTSFIAHAGGPPINAYVIPLRLSPLRFTATMAYFFFVINLAKWVPYAWLGLLDVRNMA 202

Query: 62  TSLALLPLAPVGYWLGLKLLMKVDQVRFYQITIAALFVAGCKLLWDA 108
           TSL LLP+AP+G W+G+ L  +++ V FY++    + + G KL+WDA
Sbjct: 203 TSLVLLPIAPIGVWIGVHLARRINPVLFYRLVYLGMLLTGTKLVWDA 249


>ref|ZP_08275074.1| putative integral membrane protein [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31443.1| putative integral membrane protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 254

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 73/114 (64%)

Query: 1   MSGFTSFIANAGGPPFVIYLAPQQLDKLVFVGTSVIFFSVINAVKVVPFVLLGLFDTRNL 60
           +SGFTSF+++AGGPP  IYL P+ LDK ++VGT  I F+ IN  K+VP+ LLG     NL
Sbjct: 141 LSGFTSFVSHAGGPPMAIYLLPKHLDKAIYVGTVTILFTTINYAKIVPYALLGQLSVDNL 200

Query: 61  TTSLALLPLAPVGYWLGLKLLMKVDQVRFYQITIAALFVAGCKLLWDAAGAYLG 114
            T+  L PLAP+G  LG  +  ++D   FY+I+   L + G KL WD    ++G
Sbjct: 201 ATAAVLSPLAPIGVKLGAWMHDRIDAKVFYRISYGFLLLTGLKLSWDGLRHWIG 254