BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0019.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774032.1| biopolymer transport transmembrane protein [... 400 e-110 ref|YP_001354583.1| MotA/TolQ/ExbB proton channel family protein... 372 e-101 ref|YP_001100901.1| biopolymer transport ExbB protein [Herminiim... 370 e-100 gb|EGW61758.1| MotA/TolQ/ExbB proton channel [Dechlorosoma suill... 253 2e-65 ref|ZP_00054804.2| COG0811: Biopolymer transport proteins [Magne... 238 8e-61 >ref|YP_003774032.1| biopolymer transport transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62124.1| biopolymer transport transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 231 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 193/227 (85%), Positives = 214/227 (94%), Gaps = 1/227 (0%) Query: 1 MEQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAP 60 MEQ +GFAHYWAQGDAVSH+VAY+LL+MS+ASWYYILSK W++WRIRRGSNALE FW+AP Sbjct: 1 MEQNIGFAHYWAQGDAVSHSVAYLLLIMSIASWYYILSKAWAAWRIRRGSNALERFWQAP 60 Query: 61 TLTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQN-TPSLNAATDPGELITRTLRREIN 119 TL DA A M+ +DSE+I+TP+A+R++EAA I ++Q TPSLNAATDPGELITRTLRREIN Sbjct: 61 TLADATAAMQRLDSEQIYTPMAERAAEAADIGTRQQGTPSLNAATDPGELITRTLRREIN 120 Query: 120 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIM 179 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHAL AVSASGTVQIDKVAGPVGEALIM Sbjct: 121 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIM 180 Query: 180 TALGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVG 226 TALGL+VAIPAVLAYNAFTR+NR+ LAELDGFAHDLHAYLTTGERVG Sbjct: 181 TALGLLVAIPAVLAYNAFTRINRVVLAELDGFAHDLHAYLTTGERVG 227 >ref|YP_001354583.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp. Marseille] gb|ABR90144.1| MotA/TolQ/ExbB proton channel family protein [Janthinobacterium sp. Marseille] Length = 230 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/226 (80%), Positives = 201/226 (88%), Gaps = 2/226 (0%) Query: 2 EQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAPT 61 +Q +G AHYWAQGDAVSH+VAYVLL+MS+ SWYYILSK WSSWRIR+ + AL+GFW+APT Sbjct: 7 DQGLGLAHYWAQGDAVSHSVAYVLLIMSILSWYYILSKAWSSWRIRKSAAALDGFWQAPT 66 Query: 62 LTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTPSLNAATDPGELITRTLRREINRV 121 LTDAIA +R DSE ++TPLA +S EAA I N SLNA TDPGELITRTLR+EINRV Sbjct: 67 LTDAIATIRRSDSENVYTPLAAQSVEAANIKPHAN--SLNANTDPGELITRTLRQEINRV 124 Query: 122 SARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIMTA 181 S+RLE GLTLLASVGSTAPF+GLFGTVWGIYHAL AVS+SGT+QIDKVAGPVGEALIMTA Sbjct: 125 SSRLETGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSSSGTIQIDKVAGPVGEALIMTA 184 Query: 182 LGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVGK 227 LGL VAIPAVLAYNAFTR+NR+TLAELD FAHDLHAYLTTG RVGK Sbjct: 185 LGLAVAIPAVLAYNAFTRVNRVTLAELDAFAHDLHAYLTTGARVGK 230 >ref|YP_001100901.1| biopolymer transport ExbB protein [Herminiimonas arsenicoxydans] emb|CAL62780.1| Putative biopolymer transport ExbB protein [Herminiimonas arsenicoxydans] Length = 230 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/226 (80%), Positives = 199/226 (88%), Gaps = 2/226 (0%) Query: 2 EQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSNALEGFWKAPT 61 EQ +G +HYWAQGDAVSHAVAY LL+MS+ SWYYILSK WS+WRIRR + ALE FW+APT Sbjct: 7 EQGLGLSHYWAQGDAVSHAVAYALLIMSILSWYYILSKGWSAWRIRRSAAALENFWQAPT 66 Query: 62 LTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTPSLNAATDPGELITRTLRREINRV 121 L DAIA +R DSE ++TPLA +S EAA I+ N SLNA TDPGELITRTLR+EINRV Sbjct: 67 LPDAIAAIRLTDSENVYTPLAAQSVEAANITPHAN--SLNANTDPGELITRTLRQEINRV 124 Query: 122 SARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIMTA 181 S+RLE GLTLLASVGSTAPF+GLFGTVWGIYHAL AVSASGTVQIDKVAGPVGEALIMTA Sbjct: 125 SSRLENGLTLLASVGSTAPFIGLFGTVWGIYHALVAVSASGTVQIDKVAGPVGEALIMTA 184 Query: 182 LGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVGK 227 LGL VAIPAVLAYNAFTR+NR+TLAELD FAHDLHAYLTTG RVGK Sbjct: 185 LGLAVAIPAVLAYNAFTRVNRITLAELDAFAHDLHAYLTTGTRVGK 230 >gb|EGW61758.1| MotA/TolQ/ExbB proton channel [Dechlorosoma suillum PS] Length = 239 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 131/226 (57%), Positives = 159/226 (70%), Gaps = 1/226 (0%) Query: 1 MEQTVGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRR-GSNALEGFWKA 59 M +G +H+WAQGD VSH+VA +LLL+SVASW I+ K + WR R S AL FW+A Sbjct: 1 MNTQLGLSHFWAQGDGVSHSVALILLLLSVASWCVIVGKFIAHWRASRTQSRALAAFWQA 60 Query: 60 PTLTDAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTPSLNAATDPGELITRTLRREIN 119 +L +A+ +R D+ I LA + AA + + A + E +TR LR+ I Sbjct: 61 DSLPEALEAIRREDASGILAGLALSGAHAAQAHEQHAARGIGAGVNASEFVTRCLRQSIV 120 Query: 120 RVSARLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIM 179 AR+E+GLT LASVGSTAPF+GLFGTVWGIYHAL +S S V +DKVAGPVGEALIM Sbjct: 121 TTQARIEQGLTFLASVGSTAPFIGLFGTVWGIYHALVGLSGSSQVVLDKVAGPVGEALIM 180 Query: 180 TALGLVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERV 225 TA GL VAIPAVLAYNAFTR NRL LA++DGFAHDLHAYLTTG R+ Sbjct: 181 TAAGLFVAIPAVLAYNAFTRANRLVLAQMDGFAHDLHAYLTTGVRL 226 >ref|ZP_00054804.2| COG0811: Biopolymer transport proteins [Magnetospirillum magnetotacticum MS-1] Length = 235 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 125/226 (55%), Positives = 150/226 (66%), Gaps = 1/226 (0%) Query: 5 VGFAHYWAQGDAVSHAVAYVLLLMSVASWYYILSKTWSSWRIRRGSN-ALEGFWKAPTLT 63 +G AH+W QGD VSH VA +L +SVASW I + + R+ R + ALE FW APTL Sbjct: 10 IGLAHFWEQGDIVSHTVAIILAFLSVASWSVIALRFVAQIRVNRSVDGALETFWSAPTLE 69 Query: 64 DAIAVMRTVDSEEIFTPLAQRSSEAAGISSKQNTPSLNAATDPGELITRTLRREINRVSA 123 +A+ M D I LA+ EAA I ++ + + E +TR +R + R A Sbjct: 70 EAVERMTRRDYSGILAGLARIGVEAARIHAQHEERGIGSGVSSSEFLTRAMRNYMVRSQA 129 Query: 124 RLERGLTLLASVGSTAPFVGLFGTVWGIYHALAAVSASGTVQIDKVAGPVGEALIMTALG 183 RLE GLT LASVGSTAPF+GLFGTVWGI+HAL +S + V +DKVAGPVGEAL+MTA G Sbjct: 130 RLESGLTFLASVGSTAPFIGLFGTVWGIFHALVGLSGATQVVLDKVAGPVGEALVMTAAG 189 Query: 184 LVVAIPAVLAYNAFTRLNRLTLAELDGFAHDLHAYLTTGERVGKGE 229 L VAIPAVLAYNA R NRL A LDGFAHDLHA+LTTG RV G Sbjct: 190 LFVAIPAVLAYNALNRANRLIGAYLDGFAHDLHAFLTTGARVAGGH 235