BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0007.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001478637.1| hypothetical protein Spro_2408 [Serratia pro... 105 3e-21 ref|ZP_07773648.1| protein of unknown function DUF1120 [Pseudomo... 98 8e-19 ref|YP_002875396.1| hypothetical protein PFLU5910 [Pseudomonas f... 98 8e-19 ref|YP_002870675.1| hypothetical protein PFLU1015 [Pseudomonas f... 91 1e-16 ref|ZP_07778250.1| protein of unknown function DUF1120 [Pseudomo... 86 2e-15 >ref|YP_001478637.1| hypothetical protein Spro_2408 [Serratia proteamaculans 568] gb|ABV41509.1| protein of unknown function DUF1120 [Serratia proteamaculans 568] Length = 250 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/222 (34%), Positives = 111/222 (50%), Gaps = 26/222 (11%) Query: 4 AAGVHAADTAELVVKGTIRPSACLASFPGNSVIDFGTIKSDPHLKERFKDLPSQRVDMRI 63 A+ V AAD+ +L V GTI P AC + G +D+GTIK+D + + LP + +D I Sbjct: 29 ASSVFAADSVDLKVIGTITPVACTPTLSGGGTVDYGTIKADTLKADDYTVLPVKSLDFAI 88 Query: 64 SCDGPTKIAVKAVDNREATREKD---------IP------GIDAGDN----FGLGLYRGK 104 +CDG K+AV A R T D IP G D+ + FGLGL K Sbjct: 89 TCDGNAKVAVNAFSGRMGTTVGDAEATNGASTIPAGITIFGQDSSTSTAQAFGLGLDGTK 148 Query: 105 SIGGYAVRF--GTAVADGQSVGILGRPNGSAAWRSSPLRG---LRQDGSQISFGAGN--T 157 IGGY RF A ADG +V + R + W ++ + + + Q S+ A T Sbjct: 149 KIGGYLTRFNNANAKADGVAVDTITRRGPTGTWLAAAQKTANLVSKTFLQPSWAATGTLT 208 Query: 158 PVAFSELVAGLDISAKLSRVAYQLLADDIQLDGSISIEMLYL 199 PVAF L L++ A +++ + + IQLDG ++E++YL Sbjct: 209 PVAFKTLATTLEVQAFINKASELDITKPIQLDGLATLELIYL 250 >ref|ZP_07773648.1| protein of unknown function DUF1120 [Pseudomonas fluorescens WH6] gb|EFQ65461.1| protein of unknown function DUF1120 [Pseudomonas fluorescens WH6] Length = 214 Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 1 LSAAAGVHAADTAELVVKGTIRPSACLASFPGNSVIDFGTIKSDPHLKERFKDLPSQRVD 60 L+ A+ V AA + +L V GT+ PSAC + V+D G I S L LP + Sbjct: 14 LAGASNVFAASSVDLSVTGTLTPSACTPALSNGGVVDHGKI-SVQDLDRLTTQLPDATLT 72 Query: 61 MRISCDGPTKIAVKAVDNREATREKDIPGIDAGDNFGLGLYR-GKSIGGYAVRFGTAVAD 119 + I+CD IA+KA+DNR T D G FGLGL G+ IGGY + A AD Sbjct: 73 LTINCDATALIAIKAMDNRSGTAAPDWTGPSPVSYFGLGLASGGEKIGGYRLGTSNATAD 132 Query: 120 GQSVGILGRPNG-------SAAWRSSPLRGLRQDGSQISFGAGNTPVAFSELVAGLDISA 172 G + ++ +G S++W+ + +R + +Q+ P+ A L IS Sbjct: 133 GVACAVIESTDGQTWFETWSSSWQPNWMRTVNGGSTQLP-----APLPLQAFKADLLIST 187 Query: 173 KLSRVAYQLLADDIQLDGSISIEMLYL 199 ++ ++ + +DI++DGS +++++YL Sbjct: 188 YIAPKSFLPITEDIRIDGSATLDIVYL 214 >ref|YP_002875396.1| hypothetical protein PFLU5910 [Pseudomonas fluorescens SBW25] emb|CAY53386.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 227 Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 6/204 (2%) Query: 1 LSAAAGVHAADTAELVVKGTIRPSACLASFPGNSVIDFGTIKSDPHLKERFKDLPSQRVD 60 L A+ G HA + AEL+V+GTI+P AC S G ++D+ TI + +F L ++ V Sbjct: 25 LVASIGAHATNVAELIVRGTIKPVACNLSLAGGGIVDYQTIPAASLSPTQFTSLAAKTVG 84 Query: 61 MRISC-DGPTKIAVKAVDNREATREKDI--PGIDAGDNFGLGLYRGKSIGGYAVRFGTAV 117 + ISC P + V D + A++ I G N+GLGL K GGY+V Sbjct: 85 LSISCGQTPAQFRVALSDLQSASKVTGILGTGFTEAQNYGLGLANSKRTGGYSVTLKNLQ 144 Query: 118 ADGQSVGILGRPNGSAAWRSSPLRGLRQDGSQISFGAGNT--PVAFSELVAGLDISAKLS 175 + ++ + R + AAW++S + + Q +Q S+ +G + P + + L L++ A ++ Sbjct: 145 SSSGTLSPIMRSSSGAAWQNSDGK-VAQSPAQYSWRSGTSVVPASVTSLTGTLEVKAVIN 203 Query: 176 RVAYQLLADDIQLDGSISIEMLYL 199 R L D+ LDG S+ + Y+ Sbjct: 204 RTQDLDLTRDVTLDGRTSLSVDYI 227 >ref|YP_002870675.1| hypothetical protein PFLU1015 [Pseudomonas fluorescens SBW25] emb|CAY47279.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 207 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 9/193 (4%) Query: 9 AADTAELVVKGTIRPSACLASFPGNSVIDFGTIKSDPHLKERFKDLPSQRVDMRISCDGP 68 AA + +L V G I PSAC S G VID G + + + L Q + + + CDGP Sbjct: 22 AASSTDLAVTGLIIPSACSPSLSGGGVIDHGKVAARDLNPDTHTSLQRQVMRLNVRCDGP 81 Query: 69 TKIAVKAVDNREATREKDIPGIDAGDNF-GLGLY-RGKSIGGYAVRFGTAVADGQSVGIL 126 T ++ +DNRE T D F GLG+ + +G ++R TAVAD ++V + Sbjct: 82 TLFSLSTLDNREGTSAIQ-------DRFHGLGMTANDEKLGSASLRLSTAVADTEAVRTI 134 Query: 127 GRPNGSAAWRSSPLRGLRQDGSQISFGAGNTPVAFSELVAGLDISAKLSRVAYQLLADDI 186 +G A W G + S TP+A EL A + ++ ++R L D++ Sbjct: 135 VSTDGGATWIEGTYLGHTAMTAVASATGSLTPIAVQELDADVRLNTMIARSDSLTLVDEV 194 Query: 187 QLDGSISIEMLYL 199 LDG +++++ YL Sbjct: 195 PLDGHVTVQLRYL 207 >ref|ZP_07778250.1| protein of unknown function DUF1120 [Pseudomonas fluorescens WH6] gb|EFQ60424.1| protein of unknown function DUF1120 [Pseudomonas fluorescens WH6] Length = 218 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 10/207 (4%) Query: 1 LSAAAGVHAADTAELVVKGTIRPSACLASFPGNSVIDFGTIKSDPHLKERFKDLPSQRVD 60 L+ A HA+ +AEL+V+GTI+P+AC S G +I++G I S F L + Sbjct: 14 LATALSAHASTSAELIVRGTIKPAACNLSMSGGGIINYGDIPSGQLSATAFNPLAERTAP 73 Query: 61 MRISC-DGPTKIAVKAVDNREATREKDI-----PGIDAGDNFGLGLYRGKSIGGYAVRFG 114 + I+C P K +K VD + A++ I G N+GLG+ G+ GG+AV Sbjct: 74 LSINCGTTPAKFGLKFVDLQAASKVPGILSALGSGYTEAHNYGLGIASGRKTGGFAVTLR 133 Query: 115 TAVADGQSVGILGRPNGSAAWRSSPLRGLRQDGSQIS--FGAGNTPVAFSELVAGLDISA 172 + + + R G+ AW+SS + + Q +Q S + TPV+ +L + + A Sbjct: 134 DLRSSTTPLYPILR-VGAGAWQSSDGK-VAQSPTQYSWRYTTALTPVSIPQLTGTIAVRA 191 Query: 173 KLSRVAYQLLADDIQLDGSISIEMLYL 199 ++R L+ DI LDG ++E+ Y+ Sbjct: 192 VINRGRDLDLSRDIILDGRATLELSYI 218