BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0002.p (140 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001100909.1| hypothetical protein HEAR2666 [Herminiimonas... 223 7e-57 ref|YP_003774018.1| inner membrane protein [Herbaspirillum serop... 222 1e-56 ref|YP_001354590.1| hypothetical protein mma_2900 [Janthinobacte... 216 6e-55 ref|YP_004754509.1| hypothetical protein CFU_3862 [Collimonas fu... 211 3e-53 ref|YP_001900534.1| hypothetical protein Rpic_2979 [Ralstonia pi... 209 1e-52 >ref|YP_001100909.1| hypothetical protein HEAR2666 [Herminiimonas arsenicoxydans] emb|CAL62788.1| Conserved hypothetical protein; putative membrane protein [Herminiimonas arsenicoxydans] Length = 139 Score = 223 bits (568), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 108/140 (77%), Positives = 123/140 (87%), Gaps = 1/140 (0%) Query: 1 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETETVAKERLLGMARRLYRFTTVLAIPAI 60 MLWIKALHIVF+ SWFAGLFYLPRIFVNLA ET+T + RLL MAR+LYRFTT+LA+PA+ Sbjct: 1 MLWIKALHIVFVISWFAGLFYLPRIFVNLAMETDTTSTTRLLLMARKLYRFTTILALPAV 60 Query: 61 ALGLYLYLVIGIGKGPGNGWMHAKLALVILVIGYHHACGSLLKKFENGKNQRSHKWFRWF 120 GL L L G G+GPGNGW+HAKL LV+++IGYHHACGSLLKKFE G N+RSH W+RWF Sbjct: 61 VFGLAL-LSYGFGQGPGNGWLHAKLVLVVVLIGYHHACGSLLKKFERGANKRSHTWYRWF 119 Query: 121 NEVPVLLLLAIVILVVVKPF 140 NEVPV+LLLAIVILVVVKPF Sbjct: 120 NEVPVVLLLAIVILVVVKPF 139 >ref|YP_003774018.1| inner membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62110.1| inner membrane protein [Herbaspirillum seropedicae SmR1] Length = 141 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 112/141 (79%), Positives = 126/141 (89%), Gaps = 1/141 (0%) Query: 1 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETETVAKERLLGMARRLYRFTTVLAIPAI 60 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETE ++ERLLGMARRLYRFT ++++ A+ Sbjct: 1 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETEVASRERLLGMARRLYRFTGMISLVAL 60 Query: 61 ALGLYLY-LVIGIGKGPGNGWMHAKLALVILVIGYHHACGSLLKKFENGKNQRSHKWFRW 119 ALG++L L KGPGNGW+HAKL LV+LVIGY HACGSLLKKFE+GKN RSH W+RW Sbjct: 61 ALGVWLLVLTWQFWKGPGNGWLHAKLFLVVLVIGYQHACGSLLKKFEHGKNVRSHVWYRW 120 Query: 120 FNEVPVLLLLAIVILVVVKPF 140 FNEVPVLL+LAIVILVVVKPF Sbjct: 121 FNEVPVLLMLAIVILVVVKPF 141 >ref|YP_001354590.1| hypothetical protein mma_2900 [Janthinobacterium sp. Marseille] gb|ABR90127.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 139 Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 106/140 (75%), Positives = 121/140 (86%), Gaps = 1/140 (0%) Query: 1 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETETVAKERLLGMARRLYRFTTVLAIPAI 60 MLWIK+LHIVF+ SWFAGLFYLPRIFVNLA ET+ A RLL MAR+LYRFTT+LA+PA+ Sbjct: 1 MLWIKSLHIVFVISWFAGLFYLPRIFVNLAMETDATATTRLLLMARKLYRFTTILAVPAV 60 Query: 61 ALGLYLYLVIGIGKGPGNGWMHAKLALVILVIGYHHACGSLLKKFENGKNQRSHKWFRWF 120 G+ L L G G+GPGNGW+HAK+ LVILVIGY HAC SLLKKFE+G N+RSH WFRWF Sbjct: 61 LFGVGL-LFYGFGQGPGNGWLHAKVVLVILVIGYQHACNSLLKKFEHGVNKRSHTWFRWF 119 Query: 121 NEVPVLLLLAIVILVVVKPF 140 NEVP++LLLAIVILVVVKPF Sbjct: 120 NEVPIVLLLAIVILVVVKPF 139 >ref|YP_004754509.1| hypothetical protein CFU_3862 [Collimonas fungivorans Ter331] gb|AEK63686.1| Hypothetical membrane protein [Collimonas fungivorans Ter331] Length = 140 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 117/140 (83%), Positives = 125/140 (89%) Query: 1 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETETVAKERLLGMARRLYRFTTVLAIPAI 60 MLWIK+LHIVFIASWFAGLFYLPRI VNLAQET+T A RLL MAR+LYRFTT+LA+PAI Sbjct: 1 MLWIKSLHIVFIASWFAGLFYLPRILVNLAQETDTAATTRLLLMARKLYRFTTMLALPAI 60 Query: 61 ALGLYLYLVIGIGKGPGNGWMHAKLALVILVIGYHHACGSLLKKFENGKNQRSHKWFRWF 120 G +L+L GIGKGPGNGW+HAKL LVILVIGYHHACGSLLKKFENG N RSH W RWF Sbjct: 61 VFGAWLWLGYGIGKGPGNGWLHAKLFLVILVIGYHHACGSLLKKFENGVNTRSHVWLRWF 120 Query: 121 NEVPVLLLLAIVILVVVKPF 140 NEVPVLLLLAIVILVVVKPF Sbjct: 121 NEVPVLLLLAIVILVVVKPF 140 >ref|YP_001900534.1| hypothetical protein Rpic_2979 [Ralstonia pickettii 12J] ref|YP_002982512.1| hypothetical protein Rpic12D_2569 [Ralstonia pickettii 12D] ref|ZP_07676021.1| membrane protein [Ralstonia sp. 5_7_47FAA] gb|ACD28102.1| conserved hypothetical protein [Ralstonia pickettii 12J] gb|ACS63840.1| conserved hypothetical protein [Ralstonia pickettii 12D] gb|EFP65359.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 140 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 106/140 (75%), Positives = 119/140 (85%) Query: 1 MLWIKALHIVFIASWFAGLFYLPRIFVNLAQETETVAKERLLGMARRLYRFTTVLAIPAI 60 MLW+KA HIVFIASWFAGLFYLPRIFVNLA ETE A RLL MAR+L+RFTT+LAI AI Sbjct: 1 MLWVKAFHIVFIASWFAGLFYLPRIFVNLAMETERAAITRLLIMARKLFRFTTILAIVAI 60 Query: 61 ALGLYLYLVIGIGKGPGNGWMHAKLALVILVIGYHHACGSLLKKFENGKNQRSHKWFRWF 120 LGL+L+L IG P NGWMHAKLALV++ IGYHH CG LL+KFE G N+RSHK++RWF Sbjct: 61 LLGLWLFLGYRIGLYPPNGWMHAKLALVLVTIGYHHGCGVLLRKFEAGANKRSHKFYRWF 120 Query: 121 NEVPVLLLLAIVILVVVKPF 140 NE+PVLLLLAI ILVVVKPF Sbjct: 121 NELPVLLLLAITILVVVKPF 140