BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0190.p (416 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004685377.1| ABC transporter permease [Cupriavidus necato... 334 1e-89 ref|YP_726022.1| ABC-type transporter, permease component [Ralst... 333 4e-89 ref|YP_584008.1| ABC transporter permease [Cupriavidus metallidu... 332 1e-88 ref|YP_002005479.1| branched-chain amino acid ABC transporter [C... 331 2e-88 ref|YP_295615.1| inner-membrane translocator [Ralstonia eutropha... 330 4e-88 >ref|YP_004685377.1| ABC transporter permease [Cupriavidus necator N-1] gb|AEI76896.1| ABC transport system permease protein [Cupriavidus necator N-1] Length = 437 Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 185/405 (45%), Positives = 269/405 (66%), Gaps = 17/405 (4%) Query: 21 LALLLLPMVYAKSSALSFLSQVAIISVFALSYNILLGQTGLLSFGHAVYAGLGGYCAIHL 80 LA+L+LP+++ A++ +SQ+ I+ +FALSYN+LLGQTG+LSFGHAVY+GLG + A+H+ Sbjct: 36 LAMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHV 95 Query: 81 LNKTGADGLGLGLLALPLIGGLGGAIAGFVFGYISTRRAGTTYAMITLGIAEMLVALALM 140 LN GA + L + LPL+GGL GA G +FGY++T+++GTT+AMIT+GI EM+ A +LM Sbjct: 96 LNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAMITMGIGEMVFASSLM 155 Query: 141 LPGMSGGEAGMTTNRMLNHAILGINLGSDTQMYYFAWGWMFIATALMYAFTKTPLGRLAN 200 P GGE G++TNR++ LGI G Q+YY W ++ MYA+T+TPLGR+AN Sbjct: 156 FPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLLSMVAMYAWTQTPLGRIAN 215 Query: 201 AVRDNPERVAFIGFNPQKIRWTVMVIAGFFAGIAGGLSAVNYELVTIDNLGVAQSGMVLV 260 AVRDNPERV FIG+N Q++R+ V++++ FFAGIAG L A+N+E+V+ +N+ +SG VL+ Sbjct: 216 AVRDNPERVEFIGYNTQRVRYLVLILSAFFAGIAGALGAINFEIVSAENVSAVRSGGVLL 275 Query: 261 ATYLGGVGYFLGPVAGALIYVLFLTVISTITKAWLLYFGVLFITVVMFTPEGLLG-LLKQ 319 A ++GG G F GP+ GA+++VLF +S +TKAWLLY G+ F+ +VMF P GL LL Q Sbjct: 276 AVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKAWLLYLGLFFVLMVMFVPGGLASLLLMQ 335 Query: 320 VDGASRFTLRRFL---------GVLLSCACFVLVVEILYAYQDSADTGQAISLSGLLGLG 370 + + L L GV+L A +L VE++Y Q + G A+SL G +G Sbjct: 336 MPLLGKGKLGPMLPSYARAGGAGVVLLLAM-ILTVELVYKVQVDSANGTAMSLFG-VGFD 393 Query: 371 KQAYLPIGLLALTYVVAATYKRCTVAQANVR---LGTKQELAGEK 412 + P + A+ + AA +A A VR + E+AG + Sbjct: 394 AATWTPWLVAAVLW--AAGLFAWRLAAARVRGAWDKVQMEIAGGR 436 >ref|YP_726022.1| ABC-type transporter, permease component [Ralstonia eutropha H16] emb|CAJ92654.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 437 Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 178/378 (47%), Positives = 255/378 (67%), Gaps = 14/378 (3%) Query: 9 AGWIKPVLILLPLALLLLPMVYAKSSALSFLSQVAIISVFALSYNILLGQTGLLSFGHAV 68 A WI + L L +L+LP+++ A++ +SQ+ I+ +FALSYN+LLGQTG+LSFGHAV Sbjct: 26 ARWI--IWSLTVLVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAV 83 Query: 69 YAGLGGYCAIHLLNKTGADGLGLGLLALPLIGGLGGAIAGFVFGYISTRRAGTTYAMITL 128 Y+GLG + A+H+LN GA + L + LPL+GGL GA G +FGY++T+++GTT+AMIT+ Sbjct: 84 YSGLGAFIAVHVLNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAMITM 143 Query: 129 GIAEMLVALALMLPGMSGGEAGMTTNRMLNHAILGINLGSDTQMYYFAWGWMFIATALMY 188 GI EM+ A +LM P GGE G++TNR++ LGI G Q+YY W ++ MY Sbjct: 144 GIGEMVFASSLMFPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLLSMVAMY 203 Query: 189 AFTKTPLGRLANAVRDNPERVAFIGFNPQKIRWTVMVIAGFFAGIAGGLSAVNYELVTID 248 A+T+TPLGR+ANAVRDNPERV FIG+N Q++R+ V++++ FFAGIAG L A+N+E+V+ + Sbjct: 204 AWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGIAGALGAINFEIVSAE 263 Query: 249 NLGVAQSGMVLVATYLGGVGYFLGPVAGALIYVLFLTVISTITKAWLLYFGVLFITVVMF 308 N+ +SG VL+A ++GG G F GP+ GA+++VLF +S +TKAWLLY G+ F+ +VMF Sbjct: 264 NVSAVRSGGVLLAVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKAWLLYLGLFFVLMVMF 323 Query: 309 TPEGLLG-LLKQVDGASRFTLRRFL---------GVLLSCACFVLVVEILYAYQDSADTG 358 P GL LL QV + L R L V+L A +L VE++Y Q + G Sbjct: 324 VPGGLASLLLMQVPLLGKGKLGRMLPSYARAGGAAVVLLLAM-ILTVELVYKVQVDSANG 382 Query: 359 QAISLSGLLGLGKQAYLP 376 +SL G +G + P Sbjct: 383 TTMSLFG-VGFDAATWTP 399 >ref|YP_584008.1| ABC transporter permease [Cupriavidus metallidurans CH34] gb|ABF08739.1| ABC-type transporter, permease component [Cupriavidus metallidurans CH34] Length = 437 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 177/402 (44%), Positives = 258/402 (64%), Gaps = 13/402 (3%) Query: 23 LLLLPMVYAKSSALSFLSQVAIISVFALSYNILLGQTGLLSFGHAVYAGLGGYCAIHLLN 82 +L++P++++ A++ LSQ+ I+ +FALSYN+LLGQTG+LSFGHAVY+GLG + A+H+LN Sbjct: 39 MLVMPLIFSGGFAVTLLSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHVLN 98 Query: 83 KTGADGLGLGLLALPLIGGLGGAIAGFVFGYISTRRAGTTYAMITLGIAEMLVALALMLP 142 GA + L + LPL+GGL GA G +FGY++T+++GTT+AMIT+GI EM+ A +LM P Sbjct: 99 MIGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAMITMGIGEMVFASSLMFP 158 Query: 143 GMSGGEAGMTTNRMLNHAILGINLGSDTQMYYFAWGWMFIATALMYAFTKTPLGRLANAV 202 GGE G++TNR++ LGI G Q+YY W ++ MYA+T TPLGR+ANAV Sbjct: 159 DFFGGEGGISTNRVVGEPFLGITYGHGRQVYYLIAAWCLLSMVAMYAWTHTPLGRIANAV 218 Query: 203 RDNPERVAFIGFNPQKIRWTVMVIAGFFAGIAGGLSAVNYELVTIDNLGVAQSGMVLVAT 262 RDNPERV FIG+N Q++R+ V++++ FFAGIAG LSA+N+E+V+ +N+ +SG VL+A Sbjct: 219 RDNPERVEFIGYNTQRVRYLVLILSAFFAGIAGALSAINFEIVSAENVSAVRSGGVLLAA 278 Query: 263 YLGGVGYFLGPVAGALIYVLFLTVISTITKAWLLYFGVLFITVVMFTPEGLLGLL----- 317 ++GG G F GPV GA+++ LF +S +TKAWLLY G+ F+ +VMF P G+ LL Sbjct: 279 FIGGAGVFFGPVIGAIVFTLFAVALSDLTKAWLLYLGLFFVMMVMFVPGGIASLLMMQMP 338 Query: 318 ----KQVDGASRFTLRRFLGVLLSCACFVLVVEILYAYQDSADTGQAISLSGLLGLGKQA 373 KQ + R + + A +L VE++Y Q + G +SL G +G Sbjct: 339 LVAKKQFGRMLPYYGRAAVAGAVLLAALILTVEMVYKVQVDSANGTEMSLVG-IGFDAGT 397 Query: 374 YLPIGLLALTYVVAATYKRCTVAQANVRLGTKQELAGEKHGH 415 + P + A + + R Q +L Q G GH Sbjct: 398 FAPWIVAAALWALGYAAWRWAAGQVRAQLDAIQTQTG---GH 436 >ref|YP_002005479.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] emb|CAQ69412.1| putative ABC-type branched-chain amino acid transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 437 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 183/415 (44%), Positives = 270/415 (65%), Gaps = 15/415 (3%) Query: 9 AGWIKPVLILLPLALLLLPMVYAKSSALSFLSQVAIISVFALSYNILLGQTGLLSFGHAV 68 A WI + L L +L+LP+++ A++ +SQ+ I+ +FALSYN+LLGQTG+LSFGHAV Sbjct: 26 ARWI--IWSLTVLVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAV 83 Query: 69 YAGLGGYCAIHLLNKTGADGLGLGLLALPLIGGLGGAIAGFVFGYISTRRAGTTYAMITL 128 Y+GLG + A+H+LN GA + L + LPL+GGL GA G +FGY++T++AGTT+AMIT+ Sbjct: 84 YSGLGAFIAVHVLNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKAGTTFAMITM 143 Query: 129 GIAEMLVALALMLPGMSGGEAGMTTNRMLNHAILGINLGSDTQMYYFAWGWMFIATALMY 188 GI EM+ A +LM P GGE G++TNR++ LGI G Q+YY W ++ MY Sbjct: 144 GIGEMVFASSLMFPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLLSMVAMY 203 Query: 189 AFTKTPLGRLANAVRDNPERVAFIGFNPQKIRWTVMVIAGFFAGIAGGLSAVNYELVTID 248 A+T+TPLGR+ANAVRDNPERV FIG+N Q++R+ V++++ FFAGI+G L+A+N+E+V+ + Sbjct: 204 AWTQTPLGRIANAVRDNPERVEFIGYNTQRVRYLVLILSAFFAGISGALAAINFEIVSAE 263 Query: 249 NLGVAQSGMVLVATYLGGVGYFLGPVAGALIYVLFLTVISTITKAWLLYFGVLFITVVMF 308 N+ +SG VL+A ++GG G F GP+ GA+++VLF +S +TKAWLLY G+ F+ +VMF Sbjct: 264 NVSAVRSGGVLLAVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKAWLLYLGLFFVLMVMF 323 Query: 309 TPEGLLGLLKQVDGAS-RFTLRRFL---------GVLLSCACFVLVVEILYAYQDSADTG 358 P GL LL + L R L GV+L A ++ +E++Y Q + G Sbjct: 324 VPGGLASLLLMQLPLLGKRKLGRMLPYYARAGGAGVVLLLAM-IVTIELVYKVQVDSANG 382 Query: 359 QAISLSGLLGLGKQAYLPIGLLALTYVVAATYKRCTVAQANVRLGTKQ-ELAGEK 412 A+ L G +G+ ++P A + V R V + + Q E+AG + Sbjct: 383 TAMKLFG-IGVDAATWMPWLAAAALWAVGLAAWRLAVRASRAQWDKVQAEIAGGR 436 >ref|YP_295615.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ60771.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ralstonia eutropha JMP134] Length = 439 Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 165/355 (46%), Positives = 248/355 (69%), Gaps = 9/355 (2%) Query: 21 LALLLLPMVYAKSSALSFLSQVAIISVFALSYNILLGQTGLLSFGHAVYAGLGGYCAIHL 80 L +L+LP+++ A++ +SQ+ I+ +FALSYN+LLGQTG+LSFGHAVY+GLG + A+H+ Sbjct: 38 LVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHV 97 Query: 81 LNKTGADGLGLGLLALPLIGGLGGAIAGFVFGYISTRRAGTTYAMITLGIAEMLVALALM 140 LN GA + L + LPL+GGL GA G +FGY++T+++GTT+AMIT+GI EM+ A +LM Sbjct: 98 LNMLGAGKVWLPVSMLPLVGGLAGAFFGVLFGYVTTKKSGTTFAMITMGIGEMVFASSLM 157 Query: 141 LPGMSGGEAGMTTNRMLNHAILGINLGSDTQMYYFAWGWMFIATALMYAFTKTPLGRLAN 200 P GGE G++TNR++ LGI G Q+YY W ++ MYA+T+TPLGR+AN Sbjct: 158 FPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLVSMVAMYAWTQTPLGRIAN 217 Query: 201 AVRDNPERVAFIGFNPQKIRWTVMVIAGFFAGIAGGLSAVNYELVTIDNLGVAQSGMVLV 260 AVRDNPERV FIG+N Q++R+ V++++ FFAGI+G LSA+N+E+V+ +N+ +SG VL+ Sbjct: 218 AVRDNPERVEFIGYNTQRVRYLVLILSAFFAGISGALSAINFEIVSAENVSAVRSGGVLL 277 Query: 261 ATYLGGVGYFLGPVAGALIYVLFLTVISTITKAWLLYFGVLFITVVMFTPEGLLG-LLKQ 319 A ++GG G F GP+ GA++++LF +S +TKAWLLY G+ F+ +VMF P G+ LL Q Sbjct: 278 AAFIGGAGVFFGPIIGAVVFMLFAVALSDLTKAWLLYLGLFFVLMVMFVPGGIASLLLMQ 337 Query: 320 VDGASRFTLRRFL--------GVLLSCACFVLVVEILYAYQDSADTGQAISLSGL 366 + ++ ++ L ++ A +L VE++Y Q + G +SL G+ Sbjct: 338 MPLVAKGKFKQMLPSYGRAAAAGVVLLAAMILTVELVYKVQVDSANGTDMSLFGI 392