BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0189.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_584009.1| HAAT family ABC transporter permease [Cupriavid... 374 e-101 ref|YP_002005478.1| branched-chain amino acid ABC transporter [C... 370 e-100 ref|YP_726021.1| ABC transporter permease [Ralstonia eutropha H1... 368 e-100 ref|YP_295614.1| inner-membrane translocator [Ralstonia eutropha... 349 3e-94 ref|YP_002981453.1| inner-membrane translocator [Ralstonia picke... 348 8e-94 >ref|YP_584009.1| HAAT family ABC transporter permease [Cupriavidus metallidurans CH34] gb|ABF08740.1| ABC-type transporter, permease component: HAAT family [Cupriavidus metallidurans CH34] Length = 323 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 202/315 (64%), Positives = 242/315 (76%) Query: 1 VSTFIITSLNALSFGLLLFLLSAGLTLIFSMMGVLNFAHASFYMLGAYVAYTFGAKVGFF 60 V F+I+ LN +S+GLLLF+LS+GLTLIFSMMGVLNFAHASFYMLGAY AYT KVGF+ Sbjct: 9 VEFFVISLLNGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTIATKVGFW 68 Query: 61 PALILAPIAMGAVGMLVERFGLRKVHMHGHVAELLFTFGLAQIIEELVHLIWGRAPVSYP 120 PALI AP+ + G LVERFGLR VH GHVAELLFTFGLA +IEE V L+WG A V Y Sbjct: 69 PALIFAPLLVAGAGALVERFGLRTVHKFGHVAELLFTFGLAYLIEEGVKLVWGLAAVPYR 128 Query: 121 MPDILSGSLFTVMGAPFPAYRAFIMCVAVGVLALLYFTITRTRVGLIIQAALTHPTMAEA 180 +P++L G LFTV + FP YRAF+M V++G+L +Y +TRTR+GL+IQAALTHP M EA Sbjct: 129 IPEVLDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEA 188 Query: 181 LGHNVPRIFMSVFGVGVGLAALAGAVGAPAAVTEPAMAHAVGSIVFVIIVLGGIGSLAGA 240 LGHNVPR+FM VFG G LA LAG +G A VTEP+MA AVGSIVFV+ V+GG+GSL GA Sbjct: 189 LGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVTEPSMAAAVGSIVFVVAVVGGMGSLVGA 248 Query: 241 FAASILIGFIQTFAVLVDASPYQLISSLGNDSLSNLMNIELFKITVAQLGPVLPFFVMVA 300 F ASILIG +QTFAV +DAS L+ SLG L+K+TVAQ+ PVLP+ +MV Sbjct: 249 FIASILIGVLQTFAVTIDASMAGLLGSLGMTVTDATPLSSLWKLTVAQVAPVLPYVLMVV 308 Query: 301 VLVLRPRGMFGKRES 315 +L+ RPRG+ G RES Sbjct: 309 MLIFRPRGLMGTRES 323 >ref|YP_002005478.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] emb|CAQ69411.1| putative ABC-type branched-chain amino acid transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 315 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 199/312 (63%), Positives = 242/312 (77%) Query: 4 FIITSLNALSFGLLLFLLSAGLTLIFSMMGVLNFAHASFYMLGAYVAYTFGAKVGFFPAL 63 F+I+ LN +S+GLLLF+LS+GLTLIFSMMGVLNFAHASFYMLGAY AYT +K+GF+PAL Sbjct: 4 FVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTIASKIGFWPAL 63 Query: 64 ILAPIAMGAVGMLVERFGLRKVHMHGHVAELLFTFGLAQIIEELVHLIWGRAPVSYPMPD 123 I AP+ + G LVERFGLR VH +GHVAELLFTFGLA +IEE V L+WG A V Y +P Sbjct: 64 IFAPLLVAGAGALVERFGLRTVHKYGHVAELLFTFGLAYLIEEGVKLVWGLAAVPYRIPA 123 Query: 124 ILSGSLFTVMGAPFPAYRAFIMCVAVGVLALLYFTITRTRVGLIIQAALTHPTMAEALGH 183 L G LFTV + FP YRAF+M V++G+L +Y +TRTR+GL+IQAALTHP M EALGH Sbjct: 124 ELDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEALGH 183 Query: 184 NVPRIFMSVFGVGVGLAALAGAVGAPAAVTEPAMAHAVGSIVFVIIVLGGIGSLAGAFAA 243 NVPR+FM VFG G LA LAG +G A VTEP+MA AVGSIVFV+ V+GG+GSL GAF A Sbjct: 184 NVPRVFMMVFGGGAALAGLAGVIGGNAFVTEPSMAAAVGSIVFVVAVVGGMGSLVGAFIA 243 Query: 244 SILIGFIQTFAVLVDASPYQLISSLGNDSLSNLMNIELFKITVAQLGPVLPFFVMVAVLV 303 SILIG +QTFAV +DAS L++SLG L+K+TVAQ+ PVLP+ ++V +L+ Sbjct: 244 SILIGVLQTFAVTIDASLAGLMTSLGLAVSQTTPFYSLWKLTVAQVAPVLPYLLLVVMLI 303 Query: 304 LRPRGMFGKRES 315 RPRG+ G RES Sbjct: 304 FRPRGLMGTRES 315 >ref|YP_726021.1| ABC transporter permease [Ralstonia eutropha H16] ref|YP_004685376.1| HAAT family ABC transporter permease [Cupriavidus necator N-1] emb|CAJ92653.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] gb|AEI76895.1| ABC transport system permease protein HAAT family [Cupriavidus necator N-1] Length = 315 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 199/312 (63%), Positives = 242/312 (77%) Query: 4 FIITSLNALSFGLLLFLLSAGLTLIFSMMGVLNFAHASFYMLGAYVAYTFGAKVGFFPAL 63 F+I+ LN +S+GLLLF+LS+GLTLIFSMMGVLNFAHASFYMLGAY AYT +KVGF+PAL Sbjct: 4 FVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTIASKVGFWPAL 63 Query: 64 ILAPIAMGAVGMLVERFGLRKVHMHGHVAELLFTFGLAQIIEELVHLIWGRAPVSYPMPD 123 I AP+ + G LVERFGLR VH +GHVAELLFTFGLA ++EE V L+WG A V Y +P Sbjct: 64 IFAPLLVAGAGALVERFGLRTVHKYGHVAELLFTFGLAYLMEEGVKLVWGLAAVPYRIPA 123 Query: 124 ILSGSLFTVMGAPFPAYRAFIMCVAVGVLALLYFTITRTRVGLIIQAALTHPTMAEALGH 183 L G LFTV + FP YRAF+M V++G+L +Y +TRTR+GL+IQAALTHP M EALGH Sbjct: 124 ELDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEALGH 183 Query: 184 NVPRIFMSVFGVGVGLAALAGAVGAPAAVTEPAMAHAVGSIVFVIIVLGGIGSLAGAFAA 243 NVPR+FM VFG G LA LAG +G A VTEP+MA AVGSIVFV+ V+GG+GSL GAF A Sbjct: 184 NVPRVFMMVFGGGAALAGLAGVIGGNAFVTEPSMAAAVGSIVFVVAVVGGMGSLVGAFIA 243 Query: 244 SILIGFIQTFAVLVDASPYQLISSLGNDSLSNLMNIELFKITVAQLGPVLPFFVMVAVLV 303 SILIG +QTFAV +DAS L++SLG L+K+TVAQ+ PVLP+ ++V +L+ Sbjct: 244 SILIGVLQTFAVTIDASLAGLMTSLGLAVSEATPFYSLWKLTVAQVAPVLPYLLLVVMLI 303 Query: 304 LRPRGMFGKRES 315 RPRG+ G RES Sbjct: 304 FRPRGLMGTRES 315 >ref|YP_295614.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ60770.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Ralstonia eutropha JMP134] Length = 342 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 200/315 (63%), Positives = 243/315 (77%) Query: 1 VSTFIITSLNALSFGLLLFLLSAGLTLIFSMMGVLNFAHASFYMLGAYVAYTFGAKVGFF 60 V F+I+ LN +S+GLLLF+LS+GLTLIFSMMGVLNFAHASFYMLGAY AYT +K+GF+ Sbjct: 28 VEFFVISLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYTVASKIGFW 87 Query: 61 PALILAPIAMGAVGMLVERFGLRKVHMHGHVAELLFTFGLAQIIEELVHLIWGRAPVSYP 120 PALILAP+ + G LVERFGLR VH +GHVAELLFTFGLA +IEE V L+WG A V Y Sbjct: 88 PALILAPLLVAFAGALVERFGLRAVHKYGHVAELLFTFGLAYLIEEGVKLVWGLAAVPYR 147 Query: 121 MPDILSGSLFTVMGAPFPAYRAFIMCVAVGVLALLYFTITRTRVGLIIQAALTHPTMAEA 180 +P L G LFTV + FP YRAF+M V++G+L +Y +TRTR+GL+IQAALTHP M EA Sbjct: 148 IPAELDGPLFTVFTSSFPKYRAFMMLVSLGMLVAIYLVLTRTRIGLVIQAALTHPEMVEA 207 Query: 181 LGHNVPRIFMSVFGVGVGLAALAGAVGAPAAVTEPAMAHAVGSIVFVIIVLGGIGSLAGA 240 LGHNVPR+FM VFG G LA LAG +G A VTEP+MA AVGSIVFV+ V+GG+GSL GA Sbjct: 208 LGHNVPRVFMMVFGGGAALAGLAGVIGGNAFVTEPSMAAAVGSIVFVVAVVGGMGSLVGA 267 Query: 241 FAASILIGFIQTFAVLVDASPYQLISSLGNDSLSNLMNIELFKITVAQLGPVLPFFVMVA 300 F ASILIG +QTFAV +DAS L +S+G L+K+TVAQ+ PVLP+ ++V Sbjct: 268 FIASILIGVLQTFAVTIDASLAGLFNSIGLAVSDATPFYSLWKLTVAQVAPVLPYLLLVL 327 Query: 301 VLVLRPRGMFGKRES 315 +L+ RPRG+ G RES Sbjct: 328 MLIFRPRGLMGTRES 342 >ref|YP_002981453.1| inner-membrane translocator [Ralstonia pickettii 12D] gb|ACS62781.1| inner-membrane translocator [Ralstonia pickettii 12D] Length = 330 Score = 348 bits (892), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 189/315 (60%), Positives = 240/315 (76%) Query: 1 VSTFIITSLNALSFGLLLFLLSAGLTLIFSMMGVLNFAHASFYMLGAYVAYTFGAKVGFF 60 V +I LN +S+GLLLF+LS+GLTLIFSMMGVLNFAHASFYMLGAY AY +GF+ Sbjct: 16 VEFLVINLLNGISYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAYVVSGYLGFW 75 Query: 61 PALILAPIAMGAVGMLVERFGLRKVHMHGHVAELLFTFGLAQIIEELVHLIWGRAPVSYP 120 PALI+AP+ +GA+G +VERFGLR VH +GHVAELLFTFGLA +IEE V L+WG V Y Sbjct: 76 PALIVAPLLVGALGAVVERFGLRTVHRYGHVAELLFTFGLAYLIEEGVKLVWGLPAVPYR 135 Query: 121 MPDILSGSLFTVMGAPFPAYRAFIMCVAVGVLALLYFTITRTRVGLIIQAALTHPTMAEA 180 +PD L G LFT+ + FP YRAF+M V++ +L ++ +TRTR+GL+IQAALTHP M EA Sbjct: 136 VPDALDGPLFTLFTSSFPKYRAFMMLVSLLMLVGIFLLLTRTRIGLVIQAALTHPDMVEA 195 Query: 181 LGHNVPRIFMSVFGVGVGLAALAGAVGAPAAVTEPAMAHAVGSIVFVIIVLGGIGSLAGA 240 LGHNVPR+FM VFG G LA LAG +G A VTEP+MA AVGSIVFV+ V+GG+GSL GA Sbjct: 196 LGHNVPRVFMLVFGGGCALAGLAGVIGGNAFVTEPSMAAAVGSIVFVVAVVGGMGSLVGA 255 Query: 241 FAASILIGFIQTFAVLVDASPYQLISSLGNDSLSNLMNIELFKITVAQLGPVLPFFVMVA 300 F AS+LIG IQTFAV +D S ++ +G ++ I ++ +T+AQ+ PVLP+ ++V Sbjct: 256 FVASLLIGCIQTFAVTLDISVTSVLGKIGVTLNPDVPLISVWNLTIAQVAPVLPYLLLVL 315 Query: 301 VLVLRPRGMFGKRES 315 +L+ RPRG+ G RES Sbjct: 316 MLIFRPRGLMGTRES 330