BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0184.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004682809.1| IclR family transcriptional regulator [Cupri... 228 6e-58 ref|YP_004687997.1| transcriptional regulator IclR family [Cupri... 226 2e-57 ref|ZP_02377321.1| transcriptional regulator, IclR family protei... 182 3e-44 ref|ZP_02881784.1| transcriptional regulator, IclR family [Burkh... 181 8e-44 ref|ZP_02909195.1| transcriptional regulator, IclR family [Burkh... 178 6e-43 >ref|YP_004682809.1| IclR family transcriptional regulator [Cupriavidus necator N-1] gb|AEI82961.1| transcriptional regulator IclR family [Cupriavidus necator N-1] Length = 249 Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 116/233 (49%), Positives = 157/233 (67%), Gaps = 1/233 (0%) Query: 20 EPAA-DEVGVAAVNRALMILDCFTSDESVLSLAVISKKTGLYKSTILRLVQSLEAYGYIN 78 EPA DEVGVAAVNRAL +LD F+ ++ +LA ++++TGLYKSTILRL +SLEAYGY+ Sbjct: 11 EPAGEDEVGVAAVNRALSLLDTFSKEQLSFTLAQMAERTGLYKSTILRLAESLEAYGYLR 70 Query: 79 RLISGSYVLGAAPIKLASIASKALHPAEKVMPVLRELAQTTSSSASFYVRTGEMRLCAYR 138 R + LG P +LA++ + LHPAE VMPVLR L + T SA+FYV +G+ RLCAYR Sbjct: 71 RGEGSVFTLGPTPFRLATLYQRNLHPAELVMPVLRNLVELTEESATFYVISGDKRLCAYR 130 Query: 139 VDSPRSIRDNVQAGQLLALDKGAGGHVLTAFDNLSGDQLVQMPQPFIRVTRGERDSETAA 198 +SP +I DNVQAG++ L++GAGG VL AF G + + + ++RGE + Sbjct: 131 ANSPLAITDNVQAGEMRPLERGAGGKVLLAFVGRQGPEFDTIREEMFSLSRGELYEGIVS 190 Query: 199 IACPVFGVNNRLEGALSLSGPLHHFNDEAVAAMIPHLIAAARVLTTSLFGDAS 251 +A PVFG ++LEGA+S+SGP EA+A + PHL A++ LT GD S Sbjct: 191 LASPVFGSADKLEGAISISGPATRLGKEAIARIKPHLFRASQHLTELFGGDGS 243 >ref|YP_004687997.1| transcriptional regulator IclR family [Cupriavidus necator N-1] gb|AEI81959.1| transcriptional regulator IclR family [Cupriavidus necator N-1] Length = 249 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 118/245 (48%), Positives = 163/245 (66%), Gaps = 4/245 (1%) Query: 8 ATKDVDLENEEGEPAADE-VGVAAVNRALMILDCFTSDESVLSLAVISKKTGLYKSTILR 66 A K++D + E PA +E VGVAAVNRAL +LD F+ + +LA ++++TGLYKSTILR Sbjct: 2 ARKNLDPKQE---PAGEEEVGVAAVNRALSLLDKFSKEHLSFTLAQMAERTGLYKSTILR 58 Query: 67 LVQSLEAYGYINRLISGSYVLGAAPIKLASIASKALHPAEKVMPVLRELAQTTSSSASFY 126 L +SLEAYGY+ R + LG P +LA++ + LHPAE VMPVLR L + T SA+FY Sbjct: 59 LAESLEAYGYLRRGEGSVFTLGPTPFRLATLYQRNLHPAELVMPVLRSLVELTEESATFY 118 Query: 127 VRTGEMRLCAYRVDSPRSIRDNVQAGQLLALDKGAGGHVLTAFDNLSGDQLVQMPQPFIR 186 V +G+ RLCAYR +SP +I DNVQAG++ L++GAGG VL AF G + + + Sbjct: 119 VISGDKRLCAYRANSPLAITDNVQAGEMRPLERGAGGKVLLAFVGRQGSEFDTIREEMFS 178 Query: 187 VTRGERDSETAAIACPVFGVNNRLEGALSLSGPLHHFNDEAVAAMIPHLIAAARVLTTSL 246 ++RGE ++A PVFG ++LEGA+S+SGP + EA+A + PHL A++ LT Sbjct: 179 LSRGELYEGIVSLASPVFGSGDKLEGAISISGPATRLSKEAIARIKPHLFRASQHLTELF 238 Query: 247 FGDAS 251 GD S Sbjct: 239 GGDGS 243 >ref|ZP_02377321.1| transcriptional regulator, IclR family protein [Burkholderia ubonensis Bu] Length = 275 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 104/247 (42%), Positives = 147/247 (59%), Gaps = 3/247 (1%) Query: 4 VIKKATKDVDLEN-EEGEPAADEVGVAAVNRALMILDCFTSDESVLSLAVISKKTGLYKS 62 + A+ +VD+ E G PA E GVAAVNRAL L F + L LA +S++TGL S Sbjct: 12 IYGPASHEVDMSKVETGNPA--EGGVAAVNRALTALLAFGNAPGGLMLAQVSEETGLNMS 69 Query: 63 TILRLVQSLEAYGYINRLISGSYVLGAAPIKLASIASKALHPAEKVMPVLRELAQTTSSS 122 T+LR+ +SLE + +I RL G YVLG A +L + ++ E VMP+L +L+ T + Sbjct: 70 TLLRMFESLEQFRFIKRLPDGRYVLGPAVFQLGMMYRESFQLREYVMPILSKLSAETGET 129 Query: 123 ASFYVRTGEMRLCAYRVDSPRSIRDNVQAGQLLALDKGAGGHVLTAFDNLSGDQLVQMPQ 182 A+FYVR G+ R+C +R+ + RS+R +++ G LD GA G VL +F G + + Sbjct: 130 AAFYVREGDQRVCLFRIQAQRSVRTHLREGDRFPLDVGAAGRVLLSFSGTRGGDYEKTAE 189 Query: 183 PFIRVTRGERDSETAAIACPVFGVNNRLEGALSLSGPLHHFNDEAVAAMIPHLIAAARVL 242 V+ ERD E+AAIACP FGV L GA+SL P + FN + +A +P + AAA L Sbjct: 190 QGYAVSIAERDPESAAIACPAFGVGRVLSGAISLGVPRYRFNKKVLADYLPRVQAAAAEL 249 Query: 243 TTSLFGD 249 T +L GD Sbjct: 250 THALGGD 256 >ref|ZP_02881784.1| transcriptional regulator, IclR family [Burkholderia graminis C4D1M] gb|EDT13213.1| transcriptional regulator, IclR family [Burkholderia graminis C4D1M] Length = 257 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 103/233 (44%), Positives = 147/233 (63%), Gaps = 4/233 (1%) Query: 23 ADEVGVAAVNRALMILDCFTSDESVLSLAVISKKTGLYKSTILRLVQSLEAYGYINRLIS 82 AD+ GVAA++RA IL F E LSLA I+++TG YKSTILRL+ SLE G+I RL Sbjct: 6 ADKGGVAALDRAFAILGVFQPGERALSLAEIARRTGFYKSTILRLLSSLERGGFIRRL-D 64 Query: 83 GSYVLGAAPIKLASIASKALHPAEKVMPVLRELAQTTSSSASFYVRTGEMRLCAYRVDSP 142 G+Y +G P++LA I ++ H E + PVLR+L+ + ++SFYVR GE R+ +RV+ P Sbjct: 65 GNYSIGPEPLRLAQIFQESFHIREVIEPVLRQLSDDSGETSSFYVRQGEYRVVLHRVEPP 124 Query: 143 RSIRDNVQAGQLLALDKGAGGHVLTAFDNLSGDQLVQMPQPFIRVTRGERDSETAAIACP 202 RS+R +++ G+ +D+GA G +L AF S + + ++ GERD +TAA++ P Sbjct: 125 RSVRVSIREGERFPIDRGASGKILIAFSKPSRATHDAVRERLWALSYGERDPDTAAVSVP 184 Query: 203 VFGVNNRLEGALSLSGPLHHF--NDEAVAAMIPHLIAAARVLTTSLFGDASLL 253 VFG N+ L GAL+LSGP +D+ AA L +AAR T +L GD L Sbjct: 185 VFGPNSELAGALTLSGPKDRLGASDKMRAACNLLLTSAARA-TAALGGDHRLF 236 >ref|ZP_02909195.1| transcriptional regulator, IclR family [Burkholderia ambifaria MEX-5] gb|EDT39656.1| transcriptional regulator, IclR family [Burkholderia ambifaria MEX-5] Length = 254 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 136/225 (60%) Query: 25 EVGVAAVNRALMILDCFTSDESVLSLAVISKKTGLYKSTILRLVQSLEAYGYINRLISGS 84 E GVAAVNRAL L F + L LA +S++TGL ST+LR+ +SLE + +I RL G Sbjct: 11 EGGVAAVNRALTALLAFGNAPGGLMLAQVSEETGLNMSTLLRMFESLEQFRFIKRLPDGR 70 Query: 85 YVLGAAPIKLASIASKALHPAEKVMPVLRELAQTTSSSASFYVRTGEMRLCAYRVDSPRS 144 YVLG A +L + ++ E VMP+L +L+ T +A+FYVR G+ R+C +R+ + RS Sbjct: 71 YVLGPAVFQLGMMYRESFQLREYVMPILSKLSAQTGETAAFYVREGDQRVCLFRIQAQRS 130 Query: 145 IRDNVQAGQLLALDKGAGGHVLTAFDNLSGDQLVQMPQPFIRVTRGERDSETAAIACPVF 204 +R +++ G LD GA G VL AF G + + V+ ERD E+AAIACP F Sbjct: 131 VRTHLREGDRFPLDVGAAGRVLLAFSGTRGGDYEKTAEQGYAVSIAERDPESAAIACPAF 190 Query: 205 GVNNRLEGALSLSGPLHHFNDEAVAAMIPHLIAAARVLTTSLFGD 249 GV L GA+SL P + FN + +A +P + AAA LT +L GD Sbjct: 191 GVGRVLSGAISLGVPRYRFNKKVLADYLPRVQAAAAELTHALGGD 235