BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0183.p (403 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_586281.1| acyl-CoA transferase/L-carnitine dehydratase, C... 493 e-137 ref|YP_003101861.1| L-carnitine dehydratase/bile acid-inducible ... 481 e-133 ref|YP_299150.1| L-carnitine dehydratase/bile acid-inducible pro... 478 e-132 ref|YP_004682818.1| CoA-transferase; caiB/baiF CoA-transferase f... 476 e-132 ref|YP_841722.1| acyl-CoA transferase/carnitine dehydratase [Ral... 471 e-131 >ref|YP_586281.1| acyl-CoA transferase/L-carnitine dehydratase, CaiB [Cupriavidus metallidurans CH34] gb|ABF11012.1| acyl-CoA transferase/L-carnitine dehydratase, CaiB [Cupriavidus metallidurans CH34] Length = 414 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 245/401 (61%), Positives = 305/401 (76%), Gaps = 6/401 (1%) Query: 1 MNKLLEGVTVLDLTNVLSGPFTGYQMALLGANVIKVETPGAGDLARQLGADSDLNKEKMG 60 M K L + VLDLTNVL+GPF +Q+A +GA VIKVETPG GDLARQLGAD++LN++ MG Sbjct: 16 MQKPLRNIRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLARQLGADAELNRKLMG 75 Query: 61 TSFLAQNAGKRSISLNLKSAKGKEVLRRLAGNADVILENFRPGVMDRLGVGYNALKDEFP 120 SFLAQN GKRSI++NLK A+GKEV R+L +ADV++ENFRPGVM RLG+GY+ LK P Sbjct: 76 VSFLAQNPGKRSITINLKHARGKEVFRKLVQSADVVVENFRPGVMTRLGLGYDELKLVNP 135 Query: 121 RLVYCAISGFGQTGPLADAPAYDQIIQGRSGVMSITGDEQSAPLRVGYPVCDTIGGMTAA 180 RL+YCAISGFGQ GPL+D PAYDQIIQG +GVMSITGD Q+AP RVGYPV DTIGGMTAA Sbjct: 136 RLIYCAISGFGQDGPLSDLPAYDQIIQGMAGVMSITGDPQTAPYRVGYPVSDTIGGMTAA 195 Query: 181 FAIASALVSRNNTGKGCFIDVSMLDSVMVTMGWIVSNQLIAGRSPVPMGNDNFTASPSGA 240 F+IA++L T +G F+DVSML++ +VTMGW+VSN L+AG+ P PMGN+N TASPSG Sbjct: 196 FSIAASLADTERT-EGYFLDVSMLEATLVTMGWVVSNHLVAGKDPAPMGNENMTASPSGT 254 Query: 241 FRTGDGLLNIAANKQEQFEILCDLLGRSDLKTDPRFAEREIRKTNRKALSEILEEELRRG 300 FRTGDG LNIAANKQEQFE +C ++GR +L TDPRFAER+ R NR AL+ LE EL + Sbjct: 255 FRTGDGPLNIAANKQEQFEAVCRVVGRPELATDPRFAERQSRLANRAALTAELEAELAKK 314 Query: 301 DAAEWERKFNQAGVPAGQVLSVLDALTQDQVQHRGLLMKVLFNKEDLDQT-QEITLTRSG 359 A +W + N+AGVPAG VL V D L QV+ RG++ E++ ++I L R+G Sbjct: 315 SATDWWQLLNEAGVPAGPVLKVPDTLALPQVRDRGMIGAF----ENVPGVGRDIRLLRTG 370 Query: 360 FTIDGEQTGVRHGPPRLGQHTDEILLATGYTPANISNLREE 400 F ++G+ V PP+LG+HTD+IL GY A I L++E Sbjct: 371 FKVNGQAPSVDTPPPQLGEHTDDILGELGYDAAAIDTLKQE 411 >ref|YP_003101861.1| L-carnitine dehydratase/bile acid-inducible protein F [Actinosynnema mirum DSM 43827] gb|ACU38015.1| L-carnitine dehydratase/bile acid-inducible protein F [Actinosynnema mirum DSM 43827] Length = 407 Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust. Identities = 236/399 (59%), Positives = 296/399 (74%), Gaps = 2/399 (0%) Query: 5 LEGVTVLDLTNVLSGPFTGYQMALLGANVIKVETPGAGDLARQLGADSDLNKEKMGTSFL 64 L GV VLDL+NVL+GP+ GYQ+ALLGA+V+KVE PG GDLARQLGA ++LN+ ++G SFL Sbjct: 11 LTGVRVLDLSNVLAGPYAGYQLALLGADVVKVEVPGVGDLARQLGASAELNRRRLGASFL 70 Query: 65 AQNAGKRSISLNLKSAKGKEVLRRLAGNADVILENFRPGVMDRLGVGYNALKDEFPRLVY 124 AQNA KRS++LNLKS++GKEVLRRL +ADV++ENFRPGV++RLG G++AL++ PRLVY Sbjct: 71 AQNAQKRSLTLNLKSSRGKEVLRRLVQSADVLVENFRPGVLERLGFGWDALRELNPRLVY 130 Query: 125 CAISGFGQTGPLADAPAYDQIIQGRSGVMSITGDEQSAPLRVGYPVCDTIGGMTAAFAIA 184 CAISGFGQTGPL PAYDQIIQG SG+MS+TG +APLR GYP+ D +GG+ AAFA++ Sbjct: 131 CAISGFGQTGPLRAKPAYDQIIQGYSGMMSVTGTTGTAPLRAGYPIADVLGGLAAAFAVS 190 Query: 185 SALVSRNNTGKGCFIDVSMLDSVMVTMGWIVSNQLIAGRSPVPMGNDNFTASPSGAFRTG 244 SALV R TG GC IDVSML++ + MGW+VSN LIAG++P P+GNDN TA+PSG FRT Sbjct: 191 SALVGRERTGVGCSIDVSMLETAVTAMGWVVSNHLIAGQAPRPLGNDNGTAAPSGTFRTS 250 Query: 245 DGLLNIAANKQEQFEILCDLLGRSDLKTDPRFAEREIRKTNRKALSEILEEELRRGDAAE 304 DG LNIAANKQEQFE+LC LGR +L DPRFAERE RK +R L+ LE L + AA Sbjct: 251 DGDLNIAANKQEQFELLCAALGRPELVADPRFAERESRKAHRAQLTAELEVALTKESAAH 310 Query: 305 WERKFNQAGVPAGQVLSVLDALTQDQVQHRGLLMKVLFNKEDLDQTQEITLTRSGFTIDG 364 WE + AGVPA VLSV + L Q+ RGL+ ++ F L + + + +G +D Sbjct: 311 WEEALSSAGVPAAAVLSVPEVLASPQIVDRGLVHELPFPGGVLPEP--LRVLGNGIRVDD 368 Query: 365 EQTGVRHGPPRLGQHTDEILLATGYTPANISNLREEGVV 403 + PP LG+HTD +L GY I+ LREEG V Sbjct: 369 RPSTPSLPPPVLGEHTDSLLAELGYAAEEIAALREEGSV 407 >ref|YP_299150.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia eutropha JMP134] gb|AAZ64306.1| L-carnitine dehydratase/bile acid-inducible protein F [Ralstonia eutropha JMP134] Length = 399 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 248/404 (61%), Positives = 304/404 (75%), Gaps = 6/404 (1%) Query: 1 MNKLLEGVTVLDLTNVLSGPFTGYQMALLGANVIKVETPGAGDLARQLGADSDLNKEKMG 60 M K L V VLDLTNVL+GPF +Q+A +GA VIKVETPG GDLARQLGAD+DLN+ MG Sbjct: 1 MQKPLRHVRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLARQLGADADLNQRLMG 60 Query: 61 TSFLAQNAGKRSISLNLKSAKGKEVLRRLAGNADVILENFRPGVMDRLGVGYNALKDEFP 120 SFLAQN GK+SI+LNLK A+GKEV R+L +ADV++ENFRPGVM RLG+GY+ LK + P Sbjct: 61 VSFLAQNPGKQSITLNLKHARGKEVFRKLVQSADVVVENFRPGVMARLGLGYDVLKQDNP 120 Query: 121 RLVYCAISGFGQTGPLADAPAYDQIIQGRSGVMSITGDEQSAPLRVGYPVCDTIGGMTAA 180 RL+YCAISGFGQ GPL+D PAYDQIIQG SGVMSITGD ++AP RVGYPV DTIGG+TAA Sbjct: 121 RLIYCAISGFGQDGPLSDLPAYDQIIQGMSGVMSITGDAETAPYRVGYPVSDTIGGITAA 180 Query: 181 FAIASALVSRNNTGKGCFIDVSMLDSVMVTMGWIVSNQLIAGRSPVPMGNDNFTASPSGA 240 FAIA++L T +G FIDVSML++ + TMGW+VSN LIAG++P PMGN+NFTASPSG Sbjct: 181 FAIAASLADHQRT-EGYFIDVSMLEATLATMGWVVSNHLIAGKAPAPMGNENFTASPSGT 239 Query: 241 FRTGDGLLNIAANKQEQFEILCDLLGRSDLKTDPRFAEREIRKTNRKALSEILEEELRRG 300 FRTGDGLLNIAANKQEQFE +C ++GR +L D RFA R+ R NR AL++ LE EL + Sbjct: 240 FRTGDGLLNIAANKQEQFEAVCRVVGRLELIADERFAARQARLANRAALTQALEAELEKK 299 Query: 301 DAAEWERKFNQAGVPAGQVLSVLDALTQDQVQHRGLLMKVLFNKEDLDQT-QEITLTRSG 359 A EW N+AGVPAG VL V L Q QV+ RG++ D+ ++I + R+G Sbjct: 300 PANEWWALLNEAGVPAGPVLGVPQTLEQPQVRDRGMIGTF----ADVPGVGRDIRVVRTG 355 Query: 360 FTIDGEQTGVRHGPPRLGQHTDEILLATGYTPANISNLREEGVV 403 F ++ E V PP+LG+HT +IL GY+ A+I LR+E V Sbjct: 356 FKLNQEAPSVDTPPPQLGEHTQQILAGLGYSEADIDTLRQERAV 399 >ref|YP_004682818.1| CoA-transferase; caiB/baiF CoA-transferase family [Cupriavidus necator N-1] gb|AEI82970.1| CoA-transferase; caiB/baiF CoA-transferase family [Cupriavidus necator N-1] Length = 399 Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust. Identities = 248/403 (61%), Positives = 303/403 (75%), Gaps = 4/403 (0%) Query: 1 MNKLLEGVTVLDLTNVLSGPFTGYQMALLGANVIKVETPGAGDLARQLGADSDLNKEKMG 60 M K L V VLDLTNVL+GPF +Q+A +GA VIKVETPG GDLARQLGAD +LN+ MG Sbjct: 1 MQKPLRNVRVLDLTNVLAGPFCCHQLAHMGAEVIKVETPGTGDLARQLGADPELNQRLMG 60 Query: 61 TSFLAQNAGKRSISLNLKSAKGKEVLRRLAGNADVILENFRPGVMDRLGVGYNALKDEFP 120 SFLAQN GK+SI++NLK A+GKEV R+L +ADV++ENFRPGVM+RLG+GY LK E P Sbjct: 61 VSFLAQNPGKQSITINLKHARGKEVFRKLVCSADVVVENFRPGVMNRLGLGYEMLKQENP 120 Query: 121 RLVYCAISGFGQTGPLADAPAYDQIIQGRSGVMSITGDEQSAPLRVGYPVCDTIGGMTAA 180 RL+YCAISGFGQ GPLA+ PAYDQIIQG SGVMSITGD Q+AP RVGYPV DTIGG+TAA Sbjct: 121 RLIYCAISGFGQDGPLAELPAYDQIIQGMSGVMSITGDSQTAPYRVGYPVSDTIGGLTAA 180 Query: 181 FAIASALVSRNNTGKGCFIDVSMLDSVMVTMGWIVSNQLIAGRSPVPMGNDNFTASPSGA 240 FA+A++L T +G FIDVSMLD+ + TMGW+VSN LIAG++P PMGN+N TASPSG Sbjct: 181 FAVAASLADHQRT-EGYFIDVSMLDATLATMGWVVSNNLIAGKTPAPMGNENMTASPSGT 239 Query: 241 FRTGDGLLNIAANKQEQFEILCDLLGRSDLKTDPRFAEREIRKTNRKALSEILEEELRRG 300 FRTGDGLLNIAANKQEQFE +C ++GR +L TD RFA+R+ R NR AL++ LE EL + Sbjct: 240 FRTGDGLLNIAANKQEQFEAVCRVVGRPELATDERFAQRQGRLANRVALTDALEVELVKK 299 Query: 301 DAAEWERKFNQAGVPAGQVLSVLDALTQDQVQHRGLLMKVLFNKEDLDQTQEITLTRSGF 360 A EW N A VPAG VLSV D L QV+ RG++ V N + ++I + R+GF Sbjct: 300 PAMEWWPLLNAADVPAGPVLSVPDTLAHPQVRDRGMI-GVFPNAPGVG--RDIRVVRTGF 356 Query: 361 TIDGEQTGVRHGPPRLGQHTDEILLATGYTPANISNLREEGVV 403 ++ E V PP LGQHT ++L + GY+ ++I L EE V Sbjct: 357 KVNREAPAVDTPPPELGQHTRQVLGSLGYSDSDIDQLSEERAV 399 >ref|YP_841722.1| acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16] emb|CAJ96992.1| predicted acyl-CoA transferase/carnitine dehydratase [Ralstonia eutropha H16] Length = 412 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 241/403 (59%), Positives = 298/403 (73%), Gaps = 4/403 (0%) Query: 1 MNKLLEGVTVLDLTNVLSGPFTGYQMALLGANVIKVETPGAGDLARQLGADSDLNKEKMG 60 M K L + VLDLTNVL+GPF +Q+A LGA VIKVETPG GDLARQLGAD++LN+ MG Sbjct: 14 MKKPLRHIRVLDLTNVLAGPFCCHQLAHLGAEVIKVETPGTGDLARQLGADAELNQRLMG 73 Query: 61 TSFLAQNAGKRSISLNLKSAKGKEVLRRLAGNADVILENFRPGVMDRLGVGYNALKDEFP 120 SFLAQN GK+S++LNLK A+GKEV R+L +ADV++ENFRPGVMDRLG+GY LK + P Sbjct: 74 VSFLAQNPGKQSVTLNLKHARGKEVFRKLVQSADVLVENFRPGVMDRLGLGYETLKQDNP 133 Query: 121 RLVYCAISGFGQTGPLADAPAYDQIIQGRSGVMSITGDEQSAPLRVGYPVCDTIGGMTAA 180 RL+YCAISGFGQ GPLA PAYDQIIQG +GVMSITGD QSAPLRVGYPV DTIGG+TAA Sbjct: 134 RLIYCAISGFGQDGPLAGLPAYDQIIQGMAGVMSITGDAQSAPLRVGYPVSDTIGGLTAA 193 Query: 181 FAIASALVSRNNTGKGCFIDVSMLDSVMVTMGWIVSNQLIAGRSPVPMGNDNFTASPSGA 240 A+++AL T +G F+DVSML++ + TMGW+VSN LIAG+ P PMGN+N TASPSG Sbjct: 194 LAVSAALADHQRT-EGYFVDVSMLEATLATMGWVVSNHLIAGKVPAPMGNENMTASPSGT 252 Query: 241 FRTGDGLLNIAANKQEQFEILCDLLGRSDLKTDPRFAEREIRKTNRKALSEILEEELRRG 300 FRT DGLLNIAANKQEQFE +C +LGR +L DPRFA+R+ R NR L++ LE EL + Sbjct: 253 FRTADGLLNIAANKQEQFEAVCRVLGRPELAADPRFAQRQARLANRGELTQALEAELAKK 312 Query: 301 DAAEWERKFNQAGVPAGQVLSVLDALTQDQVQHRGLLMKVLFNKEDLDQTQEITLTRSGF 360 A EW +AGVPAG VL V L QV+ RG++ + + ++I + R+GF Sbjct: 313 PATEWWPLLTEAGVPAGPVLDVPQTLAHPQVRERGMIGEF---ADAPGVGRDIRVVRTGF 369 Query: 361 TIDGEQTGVRHGPPRLGQHTDEILLATGYTPANISNLREEGVV 403 ++ E V PP LGQHT ++L + GY+ A+I L EE + Sbjct: 370 KLNREAPAVDTPPPELGQHTRQVLASLGYSDADIDQLSEERAI 412