BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0177.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004304736.1| carbon monoxide dehydrogenase subunit G supe... 187 2e-45 ref|ZP_06894525.1| carbon monoxide dehydrogenase operon G protei... 182 9e-44 ref|ZP_07027515.1| carbon monoxide dehydrogenase subunit G [Afip... 181 2e-43 ref|ZP_02164919.1| hypothetical protein HPDFL43_20507 [Hoeflea p... 179 9e-43 ref|ZP_07657545.1| carbon monoxide dehydrogenase subunit G [Rose... 178 1e-42 >ref|YP_004304736.1| carbon monoxide dehydrogenase subunit G superfamily [Polymorphum gilvum SL003B-26A1] gb|ADZ71432.1| Carbon monoxide dehydrogenase subunit G superfamily [Polymorphum gilvum SL003B-26A1] Length = 197 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 87/144 (60%), Positives = 111/144 (77%) Query: 1 MEMKDEIRLDASREAVWAALNNPDVLKACIPGCETLDMLSDTEFEALVVIKVGPIRAKFA 60 M+M D R++A RE VW ALN+PDVLKA IPGCE L SDT+ EA V +KVGP++A F Sbjct: 1 MKMADSQRIEAPREKVWQALNDPDVLKASIPGCEDLVKHSDTDMEAKVTLKVGPVKATFG 60 Query: 61 GKVTLSEINAPISYRLTGEGTGGVAGFAKADITVDLEEEGPSTTLLRYGVTANIGGKIAQ 120 GKVTLSE++ P YR+ GEG+GGVAGFAK TV LEE+GP+ T+L Y V AN+GGK+AQ Sbjct: 61 GKVTLSELDPPNGYRIDGEGSGGVAGFAKGGATVRLEEDGPNATVLHYTVDANVGGKLAQ 120 Query: 121 LGSRMIDATARKMADQFFARFNGH 144 LG+R+ID+TA+++A +FF F H Sbjct: 121 LGARLIDSTAKRLAGEFFETFGKH 144 >ref|ZP_06894525.1| carbon monoxide dehydrogenase operon G protein [Roseomonas cervicalis ATCC 49957] gb|EFH13774.1| carbon monoxide dehydrogenase operon G protein [Roseomonas cervicalis ATCC 49957] Length = 238 Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 19/191 (9%) Query: 1 MEMKDEIRLDASREAVWAALNNPDVLKACIPGCETLDMLSDTEFEALVVIKVGPIRAKFA 60 MEM E R++A R+ VW LN+P++L+A IPGCE+++ + F+A V +K+GP+ AKFA Sbjct: 1 MEMTGERRIEAPRQTVWEGLNDPEILRASIPGCESVERTGEDSFQARVALKIGPMAAKFA 60 Query: 61 GKVTLSEINAPISYRLTGEGTGGVAGFAKADITVDLEEEGPSTTLLRYGVTANIGGKIAQ 120 GKV LS IN P SY ++GEG GG GFAK V LEEEGP TLLRY V A +GGK+AQ Sbjct: 61 GKVQLSNINPPASYTISGEGNGGAMGFAKGGADVALEEEGPQATLLRYAVKAQVGGKMAQ 120 Query: 121 LGSRMIDATARKMADQFFARFNGHFTGDEGASGTSVRDVAETVGAAPVNAADTAS-ITTA 179 LG+R+ID+TA++MADQFF RF A V PV AA+ + A Sbjct: 121 LGARLIDSTAKQMADQFFDRF------------------AAAVVQQPVAAANAEERLAAA 162 Query: 180 SASIPATGQPV 190 + + P GQPV Sbjct: 163 TLAAPRMGQPV 173 >ref|ZP_07027515.1| carbon monoxide dehydrogenase subunit G [Afipia sp. 1NLS2] gb|EFI51271.1| carbon monoxide dehydrogenase subunit G [Afipia sp. 1NLS2] Length = 149 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/150 (58%), Positives = 111/150 (74%), Gaps = 1/150 (0%) Query: 1 MEMKDEIRLDASREAVWAALNNPDVLKACIPGCETLDMLSDTEFEALVVIKVGPIRAKFA 60 MEM R+ AS+E VWAALN+P +L+ CIPGC+ L+ SD+E A V +KVGP++A F Sbjct: 1 MEMNGSERIAASKEVVWAALNDPAILQQCIPGCQKLEKASDSEMTATVTLKVGPVKASFN 60 Query: 61 GKVTLSEINAPISYRLTGEGTGGVAGFAKADITVDLEEEGPSTTLLRYGVTANIGGKIAQ 120 GKVTLS+I+AP SYR+TGEG GGVAGFAK V LE++ T+L Y V A +GGKIAQ Sbjct: 61 GKVTLSDIDAPNSYRITGEGAGGVAGFAKGGANVRLEQD-ADITVLHYDVDAQVGGKIAQ 119 Query: 121 LGSRMIDATARKMADQFFARFNGHFTGDEG 150 LGSR+ID+TA+K+A +FFA+F TG G Sbjct: 120 LGSRLIDSTAKKLAGEFFAKFGNVVTGTAG 149 >ref|ZP_02164919.1| hypothetical protein HPDFL43_20507 [Hoeflea phototrophica DFL-43] gb|EDQ35614.1| hypothetical protein HPDFL43_20507 [Hoeflea phototrophica DFL-43] Length = 151 Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 84/142 (59%), Positives = 107/142 (75%), Gaps = 1/142 (0%) Query: 1 MEMKDEIRLDASREAVWAALNNPDVLKACIPGCETLDMLSDTEFEALVVIKVGPIRAKFA 60 MEM E R+ A R+ VW ALN+PDVL+ CIPGC++L+ SDTE A V +K+GP+ AKF+ Sbjct: 1 MEMHGEERIAAPRQLVWEALNDPDVLRECIPGCQSLEKSSDTEMSATVKVKIGPVSAKFS 60 Query: 61 GKVTLSEINAPISYRLTGEGTGGVAGFAKADITVDLEEEGPSTTLLRYGVTANIGGKIAQ 120 G+VTL INAP SY ++GEG GG+AGFA V L EEG + T+L Y V A +GGKIAQ Sbjct: 61 GEVTLENINAPESYTISGEGKGGIAGFANGGADVKLVEEG-AETVLSYEVKAQVGGKIAQ 119 Query: 121 LGSRMIDATARKMADQFFARFN 142 LGSR+ID+T++K+A QFF RFN Sbjct: 120 LGSRLIDSTSKKLAGQFFTRFN 141 >ref|ZP_07657545.1| carbon monoxide dehydrogenase subunit G [Roseibium sp. TrichSKD4] gb|EFO33690.1| carbon monoxide dehydrogenase subunit G [Roseibium sp. TrichSKD4] Length = 226 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 85/142 (59%), Positives = 106/142 (74%), Gaps = 1/142 (0%) Query: 1 MEMKDEIRLDASREAVWAALNNPDVLKACIPGCETLDMLSDTEFEALVVIKVGPIRAKFA 60 M+M+ R+ A RE VW ALN+P+VLKACIPGCE+L+M S TE A V K+GP++AKF Sbjct: 1 MDMEGTYRIPAPREKVWDALNDPEVLKACIPGCESLEMTSPTEMTAAVTSKIGPVKAKFK 60 Query: 61 GKVTLSEINAPISYRLTGEGTGGVAGFAKADITVDLEEEGPSTTLLRYGVTANIGGKIAQ 120 G VTL INAP SY + GEG GGVAGFAK V L EEG + T+L Y A +GGK+AQ Sbjct: 61 GAVTLENINAPESYTIVGEGKGGVAGFAKGSADVSLAEEG-AETVLTYTAKAQVGGKLAQ 119 Query: 121 LGSRMIDATARKMADQFFARFN 142 LGSR+ID+TA+KMAD+FF +F+ Sbjct: 120 LGSRLIDSTAKKMADEFFGKFS 141