BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0173.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628875.1| beta-lactamase-like protein [Bradyrhizobiacea... 335 5e-90 ref|NP_660009.1| beta-lactamase like protein [Rhizobium etli CFN... 311 7e-83 ref|YP_002825141.1| putative beta-lactamase-like protein [Sinorh... 300 2e-79 gb|AEJ26983.1| Putative beta-lactamase [Paracoccus denitrificans... 264 8e-69 ref|ZP_03524531.1| probable beta-lactamase like protein [Rhizobi... 199 3e-49 >ref|ZP_08628875.1| beta-lactamase-like protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08234.1| beta-lactamase-like protein [Bradyrhizobiaceae bacterium SG-6C] Length = 251 Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 159/253 (62%), Positives = 193/253 (76%), Gaps = 2/253 (0%) Query: 1 MKMHVLSGGRLRMKKSVYLPDADRQETIELPVSCFLLRHPQGNVLFDTGCHPSTATEPEA 60 MKMHVLSGGRLRM++S+Y PDA R ETIELPVSC L+RH QGNVLFDTGCHPS A PEA Sbjct: 1 MKMHVLSGGRLRMRRSIYFPDAGRDETIELPVSCMLMRHKQGNVLFDTGCHPSIAENPEA 60 Query: 61 RWGSMAKAMVPISRPEENVVDQLKLIGFTPDDIDVVVNSHFHSDHCGCNEFFKKATVVCH 120 RWGS+AK M PI P +NV+ L +G PDDIDVVV SH H+DHCGCNEFF+K+T+V H Sbjct: 61 RWGSVAKYMTPIMPPGDNVLTGLTAVGLGPDDIDVVVCSHLHTDHCGCNEFFRKSTIVVH 120 Query: 121 ARELEAARQEDAVKFGFLPVDWKQPMPIKAIEGEHDLFNDGRIVLIPVPGHTAGMTAAMV 180 AREL AAR G+ DW P+P+K I+G+ DLF DG IVL+P+PGHT G A+V Sbjct: 121 ARELAAARA--PDAAGYFAADWDHPIPMKTIDGQFDLFGDGTIVLVPLPGHTPGTVGALV 178 Query: 181 GLDKSGAFLLASDAVALRANLEGDINPRNTWNAELSSRSMEDIRRIESGGATVVFGHDDA 240 LD+SG FLL SDAV++R NL+ +I P+NT NAE +S E+IRRIE GATV+ HD+A Sbjct: 179 KLDRSGEFLLTSDAVSIRENLDKNIVPKNTKNAEEFLKSFEEIRRIEKAGATVICSHDEA 238 Query: 241 QWNSLKKGVEFYD 253 QW SL+KG++ Y+ Sbjct: 239 QWTSLRKGMDAYE 251 >ref|NP_660009.1| beta-lactamase like protein [Rhizobium etli CFN 42] ref|YP_001984317.1| probable beta-lactamase like protein [Rhizobium etli CIAT 652] gb|AAM55022.1| probable beta-lactamase like protein [Rhizobium etli CFN 42] gb|ACE93767.1| probable beta-lactamase like protein [Rhizobium etli CIAT 652] gb|EGE58680.1| beta-lactamase like protein [Rhizobium etli CNPAF512] Length = 253 Score = 311 bits (796), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 136/253 (53%), Positives = 182/253 (71%) Query: 1 MKMHVLSGGRLRMKKSVYLPDADRQETIELPVSCFLLRHPQGNVLFDTGCHPSTATEPEA 60 MKMH L GRLRM++S+Y+P A ++E IELPV L+RHPQGN LFD+GC+P A +P A Sbjct: 1 MKMHFLEAGRLRMRRSIYVPGALKEEAIELPVHATLMRHPQGNALFDSGCNPEAAIDPGA 60 Query: 61 RWGSMAKAMVPISRPEENVVDQLKLIGFTPDDIDVVVNSHFHSDHCGCNEFFKKATVVCH 120 RWG ++K M PI PE VV QLK + P+DIDVV+ SH H DHCGCN +F++AT++CH Sbjct: 61 RWGGLSKVMTPIFSPERTVVHQLKTLALDPEDIDVVICSHLHPDHCGCNAYFRRATILCH 120 Query: 121 ARELEAARQEDAVKFGFLPVDWKQPMPIKAIEGEHDLFNDGRIVLIPVPGHTAGMTAAMV 180 E +AA A G+L +W QP + EHD+F DGRIVL+P+PGHT GMT A V Sbjct: 121 EAEAQAATASGAENQGYLRGEWDQPQGFQTFNAEHDVFGDGRIVLLPMPGHTPGMTVARV 180 Query: 181 GLDKSGAFLLASDAVALRANLEGDINPRNTWNAELSSRSMEDIRRIESGGATVVFGHDDA 240 L+K G+F+LASDA L+A+++ I PRNTWN EL++ ++ ++ + GA+++FGHDDA Sbjct: 181 ELEKDGSFILASDAAPLQASVDTGIAPRNTWNIELAAEALARLKALRERGASIIFGHDDA 240 Query: 241 QWNSLKKGVEFYD 253 QW L+KGVEFY+ Sbjct: 241 QWQELRKGVEFYE 253 >ref|YP_002825141.1| putative beta-lactamase-like protein [Sinorhizobium fredii NGR234] gb|ACP24388.1| putative beta-lactamase-like protein [Sinorhizobium fredii NGR234] Length = 253 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/253 (54%), Positives = 182/253 (71%) Query: 1 MKMHVLSGGRLRMKKSVYLPDADRQETIELPVSCFLLRHPQGNVLFDTGCHPSTATEPEA 60 MKMH L+GGRLRM++SV++P ++ETIELPV L+RH QGNVLFDTGC+P AT+PEA Sbjct: 1 MKMHFLAGGRLRMRRSVFVPGVGKEETIELPVHATLIRHRQGNVLFDTGCNPEAATDPEA 60 Query: 61 RWGSMAKAMVPISRPEENVVDQLKLIGFTPDDIDVVVNSHFHSDHCGCNEFFKKATVVCH 120 RWG +AK M PI PE+ VV QL +G DIDVV+ SH H DHCGCN++F +AT++CH Sbjct: 61 RWGGLAKVMTPIFDPEQTVVRQLAALGLEAGDIDVVICSHLHPDHCGCNQYFGRATILCH 120 Query: 121 ARELEAARQEDAVKFGFLPVDWKQPMPIKAIEGEHDLFNDGRIVLIPVPGHTAGMTAAMV 180 E+ AA+ + A G+L +W QP + EHD+F DG IVL+P+PGHT GMT A V Sbjct: 121 EAEVAAAKTDAAENQGYLKPEWDQPQGFQTFGAEHDVFGDGHIVLLPMPGHTPGMTVAHV 180 Query: 181 GLDKSGAFLLASDAVALRANLEGDINPRNTWNAELSSRSMEDIRRIESGGATVVFGHDDA 240 L SG F+LASDA L+AN++ + PRNTWN EL++ ++ ++ GAT+V GHD+A Sbjct: 181 SLRDSGTFVLASDAAPLQANIDAGVAPRNTWNMELAAAALARLKAFRDKGATIVSGHDEA 240 Query: 241 QWNSLKKGVEFYD 253 QW +L+KG EFY+ Sbjct: 241 QWQALRKGGEFYE 253 >gb|AEJ26983.1| Putative beta-lactamase [Paracoccus denitrificans SD1] Length = 253 Score = 264 bits (675), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 130/252 (51%), Positives = 175/252 (69%) Query: 1 MKMHVLSGGRLRMKKSVYLPDADRQETIELPVSCFLLRHPQGNVLFDTGCHPSTATEPEA 60 M+M VLSGGRL+M+KS+Y+P +++ +ELPV LLRHP GNVLFDTGC P A +P Sbjct: 1 MRMDVLSGGRLKMRKSIYMPAESKEDMVELPVVSVLLRHPSGNVLFDTGCAPQAAEDPSG 60 Query: 61 RWGSMAKAMVPISRPEENVVDQLKLIGFTPDDIDVVVNSHFHSDHCGCNEFFKKATVVCH 120 RWG +AK M PI P++ VV+QL G +DIDVV+ SH H DHCGCN F +ATV+ H Sbjct: 61 RWGGLAKVMQPIFAPQDAVVNQLPRHGLAAEDIDVVICSHLHPDHCGCNAAFARATVIAH 120 Query: 121 ARELEAARQEDAVKFGFLPVDWKQPMPIKAIEGEHDLFNDGRIVLIPVPGHTAGMTAAMV 180 A EL AAR E A K G+LP +W P I+GE DLF+DGRIVL+P+PGH+ G+T + Sbjct: 121 AAELAAARAEGAEKQGYLPQEWDIPQGYSEIDGERDLFDDGRIVLLPLPGHSPGLTGTRI 180 Query: 181 GLDKSGAFLLASDAVALRANLEGDINPRNTWNAELSSRSMEDIRRIESGGATVVFGHDDA 240 LD+ GAFLLASDA + +++ P+N+W+ +L+ +S+ +I+ + GATV+ GHDDA Sbjct: 181 ELDRDGAFLLASDAAPMMCHVDQGYAPKNSWDMDLAVKSLAEIKAQKDRGATVICGHDDA 240 Query: 241 QWNSLKKGVEFY 252 QW L + E + Sbjct: 241 QWQELSQREEGF 252 >ref|ZP_03524531.1| probable beta-lactamase like protein [Rhizobium etli GR56] Length = 167 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 86/164 (52%), Positives = 119/164 (72%) Query: 90 PDDIDVVVNSHFHSDHCGCNEFFKKATVVCHARELEAARQEDAVKFGFLPVDWKQPMPIK 149 P+DIDVV+ SH H DHCGCN +F++AT++CH E +AA A G+L +W QP + Sbjct: 4 PEDIDVVICSHLHPDHCGCNAYFRRATILCHEAEAQAATASGAENQGYLRGEWDQPQGFQ 63 Query: 150 AIEGEHDLFNDGRIVLIPVPGHTAGMTAAMVGLDKSGAFLLASDAVALRANLEGDINPRN 209 EHD+F DGRIVL+P+PGHT GMT A V L+K G+F+LASDA L+A+++ I PRN Sbjct: 64 TFNAEHDVFGDGRIVLLPMPGHTPGMTVARVELEKDGSFILASDAAPLQASVDTGIAPRN 123 Query: 210 TWNAELSSRSMEDIRRIESGGATVVFGHDDAQWNSLKKGVEFYD 253 TWN EL++ ++ ++ + GA+++FGHDDAQW L+KGVEFY+ Sbjct: 124 TWNIELAAEALARLKALRERGASIIFGHDDAQWQELRKGVEFYE 167