BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0165.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08272539.1| ABC-type branched-chain amino acid transport ... 466 e-129 ref|YP_003778161.1| amino acid ABC transporter permease [Herbasp... 464 e-128 ref|YP_004755051.1| branched-chain amino acid ABC transporter pe... 462 e-128 ref|ZP_01914816.1| ABC-type transporter, permease component [Lim... 452 e-125 ref|YP_297569.1| inner-membrane translocator [Ralstonia eutropha... 451 e-125 >ref|ZP_08272539.1| ABC-type branched-chain amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] gb|EGF33987.1| ABC-type branched-chain amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 320 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 235/319 (73%), Positives = 269/319 (84%) Query: 1 MNKILILVVALVLALVAPYVLYPVFLMKLLCFALFACAFNLLTGFTGLLSFGHAAFFGSA 60 MNK + V+ L L AP+ LYPVFLMK+LCFALFACAFNLL GFTGLLSFGHAAFFG A Sbjct: 1 MNKKIGYVIVLAALLAAPFWLYPVFLMKVLCFALFACAFNLLIGFTGLLSFGHAAFFGGA 60 Query: 61 GYVAGHALKVWGVPFEAGILIGTASAAAIAFVVGGLAIRRQGIYFTMITLALAQMLFFVF 120 GYVAG+A+ G+P E GIL+GT + A I +G AIRRQGIYFTMITLALAQML+FVF Sbjct: 61 GYVAGYAMATLGLPPEVGILLGTLAGALIGLFMGSFAIRRQGIYFTMITLALAQMLYFVF 120 Query: 121 LQAPFTGGEDGLQGIPRGKLLGSIDLNNDLTMYYLVVCIVSIAFALIVRTVHSPFGQILK 180 LQA FTGGEDGLQG+PRGKLLG IDL+NDLT+YY+V+ I FA+I+R VHS FGQ+LK Sbjct: 121 LQAKFTGGEDGLQGVPRGKLLGFIDLSNDLTLYYVVMLIAVGGFAVIMRVVHSHFGQVLK 180 Query: 181 AIKENEARAISLGYDVDRYKLLAFVLSGALAGLAGATKAVVLGFETLTDVHWSMSGLVVL 240 AIKENE RAISLGYDVDRYKLLAFVLS L+GLAGATK +VLGFETLTDVHWSMSGLVVL Sbjct: 181 AIKENEPRAISLGYDVDRYKLLAFVLSAGLSGLAGATKTLVLGFETLTDVHWSMSGLVVL 240 Query: 241 MTLVGGLGTKTGPIIGAILIISLENKLGELGDGLASLTGVEWFRALGESVTIVTGLIFIV 300 MTLVGGLGT +GPI+GA++II+LENKLG G LA+ T +EWFR +G+SVTIV GLIFI+ Sbjct: 241 MTLVGGLGTLSGPIVGAVIIIALENKLGSYGTWLANFTSIEWFRTIGQSVTIVIGLIFII 300 Query: 301 CVLAFRRGIVGEIGGLIRK 319 CVLAFRRGIVGE+ ++ Sbjct: 301 CVLAFRRGIVGELAARFKR 319 >ref|YP_003778161.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ66253.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 326 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 240/323 (74%), Positives = 276/323 (85%) Query: 1 MNKILILVVALVLALVAPYVLYPVFLMKLLCFALFACAFNLLTGFTGLLSFGHAAFFGSA 60 MNK + + V L+L L AP+ +YPVFLMK+LCFALFACAFNLL G+TGLLSFGHAAF G A Sbjct: 1 MNKKIGIAVLLILLLAAPFGIYPVFLMKMLCFALFACAFNLLIGYTGLLSFGHAAFLGWA 60 Query: 61 GYVAGHALKVWGVPFEAGILIGTASAAAIAFVVGGLAIRRQGIYFTMITLALAQMLFFVF 120 GY+ G ALKVWG+P E G++IGT + A I V+G LAIRRQGIYFTMITLALAQMLFFV Sbjct: 61 GYMCGQALKVWGLPTELGLIIGTLTGALIGLVMGLLAIRRQGIYFTMITLALAQMLFFVA 120 Query: 121 LQAPFTGGEDGLQGIPRGKLLGSIDLNNDLTMYYLVVCIVSIAFALIVRTVHSPFGQILK 180 LQAPFTGGEDGLQG+PRGKLLG ++L +D+T+YY+V+ I FALIVRT+HSPFGQ+LK Sbjct: 121 LQAPFTGGEDGLQGVPRGKLLGFLNLESDMTLYYVVLAIAVAGFALIVRTIHSPFGQVLK 180 Query: 181 AIKENEARAISLGYDVDRYKLLAFVLSGALAGLAGATKAVVLGFETLTDVHWSMSGLVVL 240 AIKENE RAISLGYDV RYKLLAFVLS L+GLAGATK +VLGFETLTDVHWSMSGLVVL Sbjct: 181 AIKENEPRAISLGYDVARYKLLAFVLSAGLSGLAGATKTLVLGFETLTDVHWSMSGLVVL 240 Query: 241 MTLVGGLGTKTGPIIGAILIISLENKLGELGDGLASLTGVEWFRALGESVTIVTGLIFIV 300 MTLVGGLGT GPI+GA++II LENKLG++G LAS+T ++WF LG+SVTIVTG IFIV Sbjct: 241 MTLVGGLGTILGPIVGAVIIIMLENKLGDIGAWLASVTHIDWFNTLGDSVTIVTGFIFIV 300 Query: 301 CVLAFRRGIVGEIGGLIRKLRAR 323 CVLAFR+GIVGEI L RK +A Sbjct: 301 CVLAFRKGIVGEILALTRKGQAS 323 >ref|YP_004755051.1| branched-chain amino acid ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK64228.1| ABC-type branched-chain amino acid transport system, permease component [Collimonas fungivorans Ter331] Length = 335 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 229/302 (75%), Positives = 266/302 (88%) Query: 18 PYVLYPVFLMKLLCFALFACAFNLLTGFTGLLSFGHAAFFGSAGYVAGHALKVWGVPFEA 77 P+ +YPVFLMK++CFALFACAFNLL GFTGLLSFGHAAFFG AGY+AG+AL+ G+P E Sbjct: 29 PFGIYPVFLMKIICFALFACAFNLLIGFTGLLSFGHAAFFGGAGYIAGYALQTLGLPTEV 88 Query: 78 GILIGTASAAAIAFVVGGLAIRRQGIYFTMITLALAQMLFFVFLQAPFTGGEDGLQGIPR 137 G+L GTA+ A I V+G LAIRRQGIYFTMITLALAQML+FV LQ PFTGGEDGLQG+PR Sbjct: 89 GLLAGTATGALIGLVMGSLAIRRQGIYFTMITLALAQMLYFVCLQMPFTGGEDGLQGVPR 148 Query: 138 GKLLGSIDLNNDLTMYYLVVCIVSIAFALIVRTVHSPFGQILKAIKENEARAISLGYDVD 197 G LLG IDL +DLT+YY+V+ I FALI+RTV+SPFGQ+LKAIKENE RAISLGYDV+ Sbjct: 149 GHLLGFIDLGSDLTLYYVVLAIAVAGFALIMRTVNSPFGQVLKAIKENEPRAISLGYDVN 208 Query: 198 RYKLLAFVLSGALAGLAGATKAVVLGFETLTDVHWSMSGLVVLMTLVGGLGTKTGPIIGA 257 RYKLLAFVLS AL+GLAG+TK +VLGFETLTDVHW+MSGLVVLMTLVGGLGT GPI+GA Sbjct: 209 RYKLLAFVLSAALSGLAGSTKTLVLGFETLTDVHWTMSGLVVLMTLVGGLGTIIGPIVGA 268 Query: 258 ILIISLENKLGELGDGLASLTGVEWFRALGESVTIVTGLIFIVCVLAFRRGIVGEIGGLI 317 ++II LENKLG++G+ LAS+T ++WF LGESVTIVTG IFIVCVLAFRRGIVGEI L+ Sbjct: 269 LIIIVLENKLGDIGNWLASVTHIDWFNGLGESVTIVTGFIFIVCVLAFRRGIVGEISALL 328 Query: 318 RK 319 ++ Sbjct: 329 KR 330 >ref|ZP_01914816.1| ABC-type transporter, permease component [Limnobacter sp. MED105] gb|EDM84132.1| ABC-type transporter, permease component [Limnobacter sp. MED105] Length = 328 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 224/296 (75%), Positives = 257/296 (86%) Query: 18 PYVLYPVFLMKLLCFALFACAFNLLTGFTGLLSFGHAAFFGSAGYVAGHALKVWGVPFEA 77 P+ +YPV LMKLLCFALFACAFNLL G+TGLLSFGHAAF G AGY+AG+ ++ G+PFE Sbjct: 20 PFFMYPVLLMKLLCFALFACAFNLLIGYTGLLSFGHAAFLGGAGYIAGYVIRDLGLPFEL 79 Query: 78 GILIGTASAAAIAFVVGGLAIRRQGIYFTMITLALAQMLFFVFLQAPFTGGEDGLQGIPR 137 G+L G A AA + V+G LAIRRQGIYFTMITLALAQML+F+FLQAPFTGGEDGLQGIPR Sbjct: 80 GLLAGVAFAAFLGLVMGALAIRRQGIYFTMITLALAQMLYFIFLQAPFTGGEDGLQGIPR 139 Query: 138 GKLLGSIDLNNDLTMYYLVVCIVSIAFALIVRTVHSPFGQILKAIKENEARAISLGYDVD 197 G LLG +DL++DLT+Y++V+ I +ALIVRTVHSPFGQ+LKAIKENE RAISLGYDVD Sbjct: 140 GTLLGVVDLSDDLTLYFVVLAICIAGYALIVRTVHSPFGQVLKAIKENEPRAISLGYDVD 199 Query: 198 RYKLLAFVLSGALAGLAGATKAVVLGFETLTDVHWSMSGLVVLMTLVGGLGTKTGPIIGA 257 +YKLL FVLS AL+GLAGATKA VLGFETLTDVHW+MSGLVVLMTLVGGLGT GPI+GA Sbjct: 200 KYKLLVFVLSAALSGLAGATKASVLGFETLTDVHWTMSGLVVLMTLVGGLGTLAGPIVGA 259 Query: 258 ILIISLENKLGELGDGLASLTGVEWFRALGESVTIVTGLIFIVCVLAFRRGIVGEI 313 I+II+LEN++GE G +A T + WFR+LGE VTIVTG IFIV VLAFRRGIVGEI Sbjct: 260 IVIIALENRIGEFGTWMAVTTDIAWFRSLGEQVTIVTGFIFIVVVLAFRRGIVGEI 315 >ref|YP_297569.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ62725.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ralstonia eutropha JMP134] Length = 342 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 219/292 (75%), Positives = 259/292 (88%) Query: 22 YPVFLMKLLCFALFACAFNLLTGFTGLLSFGHAAFFGSAGYVAGHALKVWGVPFEAGILI 81 YPVF++K+LCFALFACAFNLL G+TGLLSFGHAAFFG AGY++G A+KVWGV E G+++ Sbjct: 42 YPVFVLKVLCFALFACAFNLLIGYTGLLSFGHAAFFGGAGYISGEAMKVWGVTPEIGLIL 101 Query: 82 GTASAAAIAFVVGGLAIRRQGIYFTMITLALAQMLFFVFLQAPFTGGEDGLQGIPRGKLL 141 GTA AAI +VVG LAIRRQGIYF+MITLALAQMLFF+ LQAPFTGGEDGLQGIPRGKL Sbjct: 102 GTAGGAAIGYVVGSLAIRRQGIYFSMITLALAQMLFFICLQAPFTGGEDGLQGIPRGKLF 161 Query: 142 GSIDLNNDLTMYYLVVCIVSIAFALIVRTVHSPFGQILKAIKENEARAISLGYDVDRYKL 201 G + L++DLT+YY+ + I+ AFALIVRTVHSPFGQILKAIKENE RAISLGYDVDR+KL Sbjct: 162 GVLSLSDDLTLYYVALVIIVAAFALIVRTVHSPFGQILKAIKENEPRAISLGYDVDRFKL 221 Query: 202 LAFVLSGALAGLAGATKAVVLGFETLTDVHWSMSGLVVLMTLVGGLGTKTGPIIGAILII 261 AFVLS AL+GLAG+ KA+VLGFETLTDVHWSMSG V+LMTLVGGLGT +GPI+GA +++ Sbjct: 222 TAFVLSAALSGLAGSIKALVLGFETLTDVHWSMSGSVILMTLVGGLGTLSGPIVGAFVVV 281 Query: 262 SLENKLGELGDGLASLTGVEWFRALGESVTIVTGLIFIVCVLAFRRGIVGEI 313 +LENKLG++G LAS TG +WF +LGESVT+V G IF++CVL FRRGI+GE+ Sbjct: 282 ALENKLGDIGAFLASATGFQWFNSLGESVTMVIGAIFVICVLTFRRGIMGEL 333