BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0164.p (294 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01914817.1| ABC-type transporter, permease component [Lim... 497 e-138 ref|YP_003778162.1| branched-chain amino acid ABC transporter pe... 484 e-135 ref|YP_004755052.1| ABC branched chain amino acid family transpo... 483 e-134 ref|YP_003606675.1| branched-chain amino acid ABC transporter [B... 479 e-133 ref|ZP_08272538.1| ABC branched-chain amino acid family transpor... 474 e-132 >ref|ZP_01914817.1| ABC-type transporter, permease component [Limnobacter sp. MED105] gb|EDM84133.1| ABC-type transporter, permease component [Limnobacter sp. MED105] Length = 294 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 251/294 (85%), Positives = 273/294 (92%) Query: 1 MDIFGIPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAWMG 60 M+IFGIPL A L QLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAF AWMG Sbjct: 1 MEIFGIPLQAFLGQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFFAWMG 60 Query: 61 LSYLGLSYWVMLTVAPLLVALFGIVIEKTMLRWLYKLDHVYGLLLTFGITLMMEGIFRSV 120 ++Y L+YWVML +APLLV FGI+IEKTMLRWLYKLDH+YGLLLTFGITLM+EGIFRS+ Sbjct: 61 MAYFNLNYWVMLLLAPLLVGAFGILIEKTMLRWLYKLDHLYGLLLTFGITLMLEGIFRSI 120 Query: 121 YGVSGQPYAVPEALGGAFNLGFMMLPKYRAWVVLASAVVCLATWYMIEKTRLGAYLRAGT 180 YGVSGQPY+VPEAL GA NLGFM+LP YRAWVV+AS VVC ATW MIEKT+LGA LRAGT Sbjct: 121 YGVSGQPYSVPEALQGATNLGFMILPNYRAWVVVASLVVCFATWIMIEKTKLGALLRAGT 180 Query: 181 ENPKLVEAFGINVPFIVTCTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 ENP+LVEAFGINVP +VT TYGFGVALAAFAGVLAAPVIQ+SPLMGSNLII VFAVVVIG Sbjct: 181 ENPRLVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQISPLMGSNLIITVFAVVVIG 240 Query: 241 GMGSIMGSIFTGLGVGVIEGLTRVFYPELSATVVFIIMAIVLMLRPAGLFGKEK 294 GMGSI+GSI TGL +G++EGLTRVFYPELSATVVFIIMAIVLM+RPAGLFG+EK Sbjct: 241 GMGSILGSIITGLTLGIVEGLTRVFYPELSATVVFIIMAIVLMIRPAGLFGREK 294 >ref|YP_003778162.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ66254.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 294 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 257/294 (87%), Positives = 278/294 (94%) Query: 1 MDIFGIPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAWMG 60 M++FGIPL A+LSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHG LYM+GAFLAWMG Sbjct: 1 MELFGIPLQALLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGTLYMLGAFLAWMG 60 Query: 61 LSYLGLSYWVMLTVAPLLVALFGIVIEKTMLRWLYKLDHVYGLLLTFGITLMMEGIFRSV 120 LSYLGL+YWVML VAP+LV FGIVIEKTMLRWLYKLDH+YGLLLTFGITLM+EGIFRS+ Sbjct: 61 LSYLGLNYWVMLIVAPILVGAFGIVIEKTMLRWLYKLDHLYGLLLTFGITLMIEGIFRSI 120 Query: 121 YGVSGQPYAVPEALGGAFNLGFMMLPKYRAWVVLASAVVCLATWYMIEKTRLGAYLRAGT 180 YGVSGQPY+VP+ L GA NLGFM+LP YRAWVV+AS +VC ATW++IEKTRLGAYLRAGT Sbjct: 121 YGVSGQPYSVPDLLQGATNLGFMVLPNYRAWVVVASLIVCFATWFVIEKTRLGAYLRAGT 180 Query: 181 ENPKLVEAFGINVPFIVTCTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 ENPKLVEAFGINVP +VT TYGFGVALAAFAGVLAAPVIQVSPLMGSNLII VFAVVVIG Sbjct: 181 ENPKLVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIITVFAVVVIG 240 Query: 241 GMGSIMGSIFTGLGVGVIEGLTRVFYPELSATVVFIIMAIVLMLRPAGLFGKEK 294 GMGSI+GSI TGL +G+IEGLTRVFYPELSATVVFIIMAIVLM+RPAGLFGKEK Sbjct: 241 GMGSILGSIITGLVLGLIEGLTRVFYPELSATVVFIIMAIVLMVRPAGLFGKEK 294 >ref|YP_004755052.1| ABC branched chain amino acid family transporter, inner membrane subunit [Collimonas fungivorans Ter331] gb|AEK64229.1| ABC branched chain amino acid family transporter, inner membrane subunit [Collimonas fungivorans Ter331] Length = 294 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 254/294 (86%), Positives = 276/294 (93%) Query: 1 MDIFGIPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAWMG 60 M+IFGIP A++SQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAW+G Sbjct: 1 MEIFGIPFQALMSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAWIG 60 Query: 61 LSYLGLSYWVMLTVAPLLVALFGIVIEKTMLRWLYKLDHVYGLLLTFGITLMMEGIFRSV 120 L+Y L+YWVML +APLLV LFGIVIE+TMLRWLYKLDH+YGLLLTFGITLM+EGIFRS Sbjct: 61 LTYFNLNYWVMLALAPLLVGLFGIVIERTMLRWLYKLDHLYGLLLTFGITLMVEGIFRSF 120 Query: 121 YGVSGQPYAVPEALGGAFNLGFMMLPKYRAWVVLASAVVCLATWYMIEKTRLGAYLRAGT 180 YGVSGQP++VPE L GA +LGFM+LP YRAWVVLAS VC ATW++IEKT+LGAYLRAGT Sbjct: 121 YGVSGQPFSVPELLSGATDLGFMVLPNYRAWVVLASLTVCFATWFVIEKTKLGAYLRAGT 180 Query: 181 ENPKLVEAFGINVPFIVTCTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 ENPKLVEAFG+NVP +VT TYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG Sbjct: 181 ENPKLVEAFGVNVPLMVTLTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 Query: 241 GMGSIMGSIFTGLGVGVIEGLTRVFYPELSATVVFIIMAIVLMLRPAGLFGKEK 294 GMGSIMGSI TGLG+GVIEGLTRVFYPE SATVVFI+MAIVLM+RPAGLFGKEK Sbjct: 241 GMGSIMGSIITGLGLGVIEGLTRVFYPEASATVVFIVMAIVLMIRPAGLFGKEK 294 >ref|YP_003606675.1| branched-chain amino acid ABC transporter [Burkholderia sp. CCGE1002] gb|ADG17164.1| inner-membrane translocator [Burkholderia sp. CCGE1002] Length = 294 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 238/294 (80%), Positives = 268/294 (91%) Query: 1 MDIFGIPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAWMG 60 MDIFG+PLPAMLSQLLLGLVNGSFYA+LSLGLAVIFGLLNVINFAHGAL+M+GA LAWMG Sbjct: 1 MDIFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMG 60 Query: 61 LSYLGLSYWVMLTVAPLLVALFGIVIEKTMLRWLYKLDHVYGLLLTFGITLMMEGIFRSV 120 LSY GL YWVML +APL+V L G+ IE++MLRWLYKLDH+YGLLLTFGITL++EG+F S+ Sbjct: 61 LSYFGLPYWVMLVLAPLIVGLVGVAIERSMLRWLYKLDHLYGLLLTFGITLVIEGVFHSI 120 Query: 121 YGVSGQPYAVPEALGGAFNLGFMMLPKYRAWVVLASAVVCLATWYMIEKTRLGAYLRAGT 180 YG SGQPY VP AL GA NLGFM LP YRAWVV+AS +VC TW++IEKTRLGAYLRAGT Sbjct: 121 YGSSGQPYDVPSALSGATNLGFMYLPNYRAWVVVASLIVCFVTWFVIEKTRLGAYLRAGT 180 Query: 181 ENPKLVEAFGINVPFIVTCTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 ENPKLVEAFG+NVP ++T TYGFGVALAAFAGVLAAPVIQVSPLMG +II VFAVVVIG Sbjct: 181 ENPKLVEAFGVNVPLMITLTYGFGVALAAFAGVLAAPVIQVSPLMGQPMIITVFAVVVIG 240 Query: 241 GMGSIMGSIFTGLGVGVIEGLTRVFYPELSATVVFIIMAIVLMLRPAGLFGKEK 294 GMGSIMGSI TGL +GV+EGLTRV+YPE SATVVF+IMA+VL++RPAGLFG+EK Sbjct: 241 GMGSIMGSILTGLMLGVVEGLTRVYYPEASATVVFVIMALVLLVRPAGLFGREK 294 >ref|ZP_08272538.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF33986.1| ABC branched-chain amino acid family transporter, inner membrane subunit [Oxalobacteraceae bacterium IMCC9480] Length = 294 Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust. Identities = 247/294 (84%), Positives = 272/294 (92%) Query: 1 MDIFGIPLPAMLSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMMGAFLAWMG 60 M+IFG+PL AM+SQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYM+GAF AW+G Sbjct: 1 MEIFGVPLQAMMSQLLLGLVNGSFYAMLSLGLAVIFGLLNVINFAHGALYMLGAFSAWIG 60 Query: 61 LSYLGLSYWVMLTVAPLLVALFGIVIEKTMLRWLYKLDHVYGLLLTFGITLMMEGIFRSV 120 L+Y GL+YW ML V PL+V LFGIVIEKTMLRWLYKLDH+YGLLLTFGITL++EG+ RS+ Sbjct: 61 LTYFGLNYWTMLIVGPLVVGLFGIVIEKTMLRWLYKLDHLYGLLLTFGITLVVEGVLRSI 120 Query: 121 YGVSGQPYAVPEALGGAFNLGFMMLPKYRAWVVLASAVVCLATWYMIEKTRLGAYLRAGT 180 YGVSGQ Y PEAL GA +LGFM+LP YRAW+V+AS VC ATW++IEKTRLGAYLRAGT Sbjct: 121 YGVSGQSYPAPEALSGATDLGFMILPNYRAWIVVASLAVCFATWFVIEKTRLGAYLRAGT 180 Query: 181 ENPKLVEAFGINVPFIVTCTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 ENPKLVEAFGINVP +VT TYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG Sbjct: 181 ENPKLVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQVSPLMGSNLIIVVFAVVVIG 240 Query: 241 GMGSIMGSIFTGLGVGVIEGLTRVFYPELSATVVFIIMAIVLMLRPAGLFGKEK 294 GMGSI+GSI TGL +GVIEG+TRVFYPE SATVVF+IMAIVLM+RPAGLFGKEK Sbjct: 241 GMGSILGSILTGLSLGVIEGMTRVFYPEASATVVFVIMAIVLMIRPAGLFGKEK 294