BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0149.p (429 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001928027.1| major facilitator superfamily protein [Methy... 292 6e-77 ref|YP_002424034.1| major facilitator superfamily protein [Methy... 292 8e-77 ref|YP_002966196.1| tartrate transporter ttuB [methylobacterium ... 291 2e-76 ref|YP_003071320.1| tartrate transporter ttuB [Methylobacterium ... 289 6e-76 ref|YP_001642300.1| major facilitator transporter [Methylobacter... 289 8e-76 >ref|YP_001928027.1| major facilitator superfamily protein [Methylobacterium populi BJ001] gb|ACB83492.1| major facilitator superfamily MFS_1 [Methylobacterium populi BJ001] Length = 430 Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 161/391 (41%), Positives = 233/391 (59%), Gaps = 3/391 (0%) Query: 7 KQLIGLVSKRLQWILLLMMFIAFMDRTNISFVASFMNKDIGLSARQFGWGASLFFVGYLL 66 L G V++RL L+L F A++DR N+ F A MN+D+GLSA +G GA LFF+GY+ Sbjct: 3 DALTGKVARRLLPFLMLCYFFAYLDRVNVGFAAMTMNRDLGLSATAYGLGAGLFFLGYVA 62 Query: 67 FEIPSNLIMARVGARLWLARIMISWGIVSCASAFIVGPNSFYLARFLLGVAEAGFIPGVV 126 FE+PSNLI+ RVGARLW+ARIM++W +VS ++AF+ G SFYL R LLG+AEAGF PG++ Sbjct: 63 FEVPSNLILERVGARLWIARIMVTWSLVSASTAFVTGEWSFYLVRVLLGLAEAGFFPGII 122 Query: 127 LYLSYWVPHRYLGKFTGWFLMIVPISASLTAMLTAVLLGL-DEVLGVTGWRWVFFTEGLP 185 LYL+YW P R G F+M VP+SA++ + L+ +++ L D G+ GW+W++ E P Sbjct: 123 LYLTYWFPARQRAGIVGTFMMAVPLSAAIGSPLSGLVMSLTDGWHGLAGWQWLYLLEAAP 182 Query: 186 AIVVGFFLLRYLADKPASATWLSTDQRTQLQAMVNADQVGKMTETPKLKPALTSPSVWCL 245 ++++G L L D+P +A+WL+ D+R L A + D + T L AL P V L Sbjct: 183 SLLLGLATLFVLTDRPENASWLTADERADLIARMAEDHRSRPHRTAHLGGALLDPRVLGL 242 Query: 246 GGAYFFMNVALGA-QTWYPLSIHLFKLSRPWETASIAIPSAIASLSMLLWAKRSDRGEER 304 G YF ++ L A W P + F + A+P +++ ML W + SDR ER Sbjct: 243 GLVYFGLSTGLYAIGLWLPQIVSAFGFTTTATGFVTAVPYLVSAAGMLAWTRHSDRTGER 302 Query: 305 SWYVIIPALVSALSWYGAAHWINDAFWLPALMSVAYSAMFAALVVFWTIPTRVLSVEARP 364 + +V +P + + + AA + +S A +FAAL FWT+PTR+L+ A Sbjct: 303 TRHVAVPTVAAGFALL-AASQVGTPLLTIVALSAAALGVFAALPTFWTLPTRLLTGSAAA 361 Query: 365 AGLAIITALGLPGSMISLALGGQLRDQLGSF 395 G+A+I ALG G AL G +RD G F Sbjct: 362 GGIALINALGSVGGFAGPALMGWIRDATGRF 392 >ref|YP_002424034.1| major facilitator superfamily protein [Methylobacterium chloromethanicum CM4] gb|ACK86106.1| major facilitator superfamily MFS_1 [Methylobacterium chloromethanicum CM4] Length = 444 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 164/391 (41%), Positives = 237/391 (60%), Gaps = 3/391 (0%) Query: 7 KQLIGLVSKRLQWILLLMMFIAFMDRTNISFVASFMNKDIGLSARQFGWGASLFFVGYLL 66 L V++RL L+L F A++DR N+ F A MN+D+GLSA +G+GA LFF+GY+ Sbjct: 3 DALTSKVARRLLPFLMLCYFFAYLDRVNVGFAALTMNRDLGLSATAYGFGAGLFFLGYVA 62 Query: 67 FEIPSNLIMARVGARLWLARIMISWGIVSCASAFIVGPNSFYLARFLLGVAEAGFIPGVV 126 FE+PSNLI+ RVGARLW+ARIM++W +VS ++A +VG SFYL R LG+AEAGF PG++ Sbjct: 63 FEVPSNLILERVGARLWIARIMVTWSLVSASTALVVGEWSFYLVRIGLGLAEAGFFPGII 122 Query: 127 LYLSYWVPHRYLGKFTGWFLMIVPISASLTAMLTAVLLGL-DEVLGVTGWRWVFFTEGLP 185 LYL+YW P R G F+M VP+SA++ A L+ +++ L D LG+ GW+W++ E P Sbjct: 123 LYLTYWFPARQRAGIVGTFMMAVPLSAAIGAPLSGLVMSLTDGWLGLAGWQWLYLLEAAP 182 Query: 186 AIVVGFFLLRYLADKPASATWLSTDQRTQLQAMVNADQVGKMTETPKLKPALTSPSVWCL 245 ++++G L L D+P A+WL+ ++R L A + D+ T L AL P V L Sbjct: 183 SLLLGIATLFVLTDRPERASWLTAEERASLVARMAEDRRLSPNRTAHLGAALLDPRVLGL 242 Query: 246 GGAYFFMNVALGA-QTWYPLSIHLFKLSRPWETASIAIPSAIASLSMLLWAKRSDRGEER 304 G YF ++ L A W P + F + A+P +++ MLLW + SDR ER Sbjct: 243 GLVYFGLSTGLYAVGLWLPQIVSGFGFTTTATGFVTAVPYIVSAAGMLLWTRHSDRTGER 302 Query: 305 SWYVIIPALVSALSWYGAAHWINDAFWLPALMSVAYSAMFAALVVFWTIPTRVLSVEARP 364 + +V IP + + L+ + A+ + AL +VA +FAAL FWT+PTR+L+ A Sbjct: 303 TRHVAIPTVAAGLALFAASRAGTPLLTIAALSAVAL-GVFAALPTFWTLPTRLLTGSAAA 361 Query: 365 AGLAIITALGLPGSMISLALGGQLRDQLGSF 395 G+A+I ALG G AL G +RD G F Sbjct: 362 GGIALINALGSLGGFAGPALMGWIRDATGRF 392 >ref|YP_002966196.1| tartrate transporter ttuB [methylobacterium extorquens AM1] gb|ACS42919.1| Putative tartrate transporter ttuB [Methylobacterium extorquens AM1] Length = 444 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 163/391 (41%), Positives = 237/391 (60%), Gaps = 3/391 (0%) Query: 7 KQLIGLVSKRLQWILLLMMFIAFMDRTNISFVASFMNKDIGLSARQFGWGASLFFVGYLL 66 L V++RL L+L F A++DR N+ F A MN+D+GLSA +G+GA LFF+GY+ Sbjct: 3 DALTSKVARRLLPFLMLCYFFAYLDRVNVGFAALTMNRDLGLSATAYGFGAGLFFLGYVA 62 Query: 67 FEIPSNLIMARVGARLWLARIMISWGIVSCASAFIVGPNSFYLARFLLGVAEAGFIPGVV 126 FE+PSNLI+ RVGARLW+ARIM++W +VS ++A +VG SFYL R LG+AEAGF PG++ Sbjct: 63 FEVPSNLILERVGARLWIARIMVTWSLVSASTALVVGEWSFYLVRVGLGLAEAGFFPGII 122 Query: 127 LYLSYWVPHRYLGKFTGWFLMIVPISASLTAMLTAVLLGLDEV-LGVTGWRWVFFTEGLP 185 LYL+YW P R G F+M VP+SA++ A L+ +++ L E LG+ GW+W++ E P Sbjct: 123 LYLTYWFPARQRAGIVGTFMMAVPLSAAIGAPLSGLVMSLTEGWLGLAGWQWLYLLEAAP 182 Query: 186 AIVVGFFLLRYLADKPASATWLSTDQRTQLQAMVNADQVGKMTETPKLKPALTSPSVWCL 245 ++++G L L D+P A+WL+ ++RT L A + D+ T L AL P V L Sbjct: 183 SLLLGIATLFVLTDRPERASWLTAEERTSLVARMAEDRRLSPNRTAHLGAALLDPRVLGL 242 Query: 246 GGAYFFMNVALGA-QTWYPLSIHLFKLSRPWETASIAIPSAIASLSMLLWAKRSDRGEER 304 G YF ++ L A W P + F + A+P ++++ ML+W + SDR ER Sbjct: 243 GLVYFGLSTGLYAVGLWLPQIVSGFGFTTTATGFVTAVPYIVSAVGMLVWTRHSDRTGER 302 Query: 305 SWYVIIPALVSALSWYGAAHWINDAFWLPALMSVAYSAMFAALVVFWTIPTRVLSVEARP 364 + +V IP + + L+ + A+ + AL S A +FAAL FWT+PT +L+ A Sbjct: 303 TRHVAIPTVAAGLALFAASRAGTPLLTIAAL-SAAALGVFAALPTFWTLPTHLLTGSAAA 361 Query: 365 AGLAIITALGLPGSMISLALGGQLRDQLGSF 395 G+A+I ALG G AL G +RD G F Sbjct: 362 GGIALINALGSLGGFAGPALMGWIRDATGHF 392 >ref|YP_003071320.1| tartrate transporter ttuB [Methylobacterium extorquens DM4] emb|CAX27518.1| Putative tartrate transporter ttuB [Methylobacterium extorquens DM4] Length = 444 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 163/391 (41%), Positives = 236/391 (60%), Gaps = 3/391 (0%) Query: 7 KQLIGLVSKRLQWILLLMMFIAFMDRTNISFVASFMNKDIGLSARQFGWGASLFFVGYLL 66 L V++RL L+L F A++DR N+ F A MN+D+GLSA +G+GA LFF+GY+ Sbjct: 3 DALTSKVARRLLPFLMLCYFFAYLDRVNVGFAALTMNRDLGLSATAYGFGAGLFFLGYVA 62 Query: 67 FEIPSNLIMARVGARLWLARIMISWGIVSCASAFIVGPNSFYLARFLLGVAEAGFIPGVV 126 FE+PSNLI+ RVGARLW+ARIM++W +VS ++A +VG SFYL R LG+AEAGF PG++ Sbjct: 63 FEVPSNLILERVGARLWIARIMVTWSLVSASTALVVGEWSFYLVRVGLGLAEAGFFPGII 122 Query: 127 LYLSYWVPHRYLGKFTGWFLMIVPISASLTAMLTAVLLGL-DEVLGVTGWRWVFFTEGLP 185 LYL+YW P R G F+M VP+SA++ A L+ +++ L D LG+ GW+W++ E P Sbjct: 123 LYLTYWFPARQRAGIVGTFMMAVPLSAAIGAPLSGLVMSLTDGWLGLAGWQWLYLLEAAP 182 Query: 186 AIVVGFFLLRYLADKPASATWLSTDQRTQLQAMVNADQVGKMTETPKLKPALTSPSVWCL 245 ++++G L L D+P A+WL+ ++R L A + D+ T L AL P V L Sbjct: 183 SLLLGIATLFVLTDRPERASWLTAEERASLVARMAEDRRLSPNRTAHLGAALLDPRVLGL 242 Query: 246 GGAYFFMNVALGA-QTWYPLSIHLFKLSRPWETASIAIPSAIASLSMLLWAKRSDRGEER 304 G YF ++ L A W P + F + A+P +++ ML+W + SDR ER Sbjct: 243 GLVYFGLSTGLYAVGLWLPQIVSGFGFTTTATGFVTAVPYIVSAAGMLVWTRHSDRTGER 302 Query: 305 SWYVIIPALVSALSWYGAAHWINDAFWLPALMSVAYSAMFAALVVFWTIPTRVLSVEARP 364 + +V IP + + L+ + A+ + AL S A +FAAL FWT+PTR+L+ A Sbjct: 303 TRHVAIPTVAAGLALFAASRAGTPILTIAAL-SAAALGVFAALPTFWTLPTRLLTGSAAA 361 Query: 365 AGLAIITALGLPGSMISLALGGQLRDQLGSF 395 G+A+I ALG G AL G +RD G F Sbjct: 362 GGIALINALGSLGGFAGPALMGWIRDATGRF 392 >ref|YP_001642300.1| major facilitator transporter [Methylobacterium extorquens PA1] gb|ABY33229.1| major facilitator superfamily MFS_1 [Methylobacterium extorquens PA1] Length = 444 Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 163/391 (41%), Positives = 235/391 (60%), Gaps = 3/391 (0%) Query: 7 KQLIGLVSKRLQWILLLMMFIAFMDRTNISFVASFMNKDIGLSARQFGWGASLFFVGYLL 66 L V++RL L+L F A++DR N+ F A MN+D+GLSA +G+GA LFF+GY+ Sbjct: 3 DALTSKVARRLLTFLMLCYFFAYLDRVNVGFAALTMNQDLGLSATAYGFGAGLFFLGYVA 62 Query: 67 FEIPSNLIMARVGARLWLARIMISWGIVSCASAFIVGPNSFYLARFLLGVAEAGFIPGVV 126 FE+PSNLI+ RVGARLW+ARIM++W +VS ++A +VG SFYL R LG+AEAGF PG++ Sbjct: 63 FEVPSNLILDRVGARLWIARIMVTWSLVSASTALVVGEWSFYLVRVGLGLAEAGFFPGII 122 Query: 127 LYLSYWVPHRYLGKFTGWFLMIVPISASLTAMLTAVLLGL-DEVLGVTGWRWVFFTEGLP 185 LYL+YW P R G F+M VP+SA++ A L+ +++ L D LG+ GW+W++ E P Sbjct: 123 LYLTYWFPARQRAGIVGTFMMAVPLSAAIGAPLSGLVMSLTDGWLGLAGWQWLYLLEAAP 182 Query: 186 AIVVGFFLLRYLADKPASATWLSTDQRTQLQAMVNADQVGKMTETPKLKPALTSPSVWCL 245 ++++G L L D+P A+WL+ +R L A + D+ T L AL P V L Sbjct: 183 SLLLGIATLFVLTDRPERASWLTAKERASLVARMAEDRRLSPNRTAHLGAALLDPRVLGL 242 Query: 246 GGAYFFMNVALGA-QTWYPLSIHLFKLSRPWETASIAIPSAIASLSMLLWAKRSDRGEER 304 G YF ++ L A W P + F + A+P +++ ML+W + SDR ER Sbjct: 243 GLVYFGLSTGLYAVGLWLPQIVSGFGFTTTATGFVTAVPYIVSAAGMLVWTRHSDRTGER 302 Query: 305 SWYVIIPALVSALSWYGAAHWINDAFWLPALMSVAYSAMFAALVVFWTIPTRVLSVEARP 364 + +V IP + + L+ + A+ + AL S A +FAAL FWT+PTR+L+ A Sbjct: 303 TRHVAIPTVAAGLALFAASRAGTPILTIAAL-SAAALGVFAALPTFWTLPTRLLTGSAAA 361 Query: 365 AGLAIITALGLPGSMISLALGGQLRDQLGSF 395 G+A+I ALG G AL G +RD G F Sbjct: 362 GGIALINALGSLGGFAGPALMGWIRDATGRF 392