BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0135.p (281 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_293399.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxyl... 431 e-119 ref|YP_004682701.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarbo... 355 4e-96 ref|YP_298871.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxyl... 345 5e-93 ref|YP_003979155.1| fumarylacetoacetate hydrolase [Achromobacter... 345 6e-93 ref|YP_002822633.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarbo... 322 4e-86 >ref|YP_293399.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Ralstonia eutropha JMP134] gb|AAZ65542.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Ralstonia eutropha JMP134] Length = 281 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/280 (74%), Positives = 234/280 (83%) Query: 1 MRYVSVLYQGKKALGVRESKGIRIIGDESLEELLARGVGLKSYGDTFKEGVVVTEKDITY 60 MRYVS GKK LG+RE + IR++G +LE+LL+RGV L +YG G V+ I Y Sbjct: 1 MRYVSFFKDGKKYLGIREGEVIRVLGQTTLEDLLSRGVNLDAYGRDEASGETVSSAGIIY 60 Query: 61 LPPLSRPPKIICVGLNYADHTKESNFAQPDYPTLFFRVNTSLVAHAEPMIRPAVKDSEGL 120 LPPLSRPPKIICVGLNYADHTKES + QPDYPTLFFRV+TSLVAH +P++RPAV D GL Sbjct: 61 LPPLSRPPKIICVGLNYADHTKESPYDQPDYPTLFFRVHTSLVAHGQPLVRPAVDDCAGL 120 Query: 121 DFEGEIAAVIGKGGRHIAPADALSHVAGYSLFNDGSVREYQFKTPQWTVGKNFDATGAFG 180 DFEGE+A V+GKGGRHI DALSHVAGYSLFNDGSVREYQFK PQWTVGKNFD +GAFG Sbjct: 121 DFEGEVAVVLGKGGRHIRKEDALSHVAGYSLFNDGSVREYQFKAPQWTVGKNFDGSGAFG 180 Query: 181 PDLVTADELPAGAKGLRLETILNGQVVQSASTDEMVFDVATVISIVSQAITLEPGDVIVT 240 PDLVTADELP GA+GL L+T LNGQVVQSASTD+M+FDV T+I+I+SQAITLE GDVIV+ Sbjct: 181 PDLVTADELPPGARGLLLQTKLNGQVVQSASTDDMIFDVETLIAIISQAITLEAGDVIVS 240 Query: 241 GTPSGIGWARSPKLLMKAGDVCEVRVEGIGTLRNVIEDEA 280 GTP+GIGWAR PKLLMK GDVCEV VE IGTL N I DEA Sbjct: 241 GTPAGIGWAREPKLLMKQGDVCEVIVEKIGTLSNPIVDEA 280 >ref|YP_004682701.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Cupriavidus necator N-1] gb|AEI82853.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Cupriavidus necator N-1] Length = 287 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 175/284 (61%), Positives = 219/284 (77%), Gaps = 6/284 (2%) Query: 1 MRYVSVLYQGKKALGVRESKGIRIIGDESLEE---LLARGVGLKSYGDTFKEGVVVTEKD 57 M+ + L G+ +GV + G+ + + + + L+A G + + + + V + D Sbjct: 1 MKLATFLLDGRARVGVVSADGVLALPEAAGNDVCALVAVGTDSERWRALYAQATPVADAD 60 Query: 58 -ITYLPPLSRPPKIICVGLNYADHTKESNFAQPDYPTLFFRVNTSLVAHAEPMIRPAVKD 116 +T+LPP+ RPPKI+CVGLNYADHTKES + QPDYPTLF RV TSLV H ++RP V D Sbjct: 61 SLTWLPPVGRPPKILCVGLNYADHTKESPYEQPDYPTLFLRVATSLVGHNGAIVRPLVSD 120 Query: 117 SEGLDFEGEIAAVIGKGGRHIAPADALSHVAGYSLFNDGSVREYQFKTPQWTVGKNFDAT 176 S LD+EGE+A +IGKGGRHIA +AL HV GYS+FNDGSVREYQFK+PQWTVGKNFDAT Sbjct: 121 S--LDYEGELAVIIGKGGRHIAREEALGHVFGYSIFNDGSVREYQFKSPQWTVGKNFDAT 178 Query: 177 GAFGPDLVTADELPAGAKGLRLETILNGQVVQSASTDEMVFDVATVISIVSQAITLEPGD 236 G FGP +VTADELP GA GL+LET LNGQ+VQSAST +M++DVA++I+I+S+AITLEPGD Sbjct: 179 GGFGPFVVTADELPPGAAGLQLETRLNGQMVQSASTSDMLYDVASLIAIISEAITLEPGD 238 Query: 237 VIVTGTPSGIGWARSPKLLMKAGDVCEVRVEGIGTLRNVIEDEA 280 VIV GTPSGIGWAR P+LLM+ GDVCEV +EGIGTL N I DE+ Sbjct: 239 VIVAGTPSGIGWARKPQLLMRHGDVCEVSIEGIGTLSNPIFDES 282 >ref|YP_298871.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Ralstonia eutropha JMP134] gb|AAZ64027.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Ralstonia eutropha JMP134] Length = 284 Score = 345 bits (885), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 172/283 (60%), Positives = 214/283 (75%), Gaps = 6/283 (2%) Query: 1 MRYVSVLYQGKKALGVRESKGIRI---IGDESLEELLARGVGLKSYGDTFKEGVVVTEKD 57 M+ + L G++ +G+ +G+ + + + L+ G G + + + V + + Sbjct: 1 MKLATFLLDGQQRVGLVSDEGVFALPPVAGKDVGALIDAGFGPQQWHSLVAQAVPLRDTA 60 Query: 58 -ITYLPPLSRPPKIICVGLNYADHTKESNFAQPDYPTLFFRVNTSLVAHAEPMIRPAVKD 116 +T+LPP+ P KI+CVGLNYADHTKES + QPDYPTLF RV TS+V H ++RP D Sbjct: 61 ALTWLPPVISPRKILCVGLNYADHTKESPYEQPDYPTLFLRVPTSMVGHDCAIVRPLASD 120 Query: 117 SEGLDFEGEIAAVIGKGGRHIAPADALSHVAGYSLFNDGSVREYQFKTPQWTVGKNFDAT 176 + LD+EGE+A VIGKGG+HIA DALSHV GYS+FNDGSVREYQFK+PQWTVGKNFDAT Sbjct: 121 T--LDYEGELAVVIGKGGKHIAREDALSHVFGYSVFNDGSVREYQFKSPQWTVGKNFDAT 178 Query: 177 GAFGPDLVTADELPAGAKGLRLETILNGQVVQSASTDEMVFDVATVISIVSQAITLEPGD 236 G FGP +VTADELP GA GLRLET LNGQVVQSAST +M++DVA++I+I+S+AITLEPGD Sbjct: 179 GGFGPYVVTADELPPGATGLRLETRLNGQVVQSASTSDMLYDVASLIAIISEAITLEPGD 238 Query: 237 VIVTGTPSGIGWARSPKLLMKAGDVCEVRVEGIGTLRNVIEDE 279 VIV GTPSGIGWAR PKLLM+ GDVCEV +E IGTL N I DE Sbjct: 239 VIVAGTPSGIGWAREPKLLMRHGDVCEVSIERIGTLSNPIADE 281 >ref|YP_003979155.1| fumarylacetoacetate hydrolase [Achromobacter xylosoxidans A8] gb|ADP16440.1| fumarylacetoacetate (FAA) hydrolase family protein 5 [Achromobacter xylosoxidans A8] Length = 279 Score = 345 bits (884), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 165/277 (59%), Positives = 209/277 (75%), Gaps = 3/277 (1%) Query: 1 MRYVSVLYQGKKALGVRESKGIRIIGDESLEELLARGVGLKSYG-DTFKEGVVVTEKDIT 59 M+++ + ++ LG++E + +G L +LL + L ++ + G ++I Sbjct: 1 MKFIRFSHGNEQHLGIQEGDQVVSLGQHELLDLLRQKADLSAFARERAASGKRYALQEIQ 60 Query: 60 YLPPLSRPPKIICVGLNYADHTKESNFAQPDYPTLFFRVNTSLVAHAEPMIRPAVKDSEG 119 YLPPL+ P KIIC+GLNY DHT ES F QP YPT+F R N+SL+AH +PMIRP K S+ Sbjct: 61 YLPPLANPGKIICIGLNYLDHTAESKFEQPAYPTVFNRFNSSLIAHEQPMIRP--KSSDS 118 Query: 120 LDFEGEIAAVIGKGGRHIAPADALSHVAGYSLFNDGSVREYQFKTPQWTVGKNFDATGAF 179 LD+EGE+A V+ GGR+I+ DAL HVAGYS+FNDGSVREYQFK+PQWTVGKNFD TG F Sbjct: 119 LDYEGELAVVLSGGGRYISKEDALKHVAGYSVFNDGSVREYQFKSPQWTVGKNFDGTGGF 178 Query: 180 GPDLVTADELPAGAKGLRLETILNGQVVQSASTDEMVFDVATVISIVSQAITLEPGDVIV 239 GP LVTADELP G GL LET LNG+VVQSA+T +MVFDVAT+I+++S+A TLE GDVIV Sbjct: 179 GPALVTADELPPGGAGLALETRLNGKVVQSANTRDMVFDVATLIALLSEAFTLEAGDVIV 238 Query: 240 TGTPSGIGWARSPKLLMKAGDVCEVRVEGIGTLRNVI 276 GTPSG+GWAR P+LLM+ GDVCEV +EG+GTLRN I Sbjct: 239 AGTPSGVGWAREPRLLMQDGDVCEVSIEGVGTLRNPI 275 >ref|YP_002822633.1| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Sinorhizobium fredii NGR234] gb|AAQ87342.1| Fumarylacetoacetate hydrolase family protein [Sinorhizobium fredii NGR234] gb|ACP21880.1| putative 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase [Sinorhizobium fredii NGR234] Length = 291 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 153/243 (62%), Positives = 193/243 (79%), Gaps = 2/243 (0%) Query: 37 GVGLKSYGDTFKEGVVVTEKDITYLPPLSRPPKIICVGLNYADHTKESNFAQPDYPTLFF 96 G L GD +V ++ LPP+ RP KI+CVGLNYADHT+ES + QPD+PTLF Sbjct: 44 GEALWLAGDRLSREPIVDLANVDLLPPILRPGKIVCVGLNYADHTEESGYKQPDHPTLFP 103 Query: 97 RVNTSLVAHAEPMIRPAVKDSEGLDFEGEIAAVIGKGGRHIAPADALSHVAGYSLFNDGS 156 R +SL+A EP++RP V SE LDFEGE+ AVIG+ GRHI+ DAL HVAGYS+FND S Sbjct: 104 RFTSSLIAAGEPIVRPFV--SETLDFEGELVAVIGRRGRHISKHDALDHVAGYSIFNDAS 161 Query: 157 VREYQFKTPQWTVGKNFDATGAFGPDLVTADELPAGAKGLRLETILNGQVVQSASTDEMV 216 +RE+Q +TPQWT+GKNFD TG+FGP VTADELP GA GLR+ET LNG+VVQ+++TD+++ Sbjct: 162 IREFQHRTPQWTLGKNFDGTGSFGPWFVTADELPRGAAGLRIETRLNGEVVQASNTDQLI 221 Query: 217 FDVATVISIVSQAITLEPGDVIVTGTPSGIGWARSPKLLMKAGDVCEVRVEGIGTLRNVI 276 FDVAT++S +S+AITLEPGD+IVTGTPSGIG AR+P+L M+AGDV EV ++ IGTLRN + Sbjct: 222 FDVATLVSTISEAITLEPGDLIVTGTPSGIGHARNPRLYMRAGDVVEVEIQSIGTLRNPV 281 Query: 277 EDE 279 DE Sbjct: 282 VDE 284