BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0129.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03588598.1| 5-carboxymethyl-2-hydroxymuconate delta-isome... 447 e-124 gb|ABD64512.1| putative maleylpyruvate isomerase [Pseudomonas al... 382 e-104 ref|YP_004682879.1| 5-carboxymethyl-2-hydroxymuconate delta-isom... 362 5e-98 ref|YP_001630034.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomeras... 356 3e-96 ref|YP_982700.1| 5-carboxymethyl-2-hydroxymuconate delta-isomera... 351 8e-95 >ref|ZP_03588598.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Burkholderia multivorans CGD1] gb|EED96949.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Burkholderia multivorans CGD1] Length = 289 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 215/284 (75%), Positives = 246/284 (86%) Query: 1 MKICRFDDNRLGLVEGDVVRDVTVALEILPAHTYPFPRYDLLVANLPALVDRINALKSDA 60 MKICRF++NRLG+VEG++VRDVT ALE+LP YPFPR+D+L+A+L + L A Sbjct: 1 MKICRFNENRLGVVEGNIVRDVTEALELLPPAAYPFPRHDVLIAHLDQIRRLAAELAPQA 60 Query: 61 EVLPLSSVRLLSPVANPGKVIAAPVNYQKHLKEVLDDPNLHHDNQINHIERAGLFLKATS 120 + +PL+ VRLLSPVANPGK+IAAPVNYQKHLKEVL DPNLHHDNQIN I+RAGLFLKATS Sbjct: 61 QSVPLADVRLLSPVANPGKIIAAPVNYQKHLKEVLGDPNLHHDNQINQIQRAGLFLKATS 120 Query: 121 SVVGASEGVALRKLDRRNDHEVELAVVIGKRAANVSRADALNYVAGYCIGLDITIRGPEE 180 S+VG SEGVALR LDRRNDHEVELAVVIGK AANVSR DAL YVAGYCIGLDITIRGPEE Sbjct: 121 SLVGPSEGVALRMLDRRNDHEVELAVVIGKTAANVSREDALQYVAGYCIGLDITIRGPEE 180 Query: 181 RSFRKSPDTYTVFGPWLVTADEITEPGKLDFSIAVNGEIRQQSNTADLILGVEQLIEFAS 240 RSFRKSPD+YTV GPWLVT+DE+ + G LDFSI+VNGE RQ+SNT +LILGV +LIEFAS Sbjct: 181 RSFRKSPDSYTVLGPWLVTSDELPDAGNLDFSISVNGETRQKSNTNELILGVRELIEFAS 240 Query: 241 GFYTLEPGDIIITGTPEGVASIKPGDKMLARMEGIGEMAVAVRA 284 FYTL+PGD+IITGTPEGVASI+PGD M A ++ IG M VAVR+ Sbjct: 241 SFYTLQPGDVIITGTPEGVASIQPGDTMFAEIDRIGSMTVAVRS 284 >gb|ABD64512.1| putative maleylpyruvate isomerase [Pseudomonas alcaligenes] Length = 287 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/286 (63%), Positives = 227/286 (79%), Gaps = 2/286 (0%) Query: 1 MKICRFDDNRLGLVEGDVVRDVTVALEILPAHTYPFPRYDLLVANLPALVDRINALKSDA 60 MKICRF++NRLG+V+GD V DVT AL +LP++ YP P YD L+ +L AL+ RI L DA Sbjct: 1 MKICRFNENRLGVVDGDEVLDVTEALSVLPSYEYPLPGYDPLIKHLDALLARIETLIKDA 60 Query: 61 EVLPLSSVRLLSPVANPGKVIAAPVNYQKHLKEVLDDPNLHHD--NQINHIERAGLFLKA 118 + L+ VRLLSPVANPGK+IAAP+NY +HL+EVL D +++ + HI+++GLFLKA Sbjct: 61 PRILLADVRLLSPVANPGKIIAAPINYTRHLQEVLADSAINNGVASFTQHIKKSGLFLKA 120 Query: 119 TSSVVGASEGVALRKLDRRNDHEVELAVVIGKRAANVSRADALNYVAGYCIGLDITIRGP 178 SS+ GA EGVAL DRRNDHEVELA+VIGK A NV R +L YVAGYCIG+D+T+RGP Sbjct: 121 NSSLAGAGEGVALSHQDRRNDHEVELAIVIGKTARNVPREKSLEYVAGYCIGIDMTVRGP 180 Query: 179 EERSFRKSPDTYTVFGPWLVTADEITEPGKLDFSIAVNGEIRQQSNTADLILGVEQLIEF 238 EERSFRKSPD+YT+ GPWLVT DEI PG+L S+ VNGE+RQ +NT+DLILGVE+L+EF Sbjct: 181 EERSFRKSPDSYTILGPWLVTRDEIDSPGELQMSLKVNGEVRQNANTSDLILGVEELVEF 240 Query: 239 ASGFYTLEPGDIIITGTPEGVASIKPGDKMLARMEGIGEMAVAVRA 284 AS FYTL PGD+II+GTPEGV + PGD MLA +E IG M +A+R+ Sbjct: 241 ASSFYTLHPGDVIISGTPEGVGPVNPGDAMLAEIERIGTMTIAIRS 286 >ref|YP_004682879.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Cupriavidus necator N-1] gb|AEI83031.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Cupriavidus necator N-1] Length = 286 Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 172/282 (60%), Positives = 212/282 (75%) Query: 1 MKICRFDDNRLGLVEGDVVRDVTVALEILPAHTYPFPRYDLLVANLPALVDRINALKSDA 60 M +CRFDD+RLG+VE D V DVT ALE+LP H YP PR D L+ANL A+ +RI L+ A Sbjct: 1 MYLCRFDDDRLGVVEADTVFDVTPALEVLPTHRYPLPRVDPLIANLAAVRERIAGLRDGA 60 Query: 61 EVLPLSSVRLLSPVANPGKVIAAPVNYQKHLKEVLDDPNLHHDNQINHIERAGLFLKATS 120 L L+ V LL PVANPGK+IAAPVNY HL E L P +HH N+IN I +AGLFLKATS Sbjct: 61 PRLRLADVELLCPVANPGKIIAAPVNYVDHLHEGLSQPEIHHGNKINEISQAGLFLKATS 120 Query: 121 SVVGASEGVALRKLDRRNDHEVELAVVIGKRAANVSRADALNYVAGYCIGLDITIRGPEE 180 S+VG S GV ++ +RRNDHE+EL VIGK N+ +ADAL+YVAGYC+GLD+T+RGPEE Sbjct: 121 SLVGPSHGVFIQHPERRNDHEIELVAVIGKSGRNIPQADALSYVAGYCVGLDMTVRGPEE 180 Query: 181 RSFRKSPDTYTVFGPWLVTADEITEPGKLDFSIAVNGEIRQQSNTADLILGVEQLIEFAS 240 RS RKS D+Y+V GPWL TAD + +P L S+ VNGE RQ+ NT++LI+G+ QLI FAS Sbjct: 181 RSMRKSIDSYSVVGPWLATADAVADPSNLTLSVTVNGEHRQRENTSNLIMGIAQLIAFAS 240 Query: 241 GFYTLEPGDIIITGTPEGVASIKPGDKMLARMEGIGEMAVAV 282 FYTL PGDI+ TGTP GV +K GD++ A +EG+G M V V Sbjct: 241 SFYTLYPGDILFTGTPAGVGPVKSGDRLTASVEGVGRMEVKV 282 >ref|YP_001630034.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bordetella petrii DSM 12804] emb|CAP41764.1| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [Bordetella petrii] Length = 284 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 172/282 (60%), Positives = 213/282 (75%) Query: 1 MKICRFDDNRLGLVEGDVVRDVTVALEILPAHTYPFPRYDLLVANLPALVDRINALKSDA 60 M++C F++N+LG+ E D +RDV+ L LPA YP PR+DLL+A LPAL I +DA Sbjct: 1 MRLCLFNNNQLGVAEADGIRDVSSVLASLPAQHYPLPRHDLLIAALPALRPEIEKAAADA 60 Query: 61 EVLPLSSVRLLSPVANPGKVIAAPVNYQKHLKEVLDDPNLHHDNQINHIERAGLFLKATS 120 +LP S VRLLSPVANPGK++AAPVNY++HL E + +P + I+ GLFLKATS Sbjct: 61 PLLPFSEVRLLSPVANPGKIVAAPVNYKRHLDEAIAEPETFSRAHVRQIQETGLFLKATS 120 Query: 121 SVVGASEGVALRKLDRRNDHEVELAVVIGKRAANVSRADALNYVAGYCIGLDITIRGPEE 180 S+VG SEGV++R +RR DHE+ELAVVIGKR V AL+YVAGY IGLDIT+RGPEE Sbjct: 121 SLVGPSEGVSIRFPERRTDHEIELAVVIGKRCDRVDTEKALDYVAGYSIGLDITVRGPEE 180 Query: 181 RSFRKSPDTYTVFGPWLVTADEITEPGKLDFSIAVNGEIRQQSNTADLILGVEQLIEFAS 240 RS RKS D+YTV GPWLVTADEI +P L+F + V+G+ RQ++NT DLIL V LI FAS Sbjct: 181 RSLRKSIDSYTVLGPWLVTADEIADPSGLEFELRVDGKTRQKANTRDLILNVRDLIVFAS 240 Query: 241 GFYTLEPGDIIITGTPEGVASIKPGDKMLARMEGIGEMAVAV 282 FYTL PGD+I+TGTPEGV I+PG+ M AR+EGIGEM V+V Sbjct: 241 AFYTLMPGDVILTGTPEGVGPIQPGNVMSARIEGIGEMNVSV 282 >ref|YP_982700.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Polaromonas naphthalenivorans CJ2] gb|AAZ93398.1| putative hydratase [Polaromonas naphthalenivorans CJ2] gb|ABM37779.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Polaromonas naphthalenivorans CJ2] Length = 289 Score = 351 bits (900), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 167/285 (58%), Positives = 214/285 (75%) Query: 1 MKICRFDDNRLGLVEGDVVRDVTVALEILPAHTYPFPRYDLLVANLPALVDRINALKSDA 60 MKICRFD++RLGLV+G+ VRDVT AL++LP H YP P +D L+A LP +++ I + + Sbjct: 1 MKICRFDNDRLGLVDGETVRDVTAALDVLPNHRYPLPIFDPLIALLPEVLEAIRRIAPSS 60 Query: 61 EVLPLSSVRLLSPVANPGKVIAAPVNYQKHLKEVLDDPNLHHDNQINHIERAGLFLKATS 120 LPL+ RLL+PVANPGKVIAAPVNY+KHL+E + +HH+NQ+ IE+ GLFLKATS Sbjct: 61 PTLPLAGRRLLAPVANPGKVIAAPVNYKKHLQEAREQVEIHHNNQVAEIEKIGLFLKATS 120 Query: 121 SVVGASEGVALRKLDRRNDHEVELAVVIGKRAANVSRADALNYVAGYCIGLDITIRGPEE 180 SVVG S GV ++ DRRNDHE EL VIGK N+ R A ++++ Y IGLD+T+RGP+E Sbjct: 121 SVVGPSHGVEIQHPDRRNDHEAELVAVIGKTGRNIPRERAFDHISAYTIGLDMTVRGPQE 180 Query: 181 RSFRKSPDTYTVFGPWLVTADEITEPGKLDFSIAVNGEIRQQSNTADLILGVEQLIEFAS 240 RS RKS DTY+V GPWLVTADEI +P LDF + VNGE RQ++NT DL+L + LIE AS Sbjct: 181 RSLRKSIDTYSVVGPWLVTADEIDDPQALDFWLTVNGERRQKANTRDLVLDIPALIEMAS 240 Query: 241 GFYTLEPGDIIITGTPEGVASIKPGDKMLARMEGIGEMAVAVRAA 285 +YTL+PGD++ TGTPEGV + GD++ + GIG M VAVR A Sbjct: 241 SYYTLQPGDLLFTGTPEGVGPVVNGDEITVEIAGIGRMNVAVRNA 285