BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0125.p (211 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01078221.1| isopropylmalate isomerase small subunit [Mari... 250 1e-64 ref|YP_001003377.1| 3-isopropylmalate dehydratase small subunit ... 243 1e-62 ref|YP_002004721.1| isopropylmalate isomerase small subunit [Cup... 243 2e-62 ref|ZP_08824995.1| 3-isopropylmalate dehydratase small subunit [... 242 2e-62 ref|ZP_01127950.1| 3-isopropylmalate dehydratase small subunit r... 242 3e-62 >ref|ZP_01078221.1| isopropylmalate isomerase small subunit [Marinomonas sp. MED121] gb|EAQ63599.1| isopropylmalate isomerase small subunit [Marinomonas sp. MED121] Length = 215 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 148/211 (70%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M FT GIVAPLD ANVDTD IIPKQ++KS+ + G GK LFDE RY+D G+P DC G Sbjct: 1 MRAFTQHQGIVAPLDLANVDTDMIIPKQFLKSIKRTGFGKNLFDELRYQDEGQPDQDCTG 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP R DFVLNLP++ +A VLLAR NFGCGSSREHA WAL D+G +V++APSF DIFF NC Sbjct: 61 RPLREDFVLNLPQFANASVLLARRNFGCGSSREHAPWALDDYGFRVVIAPSFADIFFNNC 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP++L+ E++EQLF+ + + G S S++L +Q+ + F++ K LL Sbjct: 121 FKNGLLPIQLSEEQVEQLFQEVNQASGYSLSIDLEEQVVVTPSGSRFSFDVDAFRKHCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 +G D+IG+TL I +YE R PW+F Sbjct: 181 NGLDDIGLTLQDQDAIKSYEAERQQSAPWLF 211 >ref|YP_001003377.1| 3-isopropylmalate dehydratase small subunit [Halorhodospira halophila SL1] gb|ABM62575.1| 3-isopropylmalate dehydratase, small subunit [Halorhodospira halophila SL1] Length = 240 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 116/212 (54%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M+ FT +G+VAPLD +NVDTDAIIPKQ++KSV + G G YLFDEWRY D GEPGMDC Sbjct: 26 MEPFTRHTGLVAPLDRSNVDTDAIIPKQFLKSVKRTGFGPYLFDEWRYLDRGEPGMDCTN 85 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RPR DFVLN P Y A VLLAR+NFGCGSSREHA WAL D+G + IVAPSF DIF++NC Sbjct: 86 RPRNEDFVLNQPRYQGASVLLARDNFGCGSSREHAPWALKDYGFRAIVAPSFADIFYSNC 145 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LPV L E +EQLF+ + G +++L +Q + + F++ K++LL Sbjct: 146 FKNGLLPVVLGEEVVEQLFQAVYATEGYQLTIDLFEQQVVTPGGERFGFDVDPFRKRMLL 205 Query: 181 HGGDEIGMTLSLSTQ-IDNYERSRAYREPWMF 211 G DEIG+TL ++ I YE+ R PW+F Sbjct: 206 EGLDEIGVTLEEQSEAIQAYEQRRLQEAPWLF 237 >ref|YP_002004721.1| isopropylmalate isomerase small subunit [Cupriavidus taiwanensis LMG 19424] emb|CAQ68652.1| 3-isopropylmalate isomerase, subunit with LeuC [Cupriavidus taiwanensis LMG 19424] Length = 212 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 142/211 (67%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M FT G+VAPLD ANVDTDAI+PKQ++KS+ + G G YLFDEWRY D GEPG DC Sbjct: 1 MKAFTTLDGLVAPLDRANVDTDAILPKQFLKSIRRSGFGPYLFDEWRYLDHGEPGQDCST 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP DFVLN P Y A +LLARENFGCGSSREHA WAL DFG++ ++APSF DIF+ NC Sbjct: 61 RPLNPDFVLNQPRYRGASILLARENFGCGSSREHAPWALEDFGLRALIAPSFADIFYNNC 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ A E +++LF + PG V+L+ Q D F L + LL Sbjct: 121 LKNGLLPIVAAPEVVDRLFAEVAATPGYRLKVDLATQQVITPAGDVIPFMLDSFKQHCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 +G D+I + L + QID YE++R REPW+F Sbjct: 181 NGLDDIALALRHAAQIDAYEQARRQREPWLF 211 >ref|ZP_08824995.1| 3-isopropylmalate dehydratase small subunit [Thiorhodococcus drewsii AZ1] gb|EGV28354.1| 3-isopropylmalate dehydratase small subunit [Thiorhodococcus drewsii AZ1] Length = 212 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 114/211 (54%), Positives = 144/211 (68%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M+ F NF+G+VAPLD AN+DTDAIIPKQ++KS+ + G G +LFDEWRY D GEPGMDC Sbjct: 1 MEAFKNFTGVVAPLDRANIDTDAIIPKQFLKSIQRTGFGPFLFDEWRYMDHGEPGMDCTN 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RPR +FVLN P + A++LLARENFGCGSSREHA WAL DFG +VI+APSF DIFF N Sbjct: 61 RPRNPEFVLNDPRFAQAQILLARENFGCGSSREHAPWALTDFGFRVILAPSFADIFFNNS 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ L ++ I+ LF +S SV+LS Q ++ FE+ +K LL Sbjct: 121 FKNGLLPIVLDAKVIDALFAKATGETPLSISVDLSAQTLTLDDGTCISFEVDAGSKHRLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 G D+IG+TL I YE R PW+F Sbjct: 181 EGLDDIGLTLQEVDLIRAYEERRRAETPWLF 211 >ref|ZP_01127950.1| 3-isopropylmalate dehydratase small subunit region [Nitrococcus mobilis Nb-231] gb|EAR21239.1| 3-isopropylmalate dehydratase small subunit region [Nitrococcus mobilis Nb-231] Length = 216 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 140/211 (66%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M GIVAP+D ANVDTDAIIPKQ++KS+ + G G LFDEWRY D GEPG DC Sbjct: 1 MQPLIRVEGIVAPIDRANVDTDAIIPKQFLKSIKRTGFGPNLFDEWRYLDHGEPGQDCAQ 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP+ +FVLN P Y A +LLAR NFGCGSSREHA WAL D+G +V++APSF +IF+ NC Sbjct: 61 RPKNPEFVLNQPRYQDASILLARRNFGCGSSREHAPWALKDYGFRVLIAPSFAEIFYNNC 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 T+NGILPV L+ E +EQLFR + G + V+L Q + + FE+ KQ LL Sbjct: 121 TKNGILPVVLSEEAVEQLFREVTASTGYTLEVDLPSQSVTTSAGEVFSFEIDTFRKQALL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 G DEIG+TL + +I YE R PW+F Sbjct: 181 DGLDEIGLTLQHAAEIQAYEARRRRETPWLF 211