BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0107.p (236 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_157769.1| LysR family transcriptional regulator [Aromatol... 219 4e-55 ref|YP_933923.1| putative LysR-type transcriptional regulator Na... 218 9e-55 ref|ZP_03698663.1| transcriptional regulator, LysR family [Lutie... 217 1e-54 ref|YP_004847278.1| LysR family transcriptional regulator [Pseud... 214 9e-54 ref|YP_004152700.1| LysR family transcriptional regulator [Vario... 206 2e-51 >ref|YP_157769.1| LysR family transcriptional regulator [Aromatoleum aromaticum EbN1] emb|CAI06868.1| transcriptional regulator, LysR family [Aromatoleum aromaticum EbN1] Length = 301 Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 147/214 (68%) Query: 21 GYQASFEPEKSERTFRICVTDVSQNVVVPGLMNALKVSGPHLRLSLINASDQTSTLMKTG 80 G++A F+P ++ RTFRI +TD+SQ V++P L L+ P + + + N S T+ ++++G Sbjct: 83 GHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTVAPGIHIDIANLSANTAGMLESG 142 Query: 81 EVDMAIGFIPVLDSDFRQERLFDEDFVCIASASHPRIGKSLTLAHFTNENHLIVTTSGTG 140 EVD+A+GF+P L++ F Q+ LF + +VC+ASA+HPRI + LTLA F E H +V+TSGTG Sbjct: 143 EVDVALGFMPQLEAGFYQQALFRQHYVCMASATHPRIRRGLTLAQFEAEEHAVVSTSGTG 202 Query: 141 HWIVSKTLDAKRITRKIALEVENFLGIGSIISQTDLIATVPRRFGESLAQTHPLKTYPSP 200 H I+ + + + I R++ L + +F+GI ++ +T L+ T+P+R GE LA L+ YP P Sbjct: 203 HLIIDREIARQDIKRRVVLRIPSFVGIAYVVERTALLVTIPQRLGELLADEERLRVYPVP 262 Query: 201 VVLPPYSVKQYWHERFDNDLSNRWLRNAIAHLFA 234 LP Y+VKQ+WH R++ND NRWLR I L + Sbjct: 263 FPLPEYAVKQHWHGRYNNDPGNRWLRALIQELLS 296 >ref|YP_933923.1| putative LysR-type transcriptional regulator NahR [Azoarcus sp. BH72] emb|CAL95036.1| putative LysR-type transcriptional regulator NahR [Azoarcus sp. BH72] Length = 302 Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 149/214 (69%) Query: 21 GYQASFEPEKSERTFRICVTDVSQNVVVPGLMNALKVSGPHLRLSLINASDQTSTLMKTG 80 G + +F+P ++R+FRIC+TD+SQ V++P L L+ + P +R+ + + S +T+ +++ G Sbjct: 83 GRRTAFDPSSAQRSFRICMTDISQLVLLPRLWAHLRATAPGIRIDIAHLSTETAKMLEAG 142 Query: 81 EVDMAIGFIPVLDSDFRQERLFDEDFVCIASASHPRIGKSLTLAHFTNENHLIVTTSGTG 140 E D+A+GFIP L++ F Q+ LF + +VC+A+A HPRI ++L+LA F E H +V++SGTG Sbjct: 143 EADLALGFIPQLEAGFYQQALFRQRYVCMANADHPRIRETLSLAQFEAEEHAVVSSSGTG 202 Query: 141 HWIVSKTLDAKRITRKIALEVENFLGIGSIISQTDLIATVPRRFGESLAQTHPLKTYPSP 200 H I+ + + + I+R++AL V NFLG+ ++ TDL+ T+P R E LA +T+P P Sbjct: 203 HLILDREIARQNISRRVALAVPNFLGVAFVVEHTDLLVTIPARLAEVLAGRGRFRTFPVP 262 Query: 201 VVLPPYSVKQYWHERFDNDLSNRWLRNAIAHLFA 234 LP Y+VKQ+WHER+ +D NRWLR I+ L + Sbjct: 263 FELPDYAVKQHWHERYHHDPGNRWLRRLISDLLS 296 >ref|ZP_03698663.1| transcriptional regulator, LysR family [Lutiella nitroferrum 2002] gb|EEG08657.1| transcriptional regulator, LysR family [Lutiella nitroferrum 2002] Length = 303 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 99/234 (42%), Positives = 152/234 (64%) Query: 1 LADILFSSVQKTLEQLEFTLGYQASFEPEKSERTFRICVTDVSQNVVVPGLMNALKVSGP 60 +A L +V++ L+ L+ G++ F+P SERTF I +TD+SQ V++P L L+ + P Sbjct: 63 MARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKTSP 122 Query: 61 HLRLSLINASDQTSTLMKTGEVDMAIGFIPVLDSDFRQERLFDEDFVCIASASHPRIGKS 120 + + ++ S +T +++TGE D+A+GF+P L++ F Q+ LF + +VC+AS HPRI Sbjct: 123 GVHIDIVPLSAETPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPRIHDE 182 Query: 121 LTLAHFTNENHLIVTTSGTGHWIVSKTLDAKRITRKIALEVENFLGIGSIISQTDLIATV 180 LTLA F E H +VT+SGTGH I+ + + + ITR IAL V N+LGI ++ QTD++ T+ Sbjct: 183 LTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDMLVTI 242 Query: 181 PRRFGESLAQTHPLKTYPSPVVLPPYSVKQYWHERFDNDLSNRWLRNAIAHLFA 234 P R + L + +P P LP Y+VKQ+WHER+ +D NRWLR I+ L + Sbjct: 243 PERLAQVLEGRGRFRVFPVPFELPDYAVKQHWHERYHHDPGNRWLRRVISDLLS 296 >ref|YP_004847278.1| LysR family transcriptional regulator [Pseudogulbenkiania sp. NH8B] dbj|BAK76864.1| transcriptional regulator, LysR family [Pseudogulbenkiania sp. NH8B] Length = 303 Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 98/234 (41%), Positives = 150/234 (64%) Query: 1 LADILFSSVQKTLEQLEFTLGYQASFEPEKSERTFRICVTDVSQNVVVPGLMNALKVSGP 60 +A L +V++ L+ L+ G++ F+P SERTF I +TD+SQ V++P L L+ + P Sbjct: 63 MARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKTSP 122 Query: 61 HLRLSLINASDQTSTLMKTGEVDMAIGFIPVLDSDFRQERLFDEDFVCIASASHPRIGKS 120 + + ++ S +T +++TGE D+A+GF+P L++ F Q+ LF + +VC+AS HPRI Sbjct: 123 GVHIDIVPLSTETPRMLETGEADLALGFMPQLEAGFYQQSLFRQRYVCVASTDHPRIHDE 182 Query: 121 LTLAHFTNENHLIVTTSGTGHWIVSKTLDAKRITRKIALEVENFLGIGSIISQTDLIATV 180 L L F E H +VT+SGTGH I+ + + + ITR IAL V N+LGI ++ QTD++ T+ Sbjct: 183 LPLTQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVEQTDMLVTI 242 Query: 181 PRRFGESLAQTHPLKTYPSPVVLPPYSVKQYWHERFDNDLSNRWLRNAIAHLFA 234 P R + L K +P P LP Y+VKQ+WHER+ +D NRWLR I+ L + Sbjct: 243 PERLAQVLEGRGRFKVFPVPFELPDYAVKQHWHERYHHDPGNRWLRRVISDLLS 296 >ref|YP_004152700.1| LysR family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU34589.1| transcriptional regulator, LysR family [Variovorax paradoxus EPS] Length = 298 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 96/235 (40%), Positives = 149/235 (63%) Query: 2 ADILFSSVQKTLEQLEFTLGYQASFEPEKSERTFRICVTDVSQNVVVPGLMNALKVSGPH 61 A+ ++ ++++ L QL G ++SFEP ++R FRIC+TD+S+ V++PGL++ L+ P Sbjct: 64 AERIYPNLREVLAQLAQAQGNRSSFEPAGAQRRFRICMTDISEVVLLPGLLDHLRHVAPG 123 Query: 62 LRLSLINASDQTSTLMKTGEVDMAIGFIPVLDSDFRQERLFDEDFVCIASASHPRIGKSL 121 + + S + ++ GEVD+A+GF+P LD+ F Q+ LF ++FVC+A+ +HPRIG L Sbjct: 124 VHIETEIISTNSGRRLQDGEVDLAVGFMPQLDAGFYQQTLFMQNFVCLAAQNHPRIGARL 183 Query: 122 TLAHFTNENHLIVTTSGTGHWIVSKTLDAKRITRKIALEVENFLGIGSIISQTDLIATVP 181 F E H +V+TSGTGH IV T+ + R + + + +FL + I++ T+L+ VP Sbjct: 184 ARKRFEAEAHAVVSTSGTGHAIVDTTIARLGLKRDVVVRLSSFLSVARIVAHTELLVVVP 243 Query: 182 RRFGESLAQTHPLKTYPSPVVLPPYSVKQYWHERFDNDLSNRWLRNAIAHLFAES 236 R G+ LA P+K P LP Y+VKQ+WHERF D N WLR +A LF+ S Sbjct: 244 RILGKVLATQEPVKLLELPFALPDYAVKQHWHERFHADPGNAWLRRTLAQLFSGS 298