BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0070.p         (69 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775559.1| secreted protein [Herbaspirillum seropedicae...    87   6e-16

>ref|YP_003775559.1| secreted protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63651.1| secreted protein [Herbaspirillum seropedicae SmR1]
          Length = 186

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 1/69 (1%)

Query: 2   GFEAVLCWNNRQRCWNVTNNASGSTGAFNGKDAARPFTLHYRVRGGGQLGP-PARGEMNQ 60
           GFEA+LCW +   CW+VT+  +GST  FNG+DA++PF L+YRVR    +G  P +GE+NQ
Sbjct: 118 GFEALLCWQDAGSCWHVTDANTGSTDFFNGRDASKPFQLYYRVRARAAVGEAPIKGEINQ 177

Query: 61  VIVTYDLPG 69
           VIVTY++PG
Sbjct: 178 VIVTYNIPG 186