BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0067.p         (88 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775561.1| oxidative stress resistance two component re...   174   5e-42
ref|YP_004752449.1| two-component system response regulator [Col...   170   5e-41
ref|YP_001100181.1| osmolarity response regulator [Herminiimonas...   169   9e-41
ref|YP_001353103.1| osmolarity response regulator [Janthinobacte...   169   9e-41
ref|ZP_08274750.1| Two-component system response regulator OmpR ...   164   5e-39

>ref|YP_003775561.1| oxidative stress resistance two component response regulator
           protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63653.1| oxidative stress resistance two component response regulator
           protein [Herbaspirillum seropedicae SmR1]
          Length = 253

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 84/88 (95%), Positives = 86/88 (97%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK G+T+ LTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL
Sbjct: 166 LKKNGDTISLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 225

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDPANPLYIQTVWGLGYVFIPEGKPR
Sbjct: 226 IEPDPANPLYIQTVWGLGYVFIPEGKPR 253


>ref|YP_004752449.1| two-component system response regulator [Collimonas fungivorans
           Ter331]
 gb|AEK61626.1| Two-component system response regulator [Collimonas fungivorans
           Ter331]
          Length = 251

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 81/88 (92%), Positives = 87/88 (98%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK GE++PLTTGEFSVLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKL
Sbjct: 164 LKKNGESIPLTTGEFSVLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKL 223

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDPA+PLYIQTVWGLGYVFIPEG+PR
Sbjct: 224 IEPDPASPLYIQTVWGLGYVFIPEGQPR 251


>ref|YP_001100181.1| osmolarity response regulator [Herminiimonas arsenicoxydans]
 emb|CAL62057.1| Transcriptional regulatory protein OmpR [Herminiimonas
           arsenicoxydans]
          Length = 255

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 85/88 (96%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK  ETVPLTTGEFSVLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKL
Sbjct: 168 LKKNDETVPLTTGEFSVLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKL 227

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDP+ PLYIQTVWGLGYVFIPEGKPR
Sbjct: 228 IEPDPSTPLYIQTVWGLGYVFIPEGKPR 255


>ref|YP_001353103.1| osmolarity response regulator [Janthinobacterium sp. Marseille]
 gb|ABR89667.1| oxidative stress resistance two-components response regulator
           [Janthinobacterium sp. Marseille]
          Length = 248

 Score =  169 bits (429), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 82/88 (93%), Positives = 85/88 (96%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK  ETVPLTTGEFSVLKVFAR+ARQPLSREKLME+ARGREYEVFDRSLDVQISRLRKL
Sbjct: 161 LKKNDETVPLTTGEFSVLKVFARHARQPLSREKLMELARGREYEVFDRSLDVQISRLRKL 220

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDP+ PLYIQTVWGLGYVFIPEGKPR
Sbjct: 221 IEPDPSTPLYIQTVWGLGYVFIPEGKPR 248


>ref|ZP_08274750.1| Two-component system response regulator OmpR [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31781.1| Two-component system response regulator OmpR [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 253

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/88 (89%), Positives = 85/88 (96%)

Query: 1   LKKKGETVPLTTGEFSVLKVFARNARQPLSREKLMEMARGREYEVFDRSLDVQISRLRKL 60
           LKK G +V LTTGEFSVLKVFAR+ARQPLSREKLMEMARGREYEV+DRSLDVQISRLRKL
Sbjct: 166 LKKSGVSVALTTGEFSVLKVFARHARQPLSREKLMEMARGREYEVYDRSLDVQISRLRKL 225

Query: 61  IEPDPANPLYIQTVWGLGYVFIPEGKPR 88
           IEPDP++PLYIQTVWGLGYVFIPEG+PR
Sbjct: 226 IEPDPSSPLYIQTVWGLGYVFIPEGQPR 253