BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0066.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775561.1| oxidative stress resistance two component re...   166   8e-40
ref|YP_004752449.1| two-component system response regulator [Col...   140   7e-32
ref|YP_001353103.1| osmolarity response regulator [Janthinobacte...   137   4e-31
ref|YP_001100181.1| osmolarity response regulator [Herminiimonas...   135   2e-30
ref|ZP_08274750.1| Two-component system response regulator OmpR ...   129   2e-28

>ref|YP_003775561.1| oxidative stress resistance two component response regulator
           protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63653.1| oxidative stress resistance two component response regulator
           protein [Herbaspirillum seropedicae SmR1]
          Length = 253

 Score =  166 bits (421), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 80/80 (100%), Positives = 80/80 (100%)

Query: 1   VDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRR 60
           VDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRR
Sbjct: 23  VDDDIRLRDLLRRYLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRR 82

Query: 61  LRGAGDQTPIIMLTAKGEDV 80
           LRGAGDQTPIIMLTAKGEDV
Sbjct: 83  LRGAGDQTPIIMLTAKGEDV 102


>ref|YP_004752449.1| two-component system response regulator [Collimonas fungivorans
           Ter331]
 gb|AEK61626.1| Two-component system response regulator [Collimonas fungivorans
           Ter331]
          Length = 251

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 66/67 (98%), Positives = 66/67 (98%)

Query: 14  YLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIML 73
           YLTEQGF VVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIML
Sbjct: 34  YLTEQGFQVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIML 93

Query: 74  TAKGEDV 80
           TAKGEDV
Sbjct: 94  TAKGEDV 100


>ref|YP_001353103.1| osmolarity response regulator [Janthinobacterium sp. Marseille]
 gb|ABR89667.1| oxidative stress resistance two-components response regulator
          [Janthinobacterium sp. Marseille]
          Length = 248

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 67/67 (100%)

Query: 14 YLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIML 73
          YL+EQGFNVVTAENAQAMNKLW+RERYDLLVLDLMLPGEDGL+ICRRLRGAGD+TPIIML
Sbjct: 31 YLSEQGFNVVTAENAQAMNKLWLRERYDLLVLDLMLPGEDGLSICRRLRGAGDKTPIIML 90

Query: 74 TAKGEDV 80
          TAKGEDV
Sbjct: 91 TAKGEDV 97


>ref|YP_001100181.1| osmolarity response regulator [Herminiimonas arsenicoxydans]
 emb|CAL62057.1| Transcriptional regulatory protein OmpR [Herminiimonas
           arsenicoxydans]
          Length = 255

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 67/67 (100%)

Query: 14  YLTEQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIML 73
           YL+EQGFNVVTAE+AQAMNKLW+RERYDLLVLDLMLPGEDGL+ICRRLRGAGD+TPIIML
Sbjct: 38  YLSEQGFNVVTAESAQAMNKLWLRERYDLLVLDLMLPGEDGLSICRRLRGAGDKTPIIML 97

Query: 74  TAKGEDV 80
           TAKGEDV
Sbjct: 98  TAKGEDV 104


>ref|ZP_08274750.1| Two-component system response regulator OmpR [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31781.1| Two-component system response regulator OmpR [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 253

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/64 (90%), Positives = 62/64 (96%)

Query: 17  EQGFNVVTAENAQAMNKLWIRERYDLLVLDLMLPGEDGLAICRRLRGAGDQTPIIMLTAK 76
           EQGFNV+TAEN+Q MNKLW+RERYDLLVLDLMLPGEDGL+ICRRLRGAGD TPIIMLTAK
Sbjct: 39  EQGFNVITAENSQTMNKLWLRERYDLLVLDLMLPGEDGLSICRRLRGAGDMTPIIMLTAK 98

Query: 77  GEDV 80
           GEDV
Sbjct: 99  GEDV 102